RNA–Protein interactions for RNA: ENST00000525121.2

HMGB1P40-201, Transcript of high mobility group box 1 pseudogene 40, humanhuman

BASIC

Gene HMGB1P40, Length 540 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P40-201ENST00000525121 FRMD8Q9BZ67 464 aaPredicted RBP5.36□□□□□ -1.55
HMGB1P40-201ENST00000525121 ABCG4Q9H172 646 aa5.36□□□□□ -1.55
HMGB1P40-201ENST00000525121 DPEP2Q9H4A9 486 aa5.36□□□□□ -1.55
HMGB1P40-201ENST00000525121 STN1Q9H668 368 aaKnown RBP5.36□□□□□ -1.55
HMGB1P40-201ENST00000525121 ETNK1Q9HBU6 452 aa5.36□□□□□ -1.55
HMGB1P40-201ENST00000525121 ARNT2Q9HBZ2 717 aa5.36□□□□□ -1.55
HMGB1P40-201ENST00000525121 TRIM39Q9HCM9 518 aa5.36□□□□□ -1.55
HMGB1P40-201ENST00000525121 KCND1Q9NSA2 647 aa5.36□□□□□ -1.55
HMGB1P40-201ENST00000525121 UCKL1Q9NWZ5 548 aa5.36□□□□□ -1.55
HMGB1P40-201ENST00000525121 TRNAU1APQ9NX07 287 aaKnown RBP5.36□□□□□ -1.55
HMGB1P40-201ENST00000525121 IL17CQ9P0M4 197 aa5.36□□□□□ -1.55
HMGB1P40-201ENST00000525121 GULP1Q9UBP9 304 aa5.36□□□□□ -1.55
HMGB1P40-201ENST00000525121 ASIC3Q9UHC3 531 aa5.36□□□□□ -1.55
HMGB1P40-201ENST00000525121 ZNHIT2Q9UHR6 403 aa5.36□□□□□ -1.55
HMGB1P40-201ENST00000525121 CRLS1Q9UJA2 301 aa5.36□□□□□ -1.55
HMGB1P40-201ENST00000525121 SUFUQ9UMX1 484 aa5.36□□□□□ -1.55
HMGB1P40-201ENST00000525121 GPR34Q9UPC5 381 aa5.36□□□□□ -1.55
HMGB1P40-201ENST00000525121 SLC17A4Q9Y2C5 497 aa5.36□□□□□ -1.55
HMGB1P40-201ENST00000525121 TMEM98Q9Y2Y6 226 aa5.36□□□□□ -1.55
HMGB1P40-201ENST00000525121 GPSM3Q9Y4H4 160 aa5.36□□□□□ -1.55
HMGB1P40-201ENST00000525121 PCDHGA1Q9Y5H4 931 aa5.36□□□□□ -1.55
HMGB1P40-201ENST00000525121 ARL5AQ9Y689 179 aa5.36□□□□□ -1.55
HMGB1P40-201ENST00000525121 PLXNA2O75051 1894 aa5.36□□□□□ -1.55
HMGB1P40-201ENST00000525121 SHROOM3Q8TF72 1996 aa5.36□□□□□ -1.55
HMGB1P40-201ENST00000525121 NUP205Q92621 2012 aa5.36□□□□□ -1.55
HMGB1P40-201ENST00000525121 EP300Q09472 2414 aaPredicted RBP5.36□□□□□ -1.55
HMGB1P40-201ENST00000525121 NUMA1Q14980 2115 aa5.35□□□□□ -1.55
HMGB1P40-201ENST00000525121 CEP192Q8TEP8 1941 aa5.35□□□□□ -1.55
HMGB1P40-201ENST00000525121 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP5.35□□□□□ -1.55
HMGB1P40-201ENST00000525121 CPED1A4D0V7 1026 aa5.35□□□□□ -1.55
HMGB1P40-201ENST00000525121 KLHL33A6NCF5 533 aa5.35□□□□□ -1.55
HMGB1P40-201ENST00000525121 FADS2P1A8MWK0 482 aa5.35□□□□□ -1.55
HMGB1P40-201ENST00000525121 CCDC188H7C350 402 aa5.35□□□□□ -1.55
HMGB1P40-201ENST00000525121 KIF2AO00139 706 aaPredicted RBP5.35□□□□□ -1.55
HMGB1P40-201ENST00000525121 TRIM38O00635 465 aa5.35□□□□□ -1.55
HMGB1P40-201ENST00000525121 GIPC1O14908 333 aa5.35□□□□□ -1.55
HMGB1P40-201ENST00000525121 AURKAO14965 403 aa5.35□□□□□ -1.55
HMGB1P40-201ENST00000525121 KMOO15229 486 aa5.35□□□□□ -1.55
HMGB1P40-201ENST00000525121 ZNF185O15231 689 aa5.35□□□□□ -1.55
HMGB1P40-201ENST00000525121 YY2O15391 372 aa5.35□□□□□ -1.55
HMGB1P40-201ENST00000525121 GRID2O43424 1007 aa5.35□□□□□ -1.55
HMGB1P40-201ENST00000525121 BUD23O43709 281 aaKnown RBP5.35□□□□□ -1.55
HMGB1P40-201ENST00000525121 CBFA2T3O75081 653 aa5.35□□□□□ -1.55
HMGB1P40-201ENST00000525121 SRP72O76094 671 aaKnown RBP5.35□□□□□ -1.55
HMGB1P40-201ENST00000525121 CDK14O94921 469 aa5.35□□□□□ -1.55
HMGB1P40-201ENST00000525121 SOD1P00441 154 aa5.35□□□□□ -1.55
HMGB1P40-201ENST00000525121 CEACAM5P06731 702 aa5.35□□□□□ -1.55
HMGB1P40-201ENST00000525121 ADRB1P08588 477 aa5.35□□□□□ -1.55
HMGB1P40-201ENST00000525121 ZSCAN5DPP0CG00 497 aa5.35□□□□□ -1.55
HMGB1P40-201ENST00000525121 CKMT1AP12532 417 aa5.35□□□□□ -1.55
HMGB1P40-201ENST00000525121 ETS1P14921 441 aa5.35□□□□□ -1.55
HMGB1P40-201ENST00000525121 PAMP19021 973 aa5.35□□□□□ -1.55
HMGB1P40-201ENST00000525121 TPSB2P20231 275 aa5.35□□□□□ -1.55
HMGB1P40-201ENST00000525121 MSH3P20585 1137 aa5.35□□□□□ -1.55
HMGB1P40-201ENST00000525121 PPARGP37231 505 aaPredicted RBP5.35□□□□□ -1.55
HMGB1P40-201ENST00000525121 ADCY8P40145 1251 aa5.35□□□□□ -1.55
HMGB1P40-201ENST00000525121 ACTR1BP42025 376 aa5.35□□□□□ -1.55
HMGB1P40-201ENST00000525121 KCNJ1P48048 391 aa5.35□□□□□ -1.55
HMGB1P40-201ENST00000525121 PPM1FP49593 454 aaPredicted RBP5.35□□□□□ -1.55
HMGB1P40-201ENST00000525121 ACADVLP49748 655 aa5.35□□□□□ -1.55
HMGB1P40-201ENST00000525121 ZNF140P52738 457 aaPredicted RBP5.35□□□□□ -1.55
HMGB1P40-201ENST00000525121 ACTR1AP61163 376 aa5.35□□□□□ -1.55
HMGB1P40-201ENST00000525121 ETF1P62495 437 aaKnown RBP5.35□□□□□ -1.55
HMGB1P40-201ENST00000525121 PRAMEP78395 509 aa5.35□□□□□ -1.55
HMGB1P40-201ENST00000525121 TMPRSS15P98073 1019 aa5.35□□□□□ -1.55
HMGB1P40-201ENST00000525121 E2F1Q01094 437 aa5.35□□□□□ -1.55
HMGB1P40-201ENST00000525121 CKAP4Q07065 602 aaKnown RBP5.35□□□□□ -1.55
HMGB1P40-201ENST00000525121 FOXC1Q12948 553 aa5.35□□□□□ -1.55
HMGB1P40-201ENST00000525121 NFATC2Q13469 925 aa5.35□□□□□ -1.55
HMGB1P40-201ENST00000525121 OLIG2Q13516 323 aa5.35□□□□□ -1.55
HMGB1P40-201ENST00000525121 TCEA2Q15560 299 aa5.35□□□□□ -1.55
HMGB1P40-201ENST00000525121 TRIP13Q15645 432 aaPredicted RBP5.35□□□□□ -1.55
HMGB1P40-201ENST00000525121 TPSAB1Q15661 275 aa5.35□□□□□ -1.55
HMGB1P40-201ENST00000525121 CHRNA6Q15825 494 aa5.35□□□□□ -1.55
HMGB1P40-201ENST00000525121 CYP1B1Q16678 543 aa5.35□□□□□ -1.55
HMGB1P40-201ENST00000525121 INSCQ1MX18 579 aa5.35□□□□□ -1.55
HMGB1P40-201ENST00000525121 GPR33Q49SQ1 333 aa5.35□□□□□ -1.55
HMGB1P40-201ENST00000525121 ATP13A5Q4VNC0 1218 aa5.35□□□□□ -1.55
HMGB1P40-201ENST00000525121 ZRANB3Q5FWF4 1079 aa5.35□□□□□ -1.55
HMGB1P40-201ENST00000525121 AARS2Q5JTZ9 985 aaKnown RBP5.35□□□□□ -1.55
HMGB1P40-201ENST00000525121 N4BP2L1Q5TBK1 243 aaPredicted RBP5.35□□□□□ -1.55
HMGB1P40-201ENST00000525121 LYPLAL1Q5VWZ2 237 aa5.35□□□□□ -1.55
HMGB1P40-201ENST00000525121 PAPD7Q5XG87 772 aaKnown RBP5.35□□□□□ -1.55
HMGB1P40-201ENST00000525121 CASC4Q6P4E1 433 aa5.35□□□□□ -1.55
HMGB1P40-201ENST00000525121 ZNF449Q6P9G9 518 aa5.35□□□□□ -1.55
HMGB1P40-201ENST00000525121 SLC30A9Q6PML9 568 aa5.35□□□□□ -1.55
HMGB1P40-201ENST00000525121 AFTPHQ6ULP2 937 aa5.35□□□□□ -1.55
HMGB1P40-201ENST00000525121 CRTC3Q6UUV7 619 aa5.35□□□□□ -1.55
HMGB1P40-201ENST00000525121 SYT10Q6XYQ8 523 aa5.35□□□□□ -1.55
HMGB1P40-201ENST00000525121 CHST15Q7LFX5 561 aaPredicted RBP5.35□□□□□ -1.55
HMGB1P40-201ENST00000525121 KANSL1Q7Z3B3 1105 aa5.35□□□□□ -1.55
HMGB1P40-201ENST00000525121 PCGF5Q86SE9 256 aa5.35□□□□□ -1.55
HMGB1P40-201ENST00000525121 LRRTM4Q86VH4 590 aa5.35□□□□□ -1.55
HMGB1P40-201ENST00000525121 TRAPPC5Q8IUR0 188 aa5.35□□□□□ -1.55
HMGB1P40-201ENST00000525121 KLHDC8BQ8IXV7 354 aa5.35□□□□□ -1.55
HMGB1P40-201ENST00000525121 PELI3Q8N2H9 469 aa5.35□□□□□ -1.55
HMGB1P40-201ENST00000525121 GALNT15Q8N3T1 639 aa5.35□□□□□ -1.55
HMGB1P40-201ENST00000525121 SLC25A45Q8N413 288 aa5.35□□□□□ -1.55
HMGB1P40-201ENST00000525121 OTUD6BQ8N6M0 293 aa5.35□□□□□ -1.55
HMGB1P40-201ENST00000525121 FAM181AQ8N9Y4 354 aa5.35□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms