RNA–Protein interactions for RNA: ENST00000530893.6

BRCA2-204, Transcript of BRCA2, DNA repair associated, humanhuman

TSL 1 (best)

Gene BRCA2, Length 2,011 nt, Biotype processed transcript, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA2-204ENST00000530893 CBX4O00257 560 aa17.11■□□□□ 0.33
BRCA2-204ENST00000530893 ECI2O75521 394 aa17.11■□□□□ 0.33
BRCA2-204ENST00000530893 HMGA1P17096 107 aaKnown RBP17.11■□□□□ 0.33
BRCA2-204ENST00000530893 SLC7A1P30825 629 aa17.11■□□□□ 0.33
BRCA2-204ENST00000530893 OR1D2P34982 312 aa17.11■□□□□ 0.33
BRCA2-204ENST00000530893 PPP3CCP48454 512 aa17.11■□□□□ 0.33
BRCA2-204ENST00000530893 ALDH7A1P49419 539 aaKnown RBP17.11■□□□□ 0.33
BRCA2-204ENST00000530893 CCNHP51946 323 aaPredicted RBP17.11■□□□□ 0.33
BRCA2-204ENST00000530893 PTPRNQ16849 979 aa17.11■□□□□ 0.33
BRCA2-204ENST00000530893 MAP7D1Q3KQU3 841 aa17.11■□□□□ 0.33
BRCA2-204ENST00000530893 INO80DQ53TQ3 878 aaPredicted RBP17.11■□□□□ 0.33
BRCA2-204ENST00000530893 ARPINQ7Z6K5 226 aa17.11■□□□□ 0.33
BRCA2-204ENST00000530893 MINDY1Q8N5J2 469 aa17.11■□□□□ 0.33
BRCA2-204ENST00000530893 LPCAT1Q8NF37 534 aa17.11■□□□□ 0.33
BRCA2-204ENST00000530893 OR9I1Q8NGQ6 314 aa17.11■□□□□ 0.33
BRCA2-204ENST00000530893 BCL7CQ8WUZ0 217 aaPredicted RBP17.11■□□□□ 0.33
BRCA2-204ENST00000530893 TBRG4Q969Z0 631 aaKnown RBP eCLIP17.11■□□□□ 0.33
BRCA2-204ENST00000530893 FUBP1Q96AE4 644 aaKnown RBP17.11■□□□□ 0.33
BRCA2-204ENST00000530893 GPR21Q99679 349 aa17.11■□□□□ 0.33
BRCA2-204ENST00000530893 CCT7Q99832 543 aa17.11■□□□□ 0.33
BRCA2-204ENST00000530893 GPATCH1Q9BRR8 931 aaKnown RBP17.11■□□□□ 0.33
BRCA2-204ENST00000530893 NDUFA13Q9P0J0 144 aa17.11■□□□□ 0.33
BRCA2-204ENST00000530893 STOML2Q9UJZ1 356 aa17.11■□□□□ 0.33
BRCA2-204ENST00000530893 ADAM12O43184 909 aa17.11■□□□□ 0.33
BRCA2-204ENST00000530893 RNASEH2AO75792 299 aaKnown RBP17.11■□□□□ 0.33
BRCA2-204ENST00000530893 LATS1O95835 1130 aa17.11■□□□□ 0.33
BRCA2-204ENST00000530893 INHAP05111 366 aa17.11■□□□□ 0.33
BRCA2-204ENST00000530893 PRSS56P0CW18 603 aa17.11■□□□□ 0.33
BRCA2-204ENST00000530893 HDCP19113 662 aa17.11■□□□□ 0.33
BRCA2-204ENST00000530893 FOXM1Q08050 763 aa17.11■□□□□ 0.33
BRCA2-204ENST00000530893 TSNQ15631 228 aaKnown RBP17.11■□□□□ 0.33
BRCA2-204ENST00000530893 IL23RQ5VWK5 629 aa17.11■□□□□ 0.33
BRCA2-204ENST00000530893 SPATA19Q7Z5L4 167 aa17.11■□□□□ 0.33
BRCA2-204ENST00000530893 HERC6Q8IVU3 1022 aa17.11■□□□□ 0.33
BRCA2-204ENST00000530893 DDIASQ8IXT1 998 aa17.11■□□□□ 0.33
BRCA2-204ENST00000530893 KCNJ9Q92806 393 aa17.11■□□□□ 0.33
BRCA2-204ENST00000530893 ATP6V1E2Q96A05 226 aa17.11■□□□□ 0.33
BRCA2-204ENST00000530893 TUBGCP3Q96CW5 907 aa17.11■□□□□ 0.33
BRCA2-204ENST00000530893 TRMT2BQ96GJ1 504 aaKnown RBP17.11■□□□□ 0.33
BRCA2-204ENST00000530893 EXOC2Q96KP1 924 aa17.11■□□□□ 0.33
BRCA2-204ENST00000530893 UHRF1Q96T88 793 aaPredicted RBP17.11■□□□□ 0.33
BRCA2-204ENST00000530893 PCDHAC1Q9H158 963 aa17.11■□□□□ 0.33
BRCA2-204ENST00000530893 MUC3BQ9H195 1237 aa17.11■□□□□ 0.33
BRCA2-204ENST00000530893 ABCD2Q9UBJ2 740 aa17.11■□□□□ 0.33
BRCA2-204ENST00000530893 TRMT6Q9UJA5 497 aaKnown RBP17.11■□□□□ 0.33
BRCA2-204ENST00000530893 AP4B1Q9Y6B7 739 aa17.11■□□□□ 0.33
BRCA2-204ENST00000530893 PPP6CO00743 305 aa17.1■□□□□ 0.33
BRCA2-204ENST00000530893 ANGPT2O15123 496 aa17.1■□□□□ 0.33
BRCA2-204ENST00000530893 CHEK2O96017 543 aa17.1■□□□□ 0.33
BRCA2-204ENST00000530893 MT-CO1P00395 513 aa17.1■□□□□ 0.33
BRCA2-204ENST00000530893 PABPC4LP0CB38 370 aaKnown RBP17.1■□□□□ 0.33
BRCA2-204ENST00000530893 MC4RP32245 332 aa17.1■□□□□ 0.33
BRCA2-204ENST00000530893 FOXA1P55317 472 aa17.1■□□□□ 0.33
BRCA2-204ENST00000530893 IL2P60568 153 aa17.1■□□□□ 0.33
BRCA2-204ENST00000530893 CXorf57Q6NSI4 855 aaKnown RBP17.1■□□□□ 0.33
BRCA2-204ENST00000530893 UGT3A1Q6NUS8 523 aa17.1■□□□□ 0.33
BRCA2-204ENST00000530893 RNF168Q8IYW5 571 aaPredicted RBP17.1■□□□□ 0.33
BRCA2-204ENST00000530893 STK40Q8N2I9 435 aa17.1■□□□□ 0.33
BRCA2-204ENST00000530893 GOLM1Q8NBJ4 401 aa17.1■□□□□ 0.33
BRCA2-204ENST00000530893 CD99L2Q8TCZ2 262 aa17.1■□□□□ 0.33
BRCA2-204ENST00000530893 ZNF483Q8TF39 744 aaPredicted RBP17.1■□□□□ 0.33
BRCA2-204ENST00000530893 ZUFSPQ96AP4 578 aa17.1■□□□□ 0.33
BRCA2-204ENST00000530893 NSUN5Q96P11 429 aaKnown RBP17.1■□□□□ 0.33
BRCA2-204ENST00000530893 TUBB1Q9H4B7 451 aa17.1■□□□□ 0.33
BRCA2-204ENST00000530893 TMEM45AQ9NWC5 275 aa17.1■□□□□ 0.33
BRCA2-204ENST00000530893 GID8Q9NWU2 228 aa17.1■□□□□ 0.33
BRCA2-204ENST00000530893 PLK2Q9NYY3 685 aa17.1■□□□□ 0.33
BRCA2-204ENST00000530893 POLG2Q9UHN1 485 aa17.1■□□□□ 0.33
BRCA2-204ENST00000530893 LOC101059915A0A1B0GWI6 518 aaPredicted RBP17.09■□□□□ 0.33
BRCA2-204ENST00000530893 GOLGA8CPA6NN73 597 aa17.09■□□□□ 0.33
BRCA2-204ENST00000530893 BTN3A1O00481 513 aa17.09■□□□□ 0.33
BRCA2-204ENST00000530893 STX7O15400 261 aaKnown RBP17.09■□□□□ 0.33
BRCA2-204ENST00000530893 MAP3K13O43283 966 aa17.09■□□□□ 0.33
BRCA2-204ENST00000530893 CRCPO75575 148 aa17.09■□□□□ 0.33
BRCA2-204ENST00000530893 ESRRBO95718 433 aa17.09■□□□□ 0.33
BRCA2-204ENST00000530893 ESR1P03372 595 aa17.09■□□□□ 0.33
BRCA2-204ENST00000530893 PRR35P0CG20 571 aa17.09■□□□□ 0.33
BRCA2-204ENST00000530893 HGFP14210 728 aa17.09■□□□□ 0.33
BRCA2-204ENST00000530893 PTGER3P43115 390 aa17.09■□□□□ 0.33
BRCA2-204ENST00000530893 SLC7A2P52569 658 aa17.09■□□□□ 0.33
BRCA2-204ENST00000530893 ATXN3P54252 364 aaPredicted RBP17.09■□□□□ 0.33
BRCA2-204ENST00000530893 ARF5P84085 180 aa17.09■□□□□ 0.33
BRCA2-204ENST00000530893 C6orf10Q5SRN2 563 aa17.09■□□□□ 0.33
BRCA2-204ENST00000530893 RNF219Q5W0B1 726 aaPredicted RBP17.09■□□□□ 0.33
BRCA2-204ENST00000530893 TPGS2Q68CL5 300 aa17.09■□□□□ 0.33
BRCA2-204ENST00000530893 SLC30A9Q6PML9 568 aa17.09■□□□□ 0.33
BRCA2-204ENST00000530893 DHFR2Q86XF0 187 aa17.09■□□□□ 0.33
BRCA2-204ENST00000530893 ZNF461Q8TAF7 563 aa17.09■□□□□ 0.33
BRCA2-204ENST00000530893 EME1Q96AY2 570 aa17.09■□□□□ 0.33
BRCA2-204ENST00000530893 KLF16Q9BXK1 252 aaPredicted RBP17.09■□□□□ 0.33
BRCA2-204ENST00000530893 TRIM15Q9C019 465 aa17.09■□□□□ 0.33
BRCA2-204ENST00000530893 EPB41L1Q9H4G0 881 aa17.09■□□□□ 0.33
BRCA2-204ENST00000530893 PAPOLBQ9NRJ5 636 aaKnown RBP17.09■□□□□ 0.33
BRCA2-204ENST00000530893 PCDHGC4Q9Y5F7 938 aa17.09■□□□□ 0.33
BRCA2-204ENST00000530893 HTTP42858 3142 aa17.09■□□□□ 0.33
BRCA2-204ENST00000530893 SMIM31A0A1B0GVY4 71 aa17.09■□□□□ 0.33
BRCA2-204ENST00000530893 LRRC14BA6NHZ5 514 aa17.09■□□□□ 0.33
BRCA2-204ENST00000530893 UROSP10746 265 aa17.09■□□□□ 0.33
BRCA2-204ENST00000530893 SGSHP51688 502 aa17.09■□□□□ 0.33
BRCA2-204ENST00000530893 RALGDSQ12967 914 aa17.09■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms