RNA–Protein interactions for RNA: ENST00000525079.5

TRAPPC4-205, Transcript of trafficking protein particle complex 4, humanhuman

TSL 3

Gene TRAPPC4, Length 768 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC4-205ENST00000525079 GUCA1BQ9UMX6 200 aa12.75□□□□□ -0.37
TRAPPC4-205ENST00000525079 RP1P56715 2156 aa12.74□□□□□ -0.37
TRAPPC4-205ENST00000525079 TRBV23OR9-2A0A075B6M9 112 aa12.74□□□□□ -0.37
TRAPPC4-205ENST00000525079 TCRBV7S2A1N4TA0A589 114 aa12.74□□□□□ -0.37
TRAPPC4-205ENST00000525079 MIF4GDA9UHW6 222 aaKnown RBP12.74□□□□□ -0.37
TRAPPC4-205ENST00000525079 AGRPO00253 132 aa12.74□□□□□ -0.37
TRAPPC4-205ENST00000525079 BUD23O43709 281 aaKnown RBP12.74□□□□□ -0.37
TRAPPC4-205ENST00000525079 TLX3O43711 291 aaPredicted RBP12.74□□□□□ -0.37
TRAPPC4-205ENST00000525079 BRINP1O60477 761 aa12.74□□□□□ -0.37
TRAPPC4-205ENST00000525079 DNAJC6O75061 913 aa12.74□□□□□ -0.37
TRAPPC4-205ENST00000525079 ECEL1O95672 775 aa12.74□□□□□ -0.37
TRAPPC4-205ENST00000525079 RPLP0P05388 317 aaKnown RBP12.74□□□□□ -0.37
TRAPPC4-205ENST00000525079 TNNT3P45378 269 aaPredicted RBP12.74□□□□□ -0.37
TRAPPC4-205ENST00000525079 MPP3Q13368 585 aa12.74□□□□□ -0.37
TRAPPC4-205ENST00000525079 OLIG2Q13516 323 aa12.74□□□□□ -0.37
TRAPPC4-205ENST00000525079 SPIDRQ14159 915 aa12.74□□□□□ -0.37
TRAPPC4-205ENST00000525079 HLTFQ14527 1009 aaKnown RBP eCLIP12.74□□□□□ -0.37
TRAPPC4-205ENST00000525079 SLC1A5Q15758 541 aa12.74□□□□□ -0.37
TRAPPC4-205ENST00000525079 ANKRD20A2Q5SQ80 823 aa12.74□□□□□ -0.37
TRAPPC4-205ENST00000525079 CERCAMQ5T4B2 595 aa12.74□□□□□ -0.37
TRAPPC4-205ENST00000525079 ANKRD20A1Q5TYW2 823 aa12.74□□□□□ -0.37
TRAPPC4-205ENST00000525079 ANKRD20A3Q5VUR7 823 aa12.74□□□□□ -0.37
TRAPPC4-205ENST00000525079 FOXR1Q6PIV2 292 aa12.74□□□□□ -0.37
TRAPPC4-205ENST00000525079 CHST15Q7LFX5 561 aaPredicted RBP12.74□□□□□ -0.37
TRAPPC4-205ENST00000525079 GALNT13Q8IUC8 556 aa12.74□□□□□ -0.37
TRAPPC4-205ENST00000525079 CCDC110Q8TBZ0 833 aa12.74□□□□□ -0.37
TRAPPC4-205ENST00000525079 BLOC1S5Q8TDH9 187 aa12.74□□□□□ -0.37
TRAPPC4-205ENST00000525079 HNRNPLLQ8WVV9 542 aaKnown RBP12.74□□□□□ -0.37
TRAPPC4-205ENST00000525079 DCBLD2Q96PD2 775 aa12.74□□□□□ -0.37
TRAPPC4-205ENST00000525079 APOL2Q9BQE5 337 aa12.74□□□□□ -0.37
TRAPPC4-205ENST00000525079 FICDQ9BVA6 458 aa12.74□□□□□ -0.37
TRAPPC4-205ENST00000525079 CDH19Q9H159 772 aa12.74□□□□□ -0.37
TRAPPC4-205ENST00000525079 GBA3Q9H227 469 aa12.74□□□□□ -0.37
TRAPPC4-205ENST00000525079 LRRN3Q9H3W5 708 aa12.74□□□□□ -0.37
TRAPPC4-205ENST00000525079 ATXN10Q9UBB4 475 aa12.74□□□□□ -0.37
TRAPPC4-205ENST00000525079 RALYQ9UKM9 306 aaKnown RBP12.74□□□□□ -0.37
TRAPPC4-205ENST00000525079 ATXN7L1Q9ULK2 861 aaPredicted RBP12.74□□□□□ -0.37
TRAPPC4-205ENST00000525079 ENTPD2Q9Y5L3 495 aa12.74□□□□□ -0.37
TRAPPC4-205ENST00000525079 A0A1W2PQM1 296 aa12.73□□□□□ -0.37
TRAPPC4-205ENST00000525079 PMS2P1A4D2B8 440 aa12.73□□□□□ -0.37
TRAPPC4-205ENST00000525079 NTN3O00634 580 aaPredicted RBP12.73□□□□□ -0.37
TRAPPC4-205ENST00000525079 MTX2O75431 263 aa12.73□□□□□ -0.37
TRAPPC4-205ENST00000525079 SLC25A14O95258 325 aaPredicted RBP12.73□□□□□ -0.37
TRAPPC4-205ENST00000525079 EPOP01588 193 aa12.73□□□□□ -0.37
TRAPPC4-205ENST00000525079 GLB1P16278 677 aa12.73□□□□□ -0.37
TRAPPC4-205ENST00000525079 PSMB4P28070 264 aa12.73□□□□□ -0.37
TRAPPC4-205ENST00000525079 GEMP55040 296 aa12.73□□□□□ -0.37
TRAPPC4-205ENST00000525079 GABREP78334 506 aa12.73□□□□□ -0.37
TRAPPC4-205ENST00000525079 C3orf38Q5JPI3 329 aa12.73□□□□□ -0.37
TRAPPC4-205ENST00000525079 ZNF569Q5MCW4 686 aa12.73□□□□□ -0.37
TRAPPC4-205ENST00000525079 ITPRIPL1Q6GPH6 555 aa12.73□□□□□ -0.37
TRAPPC4-205ENST00000525079 CCNJLQ8IV13 435 aa12.73□□□□□ -0.37
TRAPPC4-205ENST00000525079 NAGSQ8N159 534 aa12.73□□□□□ -0.37
TRAPPC4-205ENST00000525079 ARL14Q8N4G2 192 aa12.73□□□□□ -0.37
TRAPPC4-205ENST00000525079 TTC30BQ8N4P2 665 aa12.73□□□□□ -0.37
TRAPPC4-205ENST00000525079 RNF10Q8N5U6 811 aaKnown RBP12.73□□□□□ -0.37
TRAPPC4-205ENST00000525079 TRAM1L1Q8N609 369 aa12.73□□□□□ -0.37
TRAPPC4-205ENST00000525079 OR6C4Q8NGE1 309 aa12.73□□□□□ -0.37
TRAPPC4-205ENST00000525079 HES6Q96HZ4 224 aa12.73□□□□□ -0.37
TRAPPC4-205ENST00000525079 GFM1Q96RP9 751 aaKnown RBP12.73□□□□□ -0.37
TRAPPC4-205ENST00000525079 FERMT1Q9BQL6 677 aa12.73□□□□□ -0.37
TRAPPC4-205ENST00000525079 FSD1LQ9BXM9 530 aa12.73□□□□□ -0.37
TRAPPC4-205ENST00000525079 FOXP3Q9BZS1 431 aa12.73□□□□□ -0.37
TRAPPC4-205ENST00000525079 OR2AG1Q9H205 316 aa12.73□□□□□ -0.37
TRAPPC4-205ENST00000525079 RAD18Q9NS91 495 aa12.73□□□□□ -0.37
TRAPPC4-205ENST00000525079 SATB2Q9UPW6 733 aa12.73□□□□□ -0.37
TRAPPC4-205ENST00000525079 KCNK6Q9Y257 313 aa12.73□□□□□ -0.37
TRAPPC4-205ENST00000525079 R3HDM2Q9Y2K5 976 aaKnown RBP12.73□□□□□ -0.37
TRAPPC4-205ENST00000525079 A0A1W2PNU3 283 aaPredicted RBP12.72□□□□□ -0.37
TRAPPC4-205ENST00000525079 GOLGA6L9A6NEM1 432 aa12.72□□□□□ -0.37
TRAPPC4-205ENST00000525079 RHPN2P1A8MT19 583 aa12.72□□□□□ -0.37
TRAPPC4-205ENST00000525079 GRID2O43424 1007 aa12.72□□□□□ -0.37
TRAPPC4-205ENST00000525079 KRT86O43790 486 aa12.72□□□□□ -0.37
TRAPPC4-205ENST00000525079 TCEA3O75764 348 aa12.72□□□□□ -0.37
TRAPPC4-205ENST00000525079 ANXA9O76027 345 aa12.72□□□□□ -0.37
TRAPPC4-205ENST00000525079 STK10O94804 968 aaKnown RBP12.72□□□□□ -0.37
TRAPPC4-205ENST00000525079 EML2O95834 649 aa12.72□□□□□ -0.37
TRAPPC4-205ENST00000525079 ACP5P13686 325 aa12.72□□□□□ -0.37
TRAPPC4-205ENST00000525079 ZNF8P17098 575 aaPredicted RBP12.72□□□□□ -0.37
TRAPPC4-205ENST00000525079 HLA-DPA1P20036 260 aa12.72□□□□□ -0.37
TRAPPC4-205ENST00000525079 PDX1P52945 283 aa12.72□□□□□ -0.37
TRAPPC4-205ENST00000525079 OR1D5P58170 312 aa12.72□□□□□ -0.37
TRAPPC4-205ENST00000525079 DCDC1P59894 354 aa12.72□□□□□ -0.37
TRAPPC4-205ENST00000525079 BIRC2Q13490 618 aa12.72□□□□□ -0.37
TRAPPC4-205ENST00000525079 SPARCL1Q14515 664 aa12.72□□□□□ -0.37
TRAPPC4-205ENST00000525079 PRPSAP1Q14558 356 aa12.72□□□□□ -0.37
TRAPPC4-205ENST00000525079 PTPRCAPQ14761 206 aa12.72□□□□□ -0.37
TRAPPC4-205ENST00000525079 CRTC3Q6UUV7 619 aa12.72□□□□□ -0.37
TRAPPC4-205ENST00000525079 B3GNT8Q7Z7M8 397 aa12.72□□□□□ -0.37
TRAPPC4-205ENST00000525079 ADGRG6Q86SQ4 1221 aa12.72□□□□□ -0.37
TRAPPC4-205ENST00000525079 TAB3Q8N5C8 712 aaPredicted RBP12.72□□□□□ -0.37
TRAPPC4-205ENST00000525079 FAM71DQ8N9W8 422 aa12.72□□□□□ -0.37
TRAPPC4-205ENST00000525079 WDR48Q8TAF3 677 aa12.72□□□□□ -0.37
TRAPPC4-205ENST00000525079 GLYATL1Q969I3 302 aa12.72□□□□□ -0.37
TRAPPC4-205ENST00000525079 SPATA13Q96N96 652 aa12.72□□□□□ -0.37
TRAPPC4-205ENST00000525079 SRPK1Q96SB4 655 aaKnown RBP12.72□□□□□ -0.37
TRAPPC4-205ENST00000525079 ZSCAN5AQ9BUG6 496 aa12.72□□□□□ -0.37
TRAPPC4-205ENST00000525079 TSGA10Q9BZW7 698 aa12.72□□□□□ -0.37
TRAPPC4-205ENST00000525079 POLR1BQ9H9Y6 1135 aa12.72□□□□□ -0.37
TRAPPC4-205ENST00000525079 EPB41L5Q9HCM4 733 aa12.72□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms