RNA–Protein interactions for RNA: ENST00000528787.1

SSBP3-211, Transcript of single stranded DNA binding protein 3, humanhuman

TSL 4

Gene SSBP3, Length 577 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-211ENST00000528787 ANKRD22Q5VYY1 191 aa7.88□□□□□ -1.15
SSBP3-211ENST00000528787 LRRC8EQ6NSJ5 796 aa7.88□□□□□ -1.15
SSBP3-211ENST00000528787 NEPROQ6NW34 567 aa7.88□□□□□ -1.15
SSBP3-211ENST00000528787 PACS1Q6VY07 963 aa7.88□□□□□ -1.15
SSBP3-211ENST00000528787 CCNI2Q6ZMN8 369 aaPredicted RBP7.88□□□□□ -1.15
SSBP3-211ENST00000528787 MACC1Q6ZN28 852 aa7.88□□□□□ -1.15
SSBP3-211ENST00000528787 C3orf62Q6ZUJ4 267 aa7.88□□□□□ -1.15
SSBP3-211ENST00000528787 ZNF534Q76KX8 674 aa7.88□□□□□ -1.15
SSBP3-211ENST00000528787 TAS2R42Q7RTR8 314 aa7.88□□□□□ -1.15
SSBP3-211ENST00000528787 ABI3BPQ7Z7G0 1075 aa7.88□□□□□ -1.15
SSBP3-211ENST00000528787 TSPAN33Q86UF1 283 aa7.88□□□□□ -1.15
SSBP3-211ENST00000528787 KCNMB4Q86W47 210 aa7.88□□□□□ -1.15
SSBP3-211ENST00000528787 PARGQ86W56 976 aa7.88□□□□□ -1.15
SSBP3-211ENST00000528787 TMEFF1Q8IYR6 380 aa7.88□□□□□ -1.15
SSBP3-211ENST00000528787 TP53I13Q8NBR0 393 aaPredicted RBP7.88□□□□□ -1.15
SSBP3-211ENST00000528787 TMEM145Q8NBT3 493 aa7.88□□□□□ -1.15
SSBP3-211ENST00000528787 FBXO36Q8NEA4 188 aa7.88□□□□□ -1.15
SSBP3-211ENST00000528787 GLYATL1Q969I3 302 aa7.88□□□□□ -1.15
SSBP3-211ENST00000528787 ERLEC1Q96DZ1 483 aa7.88□□□□□ -1.15
SSBP3-211ENST00000528787 CERS2Q96G23 380 aa7.88□□□□□ -1.15
SSBP3-211ENST00000528787 DNAJC1Q96KC8 554 aaKnown RBP7.88□□□□□ -1.15
SSBP3-211ENST00000528787 WDR92Q96MX6 357 aa7.88□□□□□ -1.15
SSBP3-211ENST00000528787 RIOK2Q9BVS4 552 aaKnown RBP7.88□□□□□ -1.15
SSBP3-211ENST00000528787 TEX101Q9BY14 249 aa7.88□□□□□ -1.15
SSBP3-211ENST00000528787 CLPBQ9H078 707 aa7.88□□□□□ -1.15
SSBP3-211ENST00000528787 MIR1-1HGQ9H1L0 117 aa7.88□□□□□ -1.15
SSBP3-211ENST00000528787 ABCG8Q9H221 673 aa7.88□□□□□ -1.15
SSBP3-211ENST00000528787 ACBD3Q9H3P7 528 aa7.88□□□□□ -1.15
SSBP3-211ENST00000528787 IL26Q9NPH9 171 aa7.88□□□□□ -1.15
SSBP3-211ENST00000528787 CHRAC1Q9NRG0 131 aa7.88□□□□□ -1.15
SSBP3-211ENST00000528787 TREX1Q9NSU2 369 aa7.88□□□□□ -1.15
SSBP3-211ENST00000528787 C20orf96Q9NUD7 363 aaPredicted RBP7.88□□□□□ -1.15
SSBP3-211ENST00000528787 NCKIPSDQ9NZQ3 722 aa7.88□□□□□ -1.15
SSBP3-211ENST00000528787 FETUBQ9UGM5 382 aa7.88□□□□□ -1.15
SSBP3-211ENST00000528787 EIF2B4Q9UI10 523 aaKnown RBP7.88□□□□□ -1.15
SSBP3-211ENST00000528787 GNPTGQ9UJJ9 305 aa7.88□□□□□ -1.15
SSBP3-211ENST00000528787 PILRBQ9UKJ0 227 aa7.88□□□□□ -1.15
SSBP3-211ENST00000528787 RAB21Q9UL25 225 aa7.88□□□□□ -1.15
SSBP3-211ENST00000528787 NFU1Q9UMS0 254 aa7.88□□□□□ -1.15
SSBP3-211ENST00000528787 SPO11Q9Y5K1 396 aa7.88□□□□□ -1.15
SSBP3-211ENST00000528787 A0A0C4DFX4 3053 aa7.88□□□□□ -1.15
SSBP3-211ENST00000528787 RALGAPA1Q6GYQ0 2036 aa7.88□□□□□ -1.15
SSBP3-211ENST00000528787 TCRBV7S3A2A0A539 114 aa7.87□□□□□ -1.15
SSBP3-211ENST00000528787 ANTXRLA6NF34 631 aa7.87□□□□□ -1.15
SSBP3-211ENST00000528787 NEMP2A6NFY4 417 aa7.87□□□□□ -1.15
SSBP3-211ENST00000528787 AGAP14A8MT82 685 aa7.87□□□□□ -1.15
SSBP3-211ENST00000528787 C10orf142B7Z368 130 aa7.87□□□□□ -1.15
SSBP3-211ENST00000528787 TLR4O00206 839 aa7.87□□□□□ -1.15
SSBP3-211ENST00000528787 PLK4O00444 970 aa7.87□□□□□ -1.15
SSBP3-211ENST00000528787 KHNYNO15037 678 aaKnown RBP7.87□□□□□ -1.15
SSBP3-211ENST00000528787 KMOO15229 486 aa7.87□□□□□ -1.15
SSBP3-211ENST00000528787 HRO43593 1189 aa7.87□□□□□ -1.15
SSBP3-211ENST00000528787 KDM1AO60341 852 aa7.87□□□□□ -1.15
SSBP3-211ENST00000528787 AVILO75366 819 aa7.87□□□□□ -1.15
SSBP3-211ENST00000528787 EPN2O95208 641 aa7.87□□□□□ -1.15
SSBP3-211ENST00000528787 RASGRP1O95267 797 aa7.87□□□□□ -1.15
SSBP3-211ENST00000528787 VAPBO95292 243 aa7.87□□□□□ -1.15
SSBP3-211ENST00000528787 ASMTLO95671 621 aa7.87□□□□□ -1.15
SSBP3-211ENST00000528787 LMNAP02545 664 aaKnown RBP7.87□□□□□ -1.15
SSBP3-211ENST00000528787 ESR1P03372 595 aa7.87□□□□□ -1.15
SSBP3-211ENST00000528787 PCCBP05166 539 aa7.87□□□□□ -1.15
SSBP3-211ENST00000528787 OR56A5P0C7T3 313 aa7.87□□□□□ -1.15
SSBP3-211ENST00000528787 PIRTP0C851 137 aa7.87□□□□□ -1.15
SSBP3-211ENST00000528787 THEGLP0DJG4 465 aa7.87□□□□□ -1.15
SSBP3-211ENST00000528787 ACRV1P26436 265 aa7.87□□□□□ -1.15
SSBP3-211ENST00000528787 NBL1P41271 181 aa7.87□□□□□ -1.15
SSBP3-211ENST00000528787 GRIA1P42261 906 aa7.87□□□□□ -1.15
SSBP3-211ENST00000528787 SKIV2L2P42285 1042 aaKnown RBP7.87□□□□□ -1.15
SSBP3-211ENST00000528787 CARSP49589 748 aaKnown RBP7.87□□□□□ -1.15
SSBP3-211ENST00000528787 SERPINB9P50453 376 aa7.87□□□□□ -1.15
SSBP3-211ENST00000528787 PMS2P54278 862 aa7.87□□□□□ -1.15
SSBP3-211ENST00000528787 EIF3BP55884 814 aaKnown RBP7.87□□□□□ -1.15
SSBP3-211ENST00000528787 HNRNPKP61978 463 aaKnown RBP eCLIP7.87□□□□□ -1.15
SSBP3-211ENST00000528787 PPP2CBP62714 309 aa7.87□□□□□ -1.15
SSBP3-211ENST00000528787 PPP2CAP67775 309 aa7.87□□□□□ -1.15
SSBP3-211ENST00000528787 CDK3Q00526 305 aa7.87□□□□□ -1.15
SSBP3-211ENST00000528787 IHHQ14623 411 aa7.87□□□□□ -1.15
SSBP3-211ENST00000528787 INPP5AQ14642 412 aa7.87□□□□□ -1.15
SSBP3-211ENST00000528787 SUZ12Q15022 739 aaKnown RBP7.87□□□□□ -1.15
SSBP3-211ENST00000528787 IRF4Q15306 451 aa7.87□□□□□ -1.15
SSBP3-211ENST00000528787 TMED2Q15363 201 aa7.87□□□□□ -1.15
SSBP3-211ENST00000528787 ERCC6LQ2NKX8 1250 aa7.87□□□□□ -1.15
SSBP3-211ENST00000528787 WSCD2Q2TBF2 565 aa7.87□□□□□ -1.15
SSBP3-211ENST00000528787 LRRC73Q5JTD7 316 aa7.87□□□□□ -1.15
SSBP3-211ENST00000528787 FNBP1LQ5T0N5 605 aa7.87□□□□□ -1.15
SSBP3-211ENST00000528787 STEAP4Q687X5 459 aa7.87□□□□□ -1.15
SSBP3-211ENST00000528787 SEL1L3Q68CR1 1132 aa7.87□□□□□ -1.15
SSBP3-211ENST00000528787 ZDHHC24Q6UX98 284 aa7.87□□□□□ -1.15
SSBP3-211ENST00000528787 FAM151BQ6UXP7 276 aa7.87□□□□□ -1.15
SSBP3-211ENST00000528787 PTAR1Q7Z6K3 402 aaPredicted RBP7.87□□□□□ -1.15
SSBP3-211ENST00000528787 HEATR4Q86WZ0 1026 aa7.87□□□□□ -1.15
SSBP3-211ENST00000528787 NXPE1Q8N323 547 aa7.87□□□□□ -1.15
SSBP3-211ENST00000528787 FSTL5Q8N475 847 aaPredicted RBP7.87□□□□□ -1.15
SSBP3-211ENST00000528787 DDHD1Q8NEL9 900 aa7.87□□□□□ -1.15
SSBP3-211ENST00000528787 MYRIPQ8NFW9 859 aa7.87□□□□□ -1.15
SSBP3-211ENST00000528787 OR56A4Q8NGH8 313 aa7.87□□□□□ -1.15
SSBP3-211ENST00000528787 OR13J1Q8NGT2 312 aa7.87□□□□□ -1.15
SSBP3-211ENST00000528787 CAVIN3Q969G5 261 aa7.87□□□□□ -1.15
SSBP3-211ENST00000528787 HDAC10Q969S8 669 aa7.87□□□□□ -1.15
SSBP3-211ENST00000528787 VOPP1Q96AW1 172 aa7.87□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms