RNA–Protein interactions for RNA: ENST00000527189.5

CAPN1-207, Transcript of calpain 1, humanhuman

TSL 4

Gene CAPN1, Length 558 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-207ENST00000527189 LCA5LO95447 670 aa13.3□□□□□ -0.28
CAPN1-207ENST00000527189 KRT1P04264 644 aa13.3□□□□□ -0.28
CAPN1-207ENST00000527189 COMTP21964 271 aa13.3□□□□□ -0.28
CAPN1-207ENST00000527189 ALDH4A1P30038 563 aa13.3□□□□□ -0.28
CAPN1-207ENST00000527189 MAGEA1P43355 309 aa13.3□□□□□ -0.28
CAPN1-207ENST00000527189 MAZP56270 477 aaKnown RBP13.3□□□□□ -0.28
CAPN1-207ENST00000527189 VAC14Q08AM6 782 aa13.3□□□□□ -0.28
CAPN1-207ENST00000527189 C19orf57Q0VDD7 668 aa13.3□□□□□ -0.28
CAPN1-207ENST00000527189 TRA2AQ13595 282 aaKnown RBP eCLIP13.3□□□□□ -0.28
CAPN1-207ENST00000527189 PDPK2PQ6A1A2 396 aa13.3□□□□□ -0.28
CAPN1-207ENST00000527189 CCDC70Q6NSX1 233 aa13.3□□□□□ -0.28
CAPN1-207ENST00000527189 DOK6Q6PKX4 331 aa13.3□□□□□ -0.28
CAPN1-207ENST00000527189 RFX6Q8HWS3 928 aa13.3□□□□□ -0.28
CAPN1-207ENST00000527189 SLITRK4Q8IW52 837 aa13.3□□□□□ -0.28
CAPN1-207ENST00000527189 PTCD2Q8WV60 388 aaKnown RBP13.3□□□□□ -0.28
CAPN1-207ENST00000527189 RNF25Q96BH1 459 aaPredicted RBP13.3□□□□□ -0.28
CAPN1-207ENST00000527189 TRIB3Q96RU7 358 aa13.3□□□□□ -0.28
CAPN1-207ENST00000527189 SUDS3Q9H7L9 328 aaPredicted RBP13.3□□□□□ -0.28
CAPN1-207ENST00000527189 LUC7LQ9NQ29 371 aaKnown RBP13.3□□□□□ -0.28
CAPN1-207ENST00000527189 EIF2AK3Q9NZJ5 1116 aaKnown RBP13.3□□□□□ -0.28
CAPN1-207ENST00000527189 ATXN7L1Q9ULK2 861 aaPredicted RBP13.3□□□□□ -0.28
CAPN1-207ENST00000527189 CNOT6Q9ULM6 557 aaKnown RBP13.3□□□□□ -0.28
CAPN1-207ENST00000527189 ALG6Q9Y672 507 aa13.3□□□□□ -0.28
CAPN1-207ENST00000527189 KIF26BQ2KJY2 2108 aa13.3□□□□□ -0.28
CAPN1-207ENST00000527189 USP9XQ93008 2570 aaPredicted RBP13.29□□□□□ -0.28
CAPN1-207ENST00000527189 PMS2P1A4D2B8 440 aa13.29□□□□□ -0.28
CAPN1-207ENST00000527189 GPR89AB7ZAQ6 455 aa13.29□□□□□ -0.28
CAPN1-207ENST00000527189 ERVH48-1M5A8F1 160 aa13.29□□□□□ -0.28
CAPN1-207ENST00000527189 HGSO14964 777 aaPredicted RBP13.29□□□□□ -0.28
CAPN1-207ENST00000527189 INPP4BO15327 924 aa13.29□□□□□ -0.28
CAPN1-207ENST00000527189 DNAJC6O75061 913 aa13.29□□□□□ -0.28
CAPN1-207ENST00000527189 ASMTLO95671 621 aa13.29□□□□□ -0.28
CAPN1-207ENST00000527189 GPR89BP0CG08 455 aa13.29□□□□□ -0.28
CAPN1-207ENST00000527189 CD1CP29017 333 aa13.29□□□□□ -0.28
CAPN1-207ENST00000527189 SLC5A2P31639 672 aa13.29□□□□□ -0.28
CAPN1-207ENST00000527189 CDKN2BP42772 138 aa13.29□□□□□ -0.28
CAPN1-207ENST00000527189 NOP2P46087 812 aaKnown RBP13.29□□□□□ -0.28
CAPN1-207ENST00000527189 FASLGP48023 281 aa13.29□□□□□ -0.28
CAPN1-207ENST00000527189 OR1D5P58170 312 aa13.29□□□□□ -0.28
CAPN1-207ENST00000527189 DCDC1P59894 354 aa13.29□□□□□ -0.28
CAPN1-207ENST00000527189 GPLD1P80108 840 aa13.29□□□□□ -0.28
CAPN1-207ENST00000527189 CDK18Q07002 472 aa13.29□□□□□ -0.28
CAPN1-207ENST00000527189 MFSD7Q6UXD7 560 aa13.29□□□□□ -0.28
CAPN1-207ENST00000527189 TMC3Q7Z5M5 1100 aa13.29□□□□□ -0.28
CAPN1-207ENST00000527189 TC2NQ8N9U0 490 aa13.29□□□□□ -0.28
CAPN1-207ENST00000527189 SLC39A7Q92504 469 aa13.29□□□□□ -0.28
CAPN1-207ENST00000527189 CALR3Q96L12 384 aaKnown RBP13.29□□□□□ -0.28
CAPN1-207ENST00000527189 TEKT5Q96M29 485 aa13.29□□□□□ -0.28
CAPN1-207ENST00000527189 AGAP3Q96P47 875 aa13.29□□□□□ -0.28
CAPN1-207ENST00000527189 ZSCAN5AQ9BUG6 496 aa13.29□□□□□ -0.28
CAPN1-207ENST00000527189 TRIM5Q9C035 493 aa13.29□□□□□ -0.28
CAPN1-207ENST00000527189 CARD9Q9H257 536 aa13.29□□□□□ -0.28
CAPN1-207ENST00000527189 NFKBIL1Q9UBC1 381 aaPredicted RBP13.29□□□□□ -0.28
CAPN1-207ENST00000527189 ZNHIT2Q9UHR6 403 aa13.29□□□□□ -0.28
CAPN1-207ENST00000527189 LOXL2Q9Y4K0 774 aa13.29□□□□□ -0.28
CAPN1-207ENST00000527189 TEX15Q9BXT5 2789 aa13.29□□□□□ -0.28
CAPN1-207ENST00000527189 A0A0A6YYK5 440 aaPredicted RBP13.28□□□□□ -0.28
CAPN1-207ENST00000527189 K7ENP7 123 aa13.28□□□□□ -0.28
CAPN1-207ENST00000527189 PPM1DO15297 605 aa13.28□□□□□ -0.28
CAPN1-207ENST00000527189 ZRANB2O95218 330 aaKnown RBP eCLIP13.28□□□□□ -0.28
CAPN1-207ENST00000527189 EPOP01588 193 aa13.28□□□□□ -0.28
CAPN1-207ENST00000527189 SLC2A4P14672 509 aa13.28□□□□□ -0.28
CAPN1-207ENST00000527189 CD82P27701 267 aa13.28□□□□□ -0.28
CAPN1-207ENST00000527189 CLCNKAP51800 687 aa13.28□□□□□ -0.28
CAPN1-207ENST00000527189 CLN3Q13286 438 aa13.28□□□□□ -0.28
CAPN1-207ENST00000527189 PRKD1Q15139 912 aaPredicted RBP13.28□□□□□ -0.28
CAPN1-207ENST00000527189 SPA17Q15506 151 aa13.28□□□□□ -0.28
CAPN1-207ENST00000527189 MAP9Q49MG5 647 aa13.28□□□□□ -0.28
CAPN1-207ENST00000527189 TFDP3Q5H9I0 405 aa13.28□□□□□ -0.28
CAPN1-207ENST00000527189 PHF19Q5T6S3 580 aa13.28□□□□□ -0.28
CAPN1-207ENST00000527189 TMEM164Q5U3C3 297 aa13.28□□□□□ -0.28
CAPN1-207ENST00000527189 INO80CQ6PI98 192 aaPredicted RBP13.28□□□□□ -0.28
CAPN1-207ENST00000527189 NPNTQ6UXI9 565 aa13.28□□□□□ -0.28
CAPN1-207ENST00000527189 MARK2Q7KZI7 788 aaKnown RBP13.28□□□□□ -0.28
CAPN1-207ENST00000527189 TMPRSS9Q7Z410 1059 aa13.28□□□□□ -0.28
CAPN1-207ENST00000527189 TRIM74Q86UV6 250 aa13.28□□□□□ -0.28
CAPN1-207ENST00000527189 RCOR2Q8IZ40 523 aa13.28□□□□□ -0.28
CAPN1-207ENST00000527189 SFRP1Q8N474 314 aa13.28□□□□□ -0.28
CAPN1-207ENST00000527189 OR4D9Q8NGE8 314 aa13.28□□□□□ -0.28
CAPN1-207ENST00000527189 TFB1MQ8WVM0 346 aaKnown RBP13.28□□□□□ -0.28
CAPN1-207ENST00000527189 SH3KBP1Q96B97 665 aa13.28□□□□□ -0.28
CAPN1-207ENST00000527189 EID2BQ96D98 161 aa13.28□□□□□ -0.28
CAPN1-207ENST00000527189 CCNL2Q96S94 520 aaPredicted RBP13.28□□□□□ -0.28
CAPN1-207ENST00000527189 VAT1Q99536 393 aa13.28□□□□□ -0.28
CAPN1-207ENST00000527189 SEMA6CQ9H3T2 930 aa13.28□□□□□ -0.28
CAPN1-207ENST00000527189 GLOD4Q9HC38 313 aa13.28□□□□□ -0.28
CAPN1-207ENST00000527189 CPNE5Q9HCH3 593 aa13.28□□□□□ -0.28
CAPN1-207ENST00000527189 TRIM39Q9HCM9 518 aa13.28□□□□□ -0.28
CAPN1-207ENST00000527189 PISDQ9UG56 409 aa13.28□□□□□ -0.28
CAPN1-207ENST00000527189 SBDSQ9Y3A5 250 aaKnown RBP eCLIP13.28□□□□□ -0.28
CAPN1-207ENST00000527189 PLEKHM1Q9Y4G2 1056 aa13.28□□□□□ -0.28
CAPN1-207ENST00000527189 IGHV1OR21-1A0A087WYE8 117 aa13.27□□□□□ -0.29
CAPN1-207ENST00000527189 OR5K4A6NMS3 321 aa13.27□□□□□ -0.29
CAPN1-207ENST00000527189 FADS2P1A8MWK0 482 aa13.27□□□□□ -0.29
CAPN1-207ENST00000527189 NUAK1O60285 661 aa13.27□□□□□ -0.29
CAPN1-207ENST00000527189 CST8O60676 142 aa13.27□□□□□ -0.29
CAPN1-207ENST00000527189 NDST3O95803 873 aa13.27□□□□□ -0.29
CAPN1-207ENST00000527189 ATP1A1P05023 1023 aaKnown RBP13.27□□□□□ -0.29
CAPN1-207ENST00000527189 TNNT1P13805 278 aa13.27□□□□□ -0.29
CAPN1-207ENST00000527189 PTPN3P26045 913 aa13.27□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms