RNA–Protein interactions for RNA: ENST00000528396.5

CAPN1-215, Transcript of calpain 1, humanhuman

TSL 4

Gene CAPN1, Length 571 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-215ENST00000528396 BPIP17213 487 aa13.28□□□□□ -0.28
CAPN1-215ENST00000528396 HMGCLP35914 325 aa13.28□□□□□ -0.28
CAPN1-215ENST00000528396 SPAM1P38567 509 aa13.28□□□□□ -0.28
CAPN1-215ENST00000528396 GDF10P55107 478 aa13.28□□□□□ -0.28
CAPN1-215ENST00000528396 PDE1BQ01064 536 aa13.28□□□□□ -0.28
CAPN1-215ENST00000528396 LRP8Q14114 963 aa13.28□□□□□ -0.28
CAPN1-215ENST00000528396 SPARCL1Q14515 664 aa13.28□□□□□ -0.28
CAPN1-215ENST00000528396 GSE1Q14687 1217 aa13.28□□□□□ -0.28
CAPN1-215ENST00000528396 HES3Q5TGS1 186 aa13.28□□□□□ -0.28
CAPN1-215ENST00000528396 KCTD16Q68DU8 428 aa13.28□□□□□ -0.28
CAPN1-215ENST00000528396 SLC30A9Q6PML9 568 aa13.28□□□□□ -0.28
CAPN1-215ENST00000528396 SLC35F3Q8IY50 421 aa13.28□□□□□ -0.28
CAPN1-215ENST00000528396 KYQ8NBH2 561 aa13.28□□□□□ -0.28
CAPN1-215ENST00000528396 GPR26Q8NDV2 337 aa13.28□□□□□ -0.28
CAPN1-215ENST00000528396 TTC25Q96NG3 672 aa13.28□□□□□ -0.28
CAPN1-215ENST00000528396 SYNDIG1Q9H7V2 258 aa13.28□□□□□ -0.28
CAPN1-215ENST00000528396 HOMER3Q9NSC5 361 aa13.28□□□□□ -0.28
CAPN1-215ENST00000528396 VPS18Q9P253 973 aa13.28□□□□□ -0.28
CAPN1-215ENST00000528396 NFKBIL1Q9UBC1 381 aaPredicted RBP13.28□□□□□ -0.28
CAPN1-215ENST00000528396 ZKSCAN5Q9Y2L8 839 aa13.28□□□□□ -0.28
CAPN1-215ENST00000528396 GLYATL1P3A0A0U1RQE8 302 aa13.27□□□□□ -0.29
CAPN1-215ENST00000528396 FAM149AA5PLN7 773 aa13.27□□□□□ -0.29
CAPN1-215ENST00000528396 FADS2P1A8MWK0 482 aa13.27□□□□□ -0.29
CAPN1-215ENST00000528396 BUD23O43709 281 aaKnown RBP13.27□□□□□ -0.29
CAPN1-215ENST00000528396 LPOP22079 712 aaPredicted RBP13.27□□□□□ -0.29
CAPN1-215ENST00000528396 ADCY8P40145 1251 aa13.27□□□□□ -0.29
CAPN1-215ENST00000528396 ACTR1BP42025 376 aa13.27□□□□□ -0.29
CAPN1-215ENST00000528396 ACTR1AP61163 376 aa13.27□□□□□ -0.29
CAPN1-215ENST00000528396 GTF2H3Q13889 308 aa13.27□□□□□ -0.29
CAPN1-215ENST00000528396 TAF1AQ15573 450 aaPredicted RBP13.27□□□□□ -0.29
CAPN1-215ENST00000528396 SMAD1Q15797 465 aaKnown RBP13.27□□□□□ -0.29
CAPN1-215ENST00000528396 CCNG2Q16589 344 aa13.27□□□□□ -0.29
CAPN1-215ENST00000528396 GUSBP11Q6P575 273 aa13.27□□□□□ -0.29
CAPN1-215ENST00000528396 FAM151BQ6UXP7 276 aa13.27□□□□□ -0.29
CAPN1-215ENST00000528396 RANBP10Q6VN20 620 aa13.27□□□□□ -0.29
CAPN1-215ENST00000528396 PPP1R21Q6ZMI0 780 aa13.27□□□□□ -0.29
CAPN1-215ENST00000528396 TMPRSS7Q7RTY8 843 aa13.27□□□□□ -0.29
CAPN1-215ENST00000528396 LINC00523Q86TU6 105 aa13.27□□□□□ -0.29
CAPN1-215ENST00000528396 TTC30BQ8N4P2 665 aa13.27□□□□□ -0.29
CAPN1-215ENST00000528396 OR6C4Q8NGE1 309 aa13.27□□□□□ -0.29
CAPN1-215ENST00000528396 GLYATL1Q969I3 302 aa13.27□□□□□ -0.29
CAPN1-215ENST00000528396 EID2BQ96D98 161 aa13.27□□□□□ -0.29
CAPN1-215ENST00000528396 COX14Q96I36 57 aa13.27□□□□□ -0.29
CAPN1-215ENST00000528396 PBKQ96KB5 322 aa13.27□□□□□ -0.29
CAPN1-215ENST00000528396 WDR24Q96S15 920 aa13.27□□□□□ -0.29
CAPN1-215ENST00000528396 NAP1L3Q99457 506 aaPredicted RBP13.27□□□□□ -0.29
CAPN1-215ENST00000528396 GORASP1Q9BQQ3 440 aa13.27□□□□□ -0.29
CAPN1-215ENST00000528396 ZCCHC2Q9C0B9 1178 aaKnown RBP13.27□□□□□ -0.29
CAPN1-215ENST00000528396 OR2AG1Q9H205 316 aa13.27□□□□□ -0.29
CAPN1-215ENST00000528396 KCNF1Q9H3M0 494 aa13.27□□□□□ -0.29
CAPN1-215ENST00000528396 RMI1Q9H9A7 625 aa13.27□□□□□ -0.29
CAPN1-215ENST00000528396 WASF3Q9UPY6 502 aa13.27□□□□□ -0.29
CAPN1-215ENST00000528396 ERI2A8K979 691 aaKnown RBP13.26□□□□□ -0.29
CAPN1-215ENST00000528396 OPA1O60313 960 aa13.26□□□□□ -0.29
CAPN1-215ENST00000528396 METTL18O95568 372 aa13.26□□□□□ -0.29
CAPN1-215ENST00000528396 ADRA1AP35348 466 aa13.26□□□□□ -0.29
CAPN1-215ENST00000528396 FDFT1P37268 417 aa13.26□□□□□ -0.29
CAPN1-215ENST00000528396 CTBSQ01459 385 aa13.26□□□□□ -0.29
CAPN1-215ENST00000528396 AKAP13Q12802 2813 aa13.26□□□□□ -0.29
CAPN1-215ENST00000528396 OLIG2Q13516 323 aa13.26□□□□□ -0.29
CAPN1-215ENST00000528396 ITGA9Q13797 1035 aa13.26□□□□□ -0.29
CAPN1-215ENST00000528396 SEPT6Q14141 434 aa13.26□□□□□ -0.29
CAPN1-215ENST00000528396 OASLQ15646 514 aaKnown RBP13.26□□□□□ -0.29
CAPN1-215ENST00000528396 UNQ6494/PRO21346Q6UXR6 183 aa13.26□□□□□ -0.29
CAPN1-215ENST00000528396 CCNI2Q6ZMN8 369 aaPredicted RBP13.26□□□□□ -0.29
CAPN1-215ENST00000528396 CHST15Q7LFX5 561 aaPredicted RBP13.26□□□□□ -0.29
CAPN1-215ENST00000528396 PDCD7Q8N8D1 485 aaKnown RBP13.26□□□□□ -0.29
CAPN1-215ENST00000528396 DNAAF3Q8N9W5 541 aa13.26□□□□□ -0.29
CAPN1-215ENST00000528396 CCL4L1Q8NHW4 92 aa13.26□□□□□ -0.29
CAPN1-215ENST00000528396 BRSK1Q8TDC3 778 aa13.26□□□□□ -0.29
CAPN1-215ENST00000528396 GPBAR1Q8TDU6 330 aa13.26□□□□□ -0.29
CAPN1-215ENST00000528396 ZDHHC1Q8WTX9 485 aa13.26□□□□□ -0.29
CAPN1-215ENST00000528396 RTP4Q96DX8 246 aa13.26□□□□□ -0.29
CAPN1-215ENST00000528396 PDLIM2Q96JY6 352 aa13.26□□□□□ -0.29
CAPN1-215ENST00000528396 CNTNAP3BQ96NU0 1288 aa13.26□□□□□ -0.29
CAPN1-215ENST00000528396 CNTNAP3Q9BZ76 1288 aa13.26□□□□□ -0.29
CAPN1-215ENST00000528396 TRIM39Q9HCM9 518 aa13.26□□□□□ -0.29
CAPN1-215ENST00000528396 ARFGAP3Q9NP61 516 aa13.26□□□□□ -0.29
CAPN1-215ENST00000528396 IL26Q9NPH9 171 aa13.26□□□□□ -0.29
CAPN1-215ENST00000528396 IL17CQ9P0M4 197 aa13.26□□□□□ -0.29
CAPN1-215ENST00000528396 TAAR2Q9P1P5 351 aa13.26□□□□□ -0.29
CAPN1-215ENST00000528396 PAK5Q9P286 719 aa13.26□□□□□ -0.29
CAPN1-215ENST00000528396 CNOT6Q9ULM6 557 aaKnown RBP13.26□□□□□ -0.29
CAPN1-215ENST00000528396 CLCA2Q9UQC9 943 aa13.26□□□□□ -0.29
CAPN1-215ENST00000528396 PRKAB1Q9Y478 270 aa13.26□□□□□ -0.29
CAPN1-215ENST00000528396 ARL5AQ9Y689 179 aa13.26□□□□□ -0.29
CAPN1-215ENST00000528396 OAS3Q9Y6K5 1087 aaKnown RBP13.26□□□□□ -0.29
CAPN1-215ENST00000528396 KNTC1P50748 2209 aa13.25□□□□□ -0.29
CAPN1-215ENST00000528396 LY6G6EA0A0G2JKS1 128 aa13.25□□□□□ -0.29
CAPN1-215ENST00000528396 EME2A4GXA9 379 aaPredicted RBP13.25□□□□□ -0.29
CAPN1-215ENST00000528396 GPR89AB7ZAQ6 455 aa13.25□□□□□ -0.29
CAPN1-215ENST00000528396 ZW10O43264 779 aa13.25□□□□□ -0.29
CAPN1-215ENST00000528396 GRID2O43424 1007 aa13.25□□□□□ -0.29
CAPN1-215ENST00000528396 VEGFDO43915 354 aa13.25□□□□□ -0.29
CAPN1-215ENST00000528396 AP2A1O95782 977 aa13.25□□□□□ -0.29
CAPN1-215ENST00000528396 FUCA1P04066 466 aa13.25□□□□□ -0.29
CAPN1-215ENST00000528396 GPR89BP0CG08 455 aa13.25□□□□□ -0.29
CAPN1-215ENST00000528396 AK4P27144 223 aaPredicted RBP13.25□□□□□ -0.29
CAPN1-215ENST00000528396 PPM1FP49593 454 aaPredicted RBP13.25□□□□□ -0.29
CAPN1-215ENST00000528396 INSM1Q01101 510 aaPredicted RBP13.25□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 70.5 ms