RNA–Protein interactions for RNA: ENST00000527920.5

SSSCA1-205, Transcript of Sjogren syndrome/scleroderma autoantigen 1, humanhuman

TSL 3 BASIC

Gene SSSCA1, Length 806 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSSCA1-205ENST00000527920 MPOP05164 745 aa32.78■■■□□ 2.84
SSSCA1-205ENST00000527920 RPLP0P05388 317 aaKnown RBP32.78■■■□□ 2.84
SSSCA1-205ENST00000527920 TNNT3P45378 269 aaPredicted RBP32.78■■■□□ 2.84
SSSCA1-205ENST00000527920 ATP5OP48047 213 aa32.78■■■□□ 2.84
SSSCA1-205ENST00000527920 OTUD4Q01804 1114 aaKnown RBP32.78■■■□□ 2.84
SSSCA1-205ENST00000527920 MPP3Q13368 585 aa32.78■■■□□ 2.84
SSSCA1-205ENST00000527920 SLC30A9Q6PML9 568 aa32.78■■■□□ 2.84
SSSCA1-205ENST00000527920 SPRED1Q7Z699 444 aa32.78■■■□□ 2.84
SSSCA1-205ENST00000527920 SFTPA2Q8IWL1 248 aa32.78■■■□□ 2.84
SSSCA1-205ENST00000527920 GPR26Q8NDV2 337 aa32.78■■■□□ 2.84
SSSCA1-205ENST00000527920 ATXN7L3BQ96GX2 97 aa32.78■■■□□ 2.84
SSSCA1-205ENST00000527920 OXNAD1Q96HP4 312 aaPredicted RBP32.78■■■□□ 2.84
SSSCA1-205ENST00000527920 ZNF578Q96N58 590 aaPredicted RBP32.78■■■□□ 2.84
SSSCA1-205ENST00000527920 LRRN3Q9H3W5 708 aa32.78■■■□□ 2.84
SSSCA1-205ENST00000527920 AMFRQ9UKV5 643 aa32.78■■■□□ 2.84
SSSCA1-205ENST00000527920 PCDHGA8Q9Y5G5 932 aa32.78■■■□□ 2.84
SSSCA1-205ENST00000527920 ARHGEF17Q96PE2 2063 aaPredicted RBP32.78■■■□□ 2.84
SSSCA1-205ENST00000527920 ZFYVE26Q68DK2 2539 aa32.77■■■□□ 2.84
SSSCA1-205ENST00000527920 A0A1W2PQM1 296 aa32.77■■■□□ 2.84
SSSCA1-205ENST00000527920 TMX2-CTNND1H3BSU7 103 aa32.77■■■□□ 2.84
SSSCA1-205ENST00000527920 DNAJC6O75061 913 aa32.77■■■□□ 2.84
SSSCA1-205ENST00000527920 TJP3O95049 919 aa32.77■■■□□ 2.84
SSSCA1-205ENST00000527920 ACTR1BP42025 376 aa32.77■■■□□ 2.84
SSSCA1-205ENST00000527920 ACTR1AP61163 376 aa32.77■■■□□ 2.84
SSSCA1-205ENST00000527920 CCL7P80098 99 aa32.77■■■□□ 2.84
SSSCA1-205ENST00000527920 NR1D2Q14995 579 aa32.77■■■□□ 2.84
SSSCA1-205ENST00000527920 ZNF569Q5MCW4 686 aa32.77■■■□□ 2.84
SSSCA1-205ENST00000527920 PEX26Q7Z412 305 aa32.77■■■□□ 2.84
SSSCA1-205ENST00000527920 CDKL3Q8IVW4 592 aaPredicted RBP32.77■■■□□ 2.84
SSSCA1-205ENST00000527920 TRAM1L1Q8N609 369 aa32.77■■■□□ 2.84
SSSCA1-205ENST00000527920 MRGPRX2Q96LB1 330 aa32.77■■■□□ 2.84
SSSCA1-205ENST00000527920 DESI2Q9BSY9 194 aa32.77■■■□□ 2.84
SSSCA1-205ENST00000527920 GBA3Q9H227 469 aa32.77■■■□□ 2.84
SSSCA1-205ENST00000527920 MACROD2A1Z1Q3 448 aa32.76■■■□□ 2.83
SSSCA1-205ENST00000527920 CASC3O15234 703 aaKnown RBP32.76■■■□□ 2.83
SSSCA1-205ENST00000527920 ASMTLO95671 621 aa32.76■■■□□ 2.83
SSSCA1-205ENST00000527920 PYGMP11217 842 aa32.76■■■□□ 2.83
SSSCA1-205ENST00000527920 HLA-DPA1P20036 260 aa32.76■■■□□ 2.83
SSSCA1-205ENST00000527920 RBL1P28749 1068 aa32.76■■■□□ 2.83
SSSCA1-205ENST00000527920 EIF2S3P41091 472 aaKnown RBP32.76■■■□□ 2.83
SSSCA1-205ENST00000527920 MLLT3P42568 568 aaPredicted RBP32.76■■■□□ 2.83
SSSCA1-205ENST00000527920 ERVPABLB-1P60509 514 aa32.76■■■□□ 2.83
SSSCA1-205ENST00000527920 MARK2Q7KZI7 788 aaKnown RBP32.76■■■□□ 2.83
SSSCA1-205ENST00000527920 UBL4BQ8N7F7 174 aa32.76■■■□□ 2.83
SSSCA1-205ENST00000527920 LIN37Q96GY3 246 aaPredicted RBP32.76■■■□□ 2.83
SSSCA1-205ENST00000527920 PLEKHG4BQ96PX9 1271 aa32.76■■■□□ 2.83
SSSCA1-205ENST00000527920 SPATA16Q9BXB7 569 aa32.76■■■□□ 2.83
SSSCA1-205ENST00000527920 SYNDIG1Q9H7V2 258 aa32.76■■■□□ 2.83
SSSCA1-205ENST00000527920 HACD3Q9P035 362 aa32.76■■■□□ 2.83
SSSCA1-205ENST00000527920 RSPH14Q9UHP6 348 aa32.76■■■□□ 2.83
SSSCA1-205ENST00000527920 SPO11Q9Y5K1 396 aa32.76■■■□□ 2.83
SSSCA1-205ENST00000527920 GPR89AB7ZAQ6 455 aa32.75■■■□□ 2.83
SSSCA1-205ENST00000527920 ATP1A1P05023 1023 aaKnown RBP32.75■■■□□ 2.83
SSSCA1-205ENST00000527920 GPR89BP0CG08 455 aa32.75■■■□□ 2.83
SSSCA1-205ENST00000527920 HMGCLP35914 325 aa32.75■■■□□ 2.83
SSSCA1-205ENST00000527920 GSDMDP57764 484 aa32.75■■■□□ 2.83
SSSCA1-205ENST00000527920 ITPRIPL1Q6GPH6 555 aa32.75■■■□□ 2.83
SSSCA1-205ENST00000527920 NAGSQ8N159 534 aa32.75■■■□□ 2.83
SSSCA1-205ENST00000527920 CARD9Q9H257 536 aa32.75■■■□□ 2.83
SSSCA1-205ENST00000527920 TRIM10Q9UDY6 481 aa32.75■■■□□ 2.83
SSSCA1-205ENST00000527920 SATB2Q9UPW6 733 aa32.75■■■□□ 2.83
SSSCA1-205ENST00000527920 A0A1W2PNU3 283 aaPredicted RBP32.74■■■□□ 2.83
SSSCA1-205ENST00000527920 ECEL1O95672 775 aa32.74■■■□□ 2.83
SSSCA1-205ENST00000527920 BPIP17213 487 aa32.74■■■□□ 2.83
SSSCA1-205ENST00000527920 CCKBRP32239 447 aa32.74■■■□□ 2.83
SSSCA1-205ENST00000527920 MAZP56270 477 aaKnown RBP32.74■■■□□ 2.83
SSSCA1-205ENST00000527920 EIF3EP60228 445 aaKnown RBP32.74■■■□□ 2.83
SSSCA1-205ENST00000527920 EIF3IQ13347 325 aaKnown RBP32.74■■■□□ 2.83
SSSCA1-205ENST00000527920 SLC1A5Q15758 541 aa32.74■■■□□ 2.83
SSSCA1-205ENST00000527920 CLPPQ16740 277 aaPredicted RBP32.74■■■□□ 2.83
SSSCA1-205ENST00000527920 SIRPB2Q5JXA9 342 aa32.74■■■□□ 2.83
SSSCA1-205ENST00000527920 ARL14Q8N4G2 192 aa32.74■■■□□ 2.83
SSSCA1-205ENST00000527920 WDR36Q8NI36 951 aaKnown RBP32.74■■■□□ 2.83
SSSCA1-205ENST00000527920 DTX3LQ8TDB6 740 aa32.74■■■□□ 2.83
SSSCA1-205ENST00000527920 TMEM74Q96NL1 305 aa32.74■■■□□ 2.83
SSSCA1-205ENST00000527920 ASCL3Q9NQ33 180 aa32.74■■■□□ 2.83
SSSCA1-205ENST00000527920 LHX6Q9UPM6 363 aa32.74■■■□□ 2.83
SSSCA1-205ENST00000527920 CCDC187A0A096LP49 1063 aa32.73■■■□□ 2.83
SSSCA1-205ENST00000527920 ZW10O43264 779 aa32.73■■■□□ 2.83
SSSCA1-205ENST00000527920 NUAK1O60285 661 aa32.73■■■□□ 2.83
SSSCA1-205ENST00000527920 ANXA9O76027 345 aa32.73■■■□□ 2.83
SSSCA1-205ENST00000527920 RBP3P10745 1247 aa32.73■■■□□ 2.83
SSSCA1-205ENST00000527920 GPR3P46089 330 aa32.73■■■□□ 2.83
SSSCA1-205ENST00000527920 ZDHHC20Q5W0Z9 365 aa32.73■■■□□ 2.83
SSSCA1-205ENST00000527920 ALS2CLQ60I27 953 aa32.73■■■□□ 2.83
SSSCA1-205ENST00000527920 RNF10Q8N5U6 811 aaKnown RBP32.73■■■□□ 2.83
SSSCA1-205ENST00000527920 Q8N9G6 341 aaPredicted RBP32.73■■■□□ 2.83
SSSCA1-205ENST00000527920 UBE2Q2Q8WVN8 375 aa32.73■■■□□ 2.83
SSSCA1-205ENST00000527920 GLYATL1Q969I3 302 aa32.73■■■□□ 2.83
SSSCA1-205ENST00000527920 ZNHIT2Q9UHR6 403 aa32.73■■■□□ 2.83
SSSCA1-205ENST00000527920 PLEKHM1Q9Y4G2 1056 aa32.73■■■□□ 2.83
SSSCA1-205ENST00000527920 RRP8O43159 456 aaKnown RBP32.72■■■□□ 2.83
SSSCA1-205ENST00000527920 STK10O94804 968 aaKnown RBP32.72■■■□□ 2.83
SSSCA1-205ENST00000527920 SLC4A1P02730 911 aa32.72■■■□□ 2.83
SSSCA1-205ENST00000527920 GEMP55040 296 aa32.72■■■□□ 2.83
SSSCA1-205ENST00000527920 B4GALNT1Q00973 533 aa32.72■■■□□ 2.83
SSSCA1-205ENST00000527920 C3orf38Q5JPI3 329 aa32.72■■■□□ 2.83
SSSCA1-205ENST00000527920 PHYKPLQ8IUZ5 450 aa32.72■■■□□ 2.83
SSSCA1-205ENST00000527920 TTC30BQ8N4P2 665 aa32.72■■■□□ 2.83
SSSCA1-205ENST00000527920 IPMKQ8NFU5 416 aa32.72■■■□□ 2.83
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms