RNA–Protein interactions for RNA: ENST00000527498.1

PUM1-219, Transcript of pumilio RNA binding family member 1, human

TSL 3

Gene PUM1, Length 652 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PUM1-219	ENST00000527498	GRSF1	Q12849	480 aa	Known RBP eCLIP	3.88	□□□□□ -1.79
PUM1-219	ENST00000527498	EPS8	Q12929	822 aa		3.88	□□□□□ -1.79
PUM1-219	ENST00000527498	BNIP1	Q12981	228 aa		3.88	□□□□□ -1.79
PUM1-219	ENST00000527498	DUSP8	Q13202	625 aa		3.88	□□□□□ -1.79
PUM1-219	ENST00000527498	MSLN	Q13421	630 aa	Predicted RBP	3.88	□□□□□ -1.79
PUM1-219	ENST00000527498	FZD5	Q13467	585 aa		3.88	□□□□□ -1.79
PUM1-219	ENST00000527498	DRP2	Q13474	957 aa		3.88	□□□□□ -1.79
PUM1-219	ENST00000527498	KCNAB1	Q14722	419 aa		3.88	□□□□□ -1.79
PUM1-219	ENST00000527498	GRM4	Q14833	912 aa		3.88	□□□□□ -1.79
PUM1-219	ENST00000527498	NFIL3	Q16649	462 aa		3.88	□□□□□ -1.79
PUM1-219	ENST00000527498	WHAMMP3	Q1A5X7	153 aa		3.88	□□□□□ -1.79
PUM1-219	ENST00000527498	CCDC40	Q4G0X9	1142 aa		3.88	□□□□□ -1.79
PUM1-219	ENST00000527498	CEP78	Q5JTW2	689 aa		3.88	□□□□□ -1.79
PUM1-219	ENST00000527498	AGBL4	Q5VU57	503 aa		3.88	□□□□□ -1.79
PUM1-219	ENST00000527498	SNX30	Q5VWJ9	437 aa		3.88	□□□□□ -1.79
PUM1-219	ENST00000527498	LIPM	Q5VYY2	423 aa		3.88	□□□□□ -1.79
PUM1-219	ENST00000527498	GPR139	Q6DWJ6	353 aa		3.88	□□□□□ -1.79
PUM1-219	ENST00000527498	ABLIM2	Q6H8Q1	611 aa		3.88	□□□□□ -1.79
PUM1-219	ENST00000527498	PARM1	Q6UWI2	310 aa		3.88	□□□□□ -1.79
PUM1-219	ENST00000527498	TPRG1	Q6ZUI0	275 aa		3.88	□□□□□ -1.79
PUM1-219	ENST00000527498	USP30	Q70CQ3	517 aa		3.88	□□□□□ -1.79
PUM1-219	ENST00000527498	SYT13	Q7L8C5	426 aa		3.88	□□□□□ -1.79
PUM1-219	ENST00000527498	YTHDF3	Q7Z739	585 aa	Known RBP	3.88	□□□□□ -1.79
PUM1-219	ENST00000527498	TRABD2A	Q86V40	505 aa		3.88	□□□□□ -1.79
PUM1-219	ENST00000527498	LUZP1	Q86V48	1076 aa		3.88	□□□□□ -1.79
PUM1-219	ENST00000527498	FAM228A	Q86W67	206 aa		3.88	□□□□□ -1.79
PUM1-219	ENST00000527498	VSIG1	Q86XK7	387 aa		3.88	□□□□□ -1.79
PUM1-219	ENST00000527498	ECHDC2	Q86YB7	292 aa		3.88	□□□□□ -1.79
PUM1-219	ENST00000527498	TMEM151B	Q8IW70	566 aa		3.88	□□□□□ -1.79
PUM1-219	ENST00000527498	TAGAP	Q8N103	731 aa		3.88	□□□□□ -1.79
PUM1-219	ENST00000527498	ARHGAP18	Q8N392	663 aa		3.88	□□□□□ -1.79
PUM1-219	ENST00000527498	TMCO5A	Q8N6Q1	288 aa		3.88	□□□□□ -1.79
PUM1-219	ENST00000527498	ZNF713	Q8N859	430 aa	Predicted RBP	3.88	□□□□□ -1.79
PUM1-219	ENST00000527498	LINC00482	Q8N8I6	264 aa		3.88	□□□□□ -1.79
PUM1-219	ENST00000527498	RNF169	Q8NCN4	708 aa		3.88	□□□□□ -1.79
PUM1-219	ENST00000527498	TOR1AIP2	Q8NFQ8	470 aa		3.88	□□□□□ -1.79
PUM1-219	ENST00000527498	MBD3L2	Q8NHZ7	208 aa	Predicted RBP	3.88	□□□□□ -1.79
PUM1-219	ENST00000527498	EXOC6	Q8TAG9	804 aa		3.88	□□□□□ -1.79
PUM1-219	ENST00000527498	TRAF3IP1	Q8TDR0	691 aa	Predicted RBP	3.88	□□□□□ -1.79
PUM1-219	ENST00000527498	SMG7	Q92540	1137 aa	Known RBP	3.88	□□□□□ -1.79
PUM1-219	ENST00000527498	ZNF707	Q96C28	371 aa	Predicted RBP	3.88	□□□□□ -1.79
PUM1-219	ENST00000527498	IGSF21	Q96ID5	467 aa		3.88	□□□□□ -1.79
PUM1-219	ENST00000527498	CNDP2	Q96KP4	475 aa	Known RBP	3.88	□□□□□ -1.79
PUM1-219	ENST00000527498	INPP4A	Q96PE3	977 aa	Predicted RBP	3.88	□□□□□ -1.79
PUM1-219	ENST00000527498	SMO	Q99835	787 aa		3.88	□□□□□ -1.79
PUM1-219	ENST00000527498	SCNM1	Q9BWG6	230 aa		3.88	□□□□□ -1.79
PUM1-219	ENST00000527498	VN1R3	Q9BXE9	311 aa		3.88	□□□□□ -1.79
PUM1-219	ENST00000527498	IMPG2	Q9BZV3	1241 aa		3.88	□□□□□ -1.79
PUM1-219	ENST00000527498	STMN4	Q9H169	189 aa	Predicted RBP	3.88	□□□□□ -1.79
PUM1-219	ENST00000527498	ARRDC1-AS1	Q9H2J1	176 aa		3.88	□□□□□ -1.79
PUM1-219	ENST00000527498	C8orf33	Q9H7E9	229 aa	Predicted RBP	3.88	□□□□□ -1.79
PUM1-219	ENST00000527498	L2HGDH	Q9H9P8	463 aa		3.88	□□□□□ -1.79
PUM1-219	ENST00000527498	VCX3A	Q9NNX9	186 aa		3.88	□□□□□ -1.79
PUM1-219	ENST00000527498	FBXO34	Q9NWN3	711 aa		3.88	□□□□□ -1.79
PUM1-219	ENST00000527498	EMC3	Q9P0I2	261 aa		3.88	□□□□□ -1.79
PUM1-219	ENST00000527498	MBD2	Q9UBB5	411 aa		3.88	□□□□□ -1.79
PUM1-219	ENST00000527498	KCND3	Q9UK17	655 aa		3.88	□□□□□ -1.79
PUM1-219	ENST00000527498	GRID1	Q9ULK0	1009 aa		3.88	□□□□□ -1.79
PUM1-219	ENST00000527498	SLC45A2	Q9UMX9	530 aa		3.88	□□□□□ -1.79
PUM1-219	ENST00000527498	USP22	Q9UPT9	525 aa		3.88	□□□□□ -1.79
PUM1-219	ENST00000527498	CLCA2	Q9UQC9	943 aa		3.88	□□□□□ -1.79
PUM1-219	ENST00000527498	GDA	Q9Y2T3	454 aa		3.88	□□□□□ -1.79
PUM1-219	ENST00000527498	ZSCAN21	Q9Y5A6	473 aa	Predicted RBP	3.88	□□□□□ -1.79
PUM1-219	ENST00000527498	EPN1	Q9Y6I3	576 aa	Predicted RBP	3.88	□□□□□ -1.79
PUM1-219	ENST00000527498	ASCC3	Q8N3C0	2202 aa	Known RBP	3.88	□□□□□ -1.79
PUM1-219	ENST00000527498	PCNX2	A6NKB5	2137 aa		3.88	□□□□□ -1.79
PUM1-219	ENST00000527498	KIF26A	Q9ULI4	1882 aa	Predicted RBP	3.88	□□□□□ -1.79
PUM1-219	ENST00000527498	TENM4	Q6N022	2769 aa		3.87	□□□□□ -1.79
PUM1-219	ENST00000527498	MSANTD3-TMEFF1	A0A0A6YYJ0	341 aa		3.87	□□□□□ -1.79
PUM1-219	ENST00000527498	hCG_1807616	A0A1W2PRN6	198 aa		3.87	□□□□□ -1.79
PUM1-219	ENST00000527498	CDHR4	A6H8M9	788 aa		3.87	□□□□□ -1.79
PUM1-219	ENST00000527498	SPECC1L-ADORA2A	F8WAN1	911 aa		3.87	□□□□□ -1.79
PUM1-219	ENST00000527498	GCOM1	H8Y6P7	765 aa	Predicted RBP	3.87	□□□□□ -1.79
PUM1-219	ENST00000527498	HNRNPR	O43390	633 aa	Known RBP	3.87	□□□□□ -1.79
PUM1-219	ENST00000527498	EXTL3	O43909	919 aa		3.87	□□□□□ -1.79
PUM1-219	ENST00000527498	PFDN1	O60925	122 aa		3.87	□□□□□ -1.79
PUM1-219	ENST00000527498	ADAM23	O75077	832 aa		3.87	□□□□□ -1.79
PUM1-219	ENST00000527498	ATP9A	O75110	1047 aa		3.87	□□□□□ -1.79
PUM1-219	ENST00000527498	ZNF806	P0C7X5	589 aa		3.87	□□□□□ -1.79
PUM1-219	ENST00000527498	SPATA31D3	P0C874	917 aa		3.87	□□□□□ -1.79
PUM1-219	ENST00000527498	POLR2M	P0CAP2	368 aa		3.87	□□□□□ -1.79
PUM1-219	ENST00000527498	CSH1	P0DML2	217 aa		3.87	□□□□□ -1.79
PUM1-219	ENST00000527498	CSH2	P0DML3	217 aa		3.87	□□□□□ -1.79
PUM1-219	ENST00000527498	ITGB5	P18084	799 aa		3.87	□□□□□ -1.79
PUM1-219	ENST00000527498	IL10	P22301	178 aa		3.87	□□□□□ -1.79
PUM1-219	ENST00000527498	VIPR1	P32241	457 aa		3.87	□□□□□ -1.79
PUM1-219	ENST00000527498	PXN	P49023	591 aa	Predicted RBP	3.87	□□□□□ -1.79
PUM1-219	ENST00000527498	LMAN1	P49257	510 aa		3.87	□□□□□ -1.79
PUM1-219	ENST00000527498	ACADVL	P49748	655 aa		3.87	□□□□□ -1.79
PUM1-219	ENST00000527498	ADCY7	P51828	1080 aa		3.87	□□□□□ -1.79
PUM1-219	ENST00000527498	PRKAG1	P54619	331 aa		3.87	□□□□□ -1.79
PUM1-219	ENST00000527498	LOXL3	P58215	753 aa		3.87	□□□□□ -1.79
PUM1-219	ENST00000527498	RAP2B	P61225	183 aa		3.87	□□□□□ -1.79
PUM1-219	ENST00000527498	ATP2C1	P98194	919 aa	Predicted RBP	3.87	□□□□□ -1.79
PUM1-219	ENST00000527498	MC1R	Q01726	317 aa		3.87	□□□□□ -1.79
PUM1-219	ENST00000527498	CREB5	Q02930	508 aa		3.87	□□□□□ -1.79
PUM1-219	ENST00000527498	KCNMA1	Q12791	1236 aa		3.87	□□□□□ -1.79
PUM1-219	ENST00000527498	SF3A3	Q12874	501 aa	Known RBP eCLIP	3.87	□□□□□ -1.79
PUM1-219	ENST00000527498	SNCB	Q16143	134 aa		3.87	□□□□□ -1.79
PUM1-219	ENST00000527498	BCL2A1	Q16548	175 aa		3.87	□□□□□ -1.79

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