RNA–Protein interactions for RNA: ENST00000531430.5

NEDD8-206, Transcript of neural precursor cell expressed, developmentally down-regulated 8, humanhuman

TSL 2

Gene NEDD8, Length 651 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD8-206ENST00000531430 GANQ9H2C0 597 aa9.16□□□□□ -0.94
NEDD8-206ENST00000531430 OSGEPL1Q9H4B0 414 aa9.16□□□□□ -0.94
NEDD8-206ENST00000531430 NT5MQ9NPB1 228 aa9.16□□□□□ -0.94
NEDD8-206ENST00000531430 PADI1Q9ULC6 663 aa9.16□□□□□ -0.94
NEDD8-206ENST00000531430 OAS3Q9Y6K5 1087 aaKnown RBP9.16□□□□□ -0.94
NEDD8-206ENST00000531430 CENPEQ02224 2701 aa9.15□□□□□ -0.94
NEDD8-206ENST00000531430 PSMD11O00231 422 aa9.15□□□□□ -0.94
NEDD8-206ENST00000531430 EPHB6O15197 1021 aa9.15□□□□□ -0.94
NEDD8-206ENST00000531430 HTRA2O43464 458 aaPredicted RBP9.15□□□□□ -0.94
NEDD8-206ENST00000531430 SOCS5O75159 536 aa9.15□□□□□ -0.94
NEDD8-206ENST00000531430 SEMA7AO75326 666 aa9.15□□□□□ -0.94
NEDD8-206ENST00000531430 NDUFA10O95299 355 aa9.15□□□□□ -0.94
NEDD8-206ENST00000531430 PGLSO95336 258 aa9.15□□□□□ -0.94
NEDD8-206ENST00000531430 PDHA1P08559 390 aa9.15□□□□□ -0.94
NEDD8-206ENST00000531430 EEF1GP26641 437 aaKnown RBP9.15□□□□□ -0.94
NEDD8-206ENST00000531430 GFERP55789 205 aa9.15□□□□□ -0.94
NEDD8-206ENST00000531430 PTSQ03393 145 aa9.15□□□□□ -0.94
NEDD8-206ENST00000531430 LRP8Q14114 963 aa9.15□□□□□ -0.94
NEDD8-206ENST00000531430 MARC1Q5VT66 337 aa9.15□□□□□ -0.94
NEDD8-206ENST00000531430 LRRC66Q68CR7 880 aa9.15□□□□□ -0.94
NEDD8-206ENST00000531430 ZNF787Q6DD87 383 aa9.15□□□□□ -0.94
NEDD8-206ENST00000531430 CAPRIN2Q6IMN6 1127 aaKnown RBP9.15□□□□□ -0.94
NEDD8-206ENST00000531430 ACAD10Q6JQN1 1059 aa9.15□□□□□ -0.94
NEDD8-206ENST00000531430 ADAMTSL4Q6UY14 1074 aa9.15□□□□□ -0.94
NEDD8-206ENST00000531430 MON1BQ7L1V2 547 aa9.15□□□□□ -0.94
NEDD8-206ENST00000531430 TRIM48Q8IWZ4 208 aa9.15□□□□□ -0.94
NEDD8-206ENST00000531430 CBARPQ8N350 705 aaPredicted RBP9.15□□□□□ -0.94
NEDD8-206ENST00000531430 PGBD5Q8N414 524 aa9.15□□□□□ -0.94
NEDD8-206ENST00000531430 HSPH1Q92598 858 aa9.15□□□□□ -0.94
NEDD8-206ENST00000531430 SCARF2Q96GP6 870 aaPredicted RBP9.15□□□□□ -0.94
NEDD8-206ENST00000531430 MFRPQ9BY79 579 aa9.15□□□□□ -0.94
NEDD8-206ENST00000531430 ARFGAP3Q9NP61 516 aa9.15□□□□□ -0.94
NEDD8-206ENST00000531430 SARS2Q9NP81 518 aaKnown RBP9.15□□□□□ -0.94
NEDD8-206ENST00000531430 CWC15Q9P013 229 aaKnown RBP9.15□□□□□ -0.94
NEDD8-206ENST00000531430 LUZP4Q9P127 313 aa9.15□□□□□ -0.94
NEDD8-206ENST00000531430 CPNE7Q9UBL6 633 aa9.15□□□□□ -0.94
NEDD8-206ENST00000531430 KCND3Q9UK17 655 aa9.15□□□□□ -0.94
NEDD8-206ENST00000531430 TTLL3Q9Y4R7 772 aa9.15□□□□□ -0.94
NEDD8-206ENST00000531430 ESPL1Q14674 2120 aa9.14□□□□□ -0.95
NEDD8-206ENST00000531430 H3BRJ5 948 aa9.14□□□□□ -0.95
NEDD8-206ENST00000531430 ATMINO43313 823 aaPredicted RBP9.14□□□□□ -0.95
NEDD8-206ENST00000531430 SPAG6O75602 509 aa9.14□□□□□ -0.95
NEDD8-206ENST00000531430 CREG1O75629 220 aa9.14□□□□□ -0.95
NEDD8-206ENST00000531430 CLDN7O95471 211 aa9.14□□□□□ -0.95
NEDD8-206ENST00000531430 DLGAP3O95886 979 aa9.14□□□□□ -0.95
NEDD8-206ENST00000531430 VIPP01282 170 aa9.14□□□□□ -0.95
NEDD8-206ENST00000531430 PDGFAP04085 211 aa9.14□□□□□ -0.95
NEDD8-206ENST00000531430 SLC2A4P14672 509 aa9.14□□□□□ -0.95
NEDD8-206ENST00000531430 TEAD1P28347 426 aa9.14□□□□□ -0.95
NEDD8-206ENST00000531430 MIPP30301 263 aa9.14□□□□□ -0.95
NEDD8-206ENST00000531430 HSPA9P38646 679 aaKnown RBP9.14□□□□□ -0.95
NEDD8-206ENST00000531430 ARL4AP40617 200 aa9.14□□□□□ -0.95
NEDD8-206ENST00000531430 MMP13P45452 471 aa9.14□□□□□ -0.95
NEDD8-206ENST00000531430 JAM2P57087 298 aa9.14□□□□□ -0.95
NEDD8-206ENST00000531430 DPTQ07507 201 aa9.14□□□□□ -0.95
NEDD8-206ENST00000531430 CHAF1BQ13112 559 aa9.14□□□□□ -0.95
NEDD8-206ENST00000531430 SEPT7Q16181 437 aaKnown RBP9.14□□□□□ -0.95
NEDD8-206ENST00000531430 NADK2Q4G0N4 442 aa9.14□□□□□ -0.95
NEDD8-206ENST00000531430 ZNF648Q5T619 568 aaPredicted RBP9.14□□□□□ -0.95
NEDD8-206ENST00000531430 CACHD1Q5VU97 1274 aa9.14□□□□□ -0.95
NEDD8-206ENST00000531430 FAM92BQ6ZTR7 304 aa9.14□□□□□ -0.95
NEDD8-206ENST00000531430 LYSMD3Q7Z3D4 306 aa9.14□□□□□ -0.95
NEDD8-206ENST00000531430 MCOLN2Q8IZK6 566 aa9.14□□□□□ -0.95
NEDD8-206ENST00000531430 GALNT11Q8NCW6 608 aa9.14□□□□□ -0.95
NEDD8-206ENST00000531430 PIH1D2Q8WWB5 315 aa9.14□□□□□ -0.95
NEDD8-206ENST00000531430 ZNF653Q96CK0 615 aa9.14□□□□□ -0.95
NEDD8-206ENST00000531430 C9orf72Q96LT7 481 aa9.14□□□□□ -0.95
NEDD8-206ENST00000531430 ZNF599Q96NL3 588 aa9.14□□□□□ -0.95
NEDD8-206ENST00000531430 PEBP4Q96S96 227 aa9.14□□□□□ -0.95
NEDD8-206ENST00000531430 SLC25A23Q9BV35 468 aa9.14□□□□□ -0.95
NEDD8-206ENST00000531430 TRIM55Q9BYV6 548 aa9.14□□□□□ -0.95
NEDD8-206ENST00000531430 ZWILCHQ9H900 591 aa9.14□□□□□ -0.95
NEDD8-206ENST00000531430 SLAMF7Q9NQ25 335 aa9.14□□□□□ -0.95
NEDD8-206ENST00000531430 ACSS2Q9NR19 701 aa9.14□□□□□ -0.95
NEDD8-206ENST00000531430 KLC4Q9NSK0 619 aa9.14□□□□□ -0.95
NEDD8-206ENST00000531430 PARVAQ9NVD7 372 aa9.14□□□□□ -0.95
NEDD8-206ENST00000531430 TRIM10Q9UDY6 481 aa9.14□□□□□ -0.95
NEDD8-206ENST00000531430 CHKBQ9Y259 395 aa9.14□□□□□ -0.95
NEDD8-206ENST00000531430 DNAJC16Q9Y2G8 782 aa9.14□□□□□ -0.95
NEDD8-206ENST00000531430 PCYT1BQ9Y5K3 369 aaPredicted RBP9.14□□□□□ -0.95
NEDD8-206ENST00000531430 PRRC2CQ9Y520 2896 aaKnown RBP9.13□□□□□ -0.95
NEDD8-206ENST00000531430 TCRBV5S1A1TA0A578 114 aa9.13□□□□□ -0.95
NEDD8-206ENST00000531430 ARGFXA6NJG6 315 aa9.13□□□□□ -0.95
NEDD8-206ENST00000531430 OR5K4A6NMS3 321 aa9.13□□□□□ -0.95
NEDD8-206ENST00000531430 PDZK1P1A8MUH7 402 aa9.13□□□□□ -0.95
NEDD8-206ENST00000531430 EIF3CLB5ME19 914 aaKnown RBP9.13□□□□□ -0.95
NEDD8-206ENST00000531430 GRID2O43424 1007 aa9.13□□□□□ -0.95
NEDD8-206ENST00000531430 KIF1CO43896 1103 aaKnown RBP9.13□□□□□ -0.95
NEDD8-206ENST00000531430 DNAJC6O75061 913 aa9.13□□□□□ -0.95
NEDD8-206ENST00000531430 UBXN7O94888 489 aa9.13□□□□□ -0.95
NEDD8-206ENST00000531430 SOD1P00441 154 aa9.13□□□□□ -0.95
NEDD8-206ENST00000531430 PYGLP06737 847 aa9.13□□□□□ -0.95
NEDD8-206ENST00000531430 F3P13726 295 aa9.13□□□□□ -0.95
NEDD8-206ENST00000531430 CDK11BP21127 795 aaKnown RBP9.13□□□□□ -0.95
NEDD8-206ENST00000531430 LEPRP48357 1165 aaKnown RBP9.13□□□□□ -0.95
NEDD8-206ENST00000531430 ARL4DP49703 201 aa9.13□□□□□ -0.95
NEDD8-206ENST00000531430 PGDP52209 483 aa9.13□□□□□ -0.95
NEDD8-206ENST00000531430 EPHA4P54764 986 aa9.13□□□□□ -0.95
NEDD8-206ENST00000531430 GSCP56915 257 aaPredicted RBP9.13□□□□□ -0.95
NEDD8-206ENST00000531430 UBE2HP62256 183 aa9.13□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 46.2 ms