RNA–Protein interactions for RNA: ENST00000524454.1

VPS11-201, Transcript of VPS11, CORVET/HOPS core subunit, humanhuman

TSL 2

Gene VPS11, Length 626 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS11-201ENST00000524454 ABCA7Q8IZY2 2146 aa7.06□□□□□ -1.28
VPS11-201ENST00000524454 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa7.06□□□□□ -1.28
VPS11-201ENST00000524454 TMEM114B3SHH9 223 aa7.06□□□□□ -1.28
VPS11-201ENST00000524454 LDB2O43679 373 aa7.06□□□□□ -1.28
VPS11-201ENST00000524454 DNAJC6O75061 913 aa7.06□□□□□ -1.28
VPS11-201ENST00000524454 PROCP04070 461 aa7.06□□□□□ -1.28
VPS11-201ENST00000524454 SERPINE1P05121 402 aa7.06□□□□□ -1.28
VPS11-201ENST00000524454 ERVK-10P10266 1014 aa7.06□□□□□ -1.28
VPS11-201ENST00000524454 PABPC1P11940 636 aaKnown RBP7.06□□□□□ -1.28
VPS11-201ENST00000524454 STMN1P16949 149 aa7.06□□□□□ -1.28
VPS11-201ENST00000524454 TGM1P22735 817 aa7.06□□□□□ -1.28
VPS11-201ENST00000524454 ARNTP27540 789 aa7.06□□□□□ -1.28
VPS11-201ENST00000524454 NMBRP28336 390 aa7.06□□□□□ -1.28
VPS11-201ENST00000524454 ACVRL1P37023 503 aa7.06□□□□□ -1.28
VPS11-201ENST00000524454 CTSOP43234 321 aaPredicted RBP7.06□□□□□ -1.28
VPS11-201ENST00000524454 GRIA4P48058 902 aa7.06□□□□□ -1.28
VPS11-201ENST00000524454 ADARP55265 1226 aaKnown RBP7.06□□□□□ -1.28
VPS11-201ENST00000524454 OCRLQ01968 901 aa7.06□□□□□ -1.28
VPS11-201ENST00000524454 SULT2A1Q06520 285 aa7.06□□□□□ -1.28
VPS11-201ENST00000524454 CDH18Q13634 790 aa7.06□□□□□ -1.28
VPS11-201ENST00000524454 POU6F1Q14863 301 aa7.06□□□□□ -1.28
VPS11-201ENST00000524454 SETDB1Q15047 1291 aa7.06□□□□□ -1.28
VPS11-201ENST00000524454 SF3A2Q15428 464 aaKnown RBP7.06□□□□□ -1.28
VPS11-201ENST00000524454 TAF1AQ15573 450 aaPredicted RBP7.06□□□□□ -1.28
VPS11-201ENST00000524454 TBCCQ15814 346 aa7.06□□□□□ -1.28
VPS11-201ENST00000524454 TYSND1Q2T9J0 566 aa7.06□□□□□ -1.28
VPS11-201ENST00000524454 PLK5Q496M5 336 aa7.06□□□□□ -1.28
VPS11-201ENST00000524454 PREPLQ4J6C6 727 aaPredicted RBP7.06□□□□□ -1.28
VPS11-201ENST00000524454 FNDC3BQ53EP0 1204 aaKnown RBP7.06□□□□□ -1.28
VPS11-201ENST00000524454 AARS2Q5JTZ9 985 aaKnown RBP7.06□□□□□ -1.28
VPS11-201ENST00000524454 SIRPB2Q5JXA9 342 aa7.06□□□□□ -1.28
VPS11-201ENST00000524454 MBLAC2Q68D91 279 aa7.06□□□□□ -1.28
VPS11-201ENST00000524454 IL31Q6EBC2 164 aa7.06□□□□□ -1.28
VPS11-201ENST00000524454 LAIR1Q6GTX8 287 aa7.06□□□□□ -1.28
VPS11-201ENST00000524454 TCEAL6Q6IPX3 200 aa7.06□□□□□ -1.28
VPS11-201ENST00000524454 SDE2Q6IQ49 451 aa7.06□□□□□ -1.28
VPS11-201ENST00000524454 NEPROQ6NW34 567 aa7.06□□□□□ -1.28
VPS11-201ENST00000524454 KIAA1324Q6UXG2 1013 aaKnown RBP7.06□□□□□ -1.28
VPS11-201ENST00000524454 TRMT11Q7Z4G4 463 aaKnown RBP7.06□□□□□ -1.28
VPS11-201ENST00000524454 ADIPOR2Q86V24 386 aa7.06□□□□□ -1.28
VPS11-201ENST00000524454 ZNF354CQ86Y25 554 aa7.06□□□□□ -1.28
VPS11-201ENST00000524454 TMEFF1Q8IYR6 380 aa7.06□□□□□ -1.28
VPS11-201ENST00000524454 APCDD1Q8J025 514 aa7.06□□□□□ -1.28
VPS11-201ENST00000524454 PGBD5Q8N414 524 aa7.06□□□□□ -1.28
VPS11-201ENST00000524454 DDX51Q8N8A6 666 aaKnown RBP eCLIP7.06□□□□□ -1.28
VPS11-201ENST00000524454 NETO2Q8NC67 525 aa7.06□□□□□ -1.28
VPS11-201ENST00000524454 OR52K2Q8NGK3 314 aa7.06□□□□□ -1.28
VPS11-201ENST00000524454 OR13J1Q8NGT2 312 aa7.06□□□□□ -1.28
VPS11-201ENST00000524454 OR6Y1Q8NGX8 325 aa7.06□□□□□ -1.28
VPS11-201ENST00000524454 GDAP1Q8TB36 358 aa7.06□□□□□ -1.28
VPS11-201ENST00000524454 TCEAL3Q969E4 200 aa7.06□□□□□ -1.28
VPS11-201ENST00000524454 CCDC126Q96EE4 140 aa7.06□□□□□ -1.28
VPS11-201ENST00000524454 ALG14Q96F25 216 aa7.06□□□□□ -1.28
VPS11-201ENST00000524454 TUBGCP5Q96RT8 1024 aa7.06□□□□□ -1.28
VPS11-201ENST00000524454 ELAC2Q9BQ52 826 aaKnown RBP7.06□□□□□ -1.28
VPS11-201ENST00000524454 FEM1AQ9BSK4 669 aa7.06□□□□□ -1.28
VPS11-201ENST00000524454 TUBB6Q9BUF5 446 aa7.06□□□□□ -1.28
VPS11-201ENST00000524454 TSSK1BQ9BXA7 367 aa7.06□□□□□ -1.28
VPS11-201ENST00000524454 CEP44Q9C0F1 390 aa7.06□□□□□ -1.28
VPS11-201ENST00000524454 MUC3BQ9H195 1237 aa7.06□□□□□ -1.28
VPS11-201ENST00000524454 DUSP15Q9H1R2 295 aaPredicted RBP7.06□□□□□ -1.28
VPS11-201ENST00000524454 CD248Q9HCU0 757 aa7.06□□□□□ -1.28
VPS11-201ENST00000524454 PCMTD2Q9NV79 361 aa7.06□□□□□ -1.28
VPS11-201ENST00000524454 THAP1Q9NVV9 213 aa7.06□□□□□ -1.28
VPS11-201ENST00000524454 NLE1Q9NVX2 485 aaPredicted RBP7.06□□□□□ -1.28
VPS11-201ENST00000524454 KCNK4Q9NYG8 393 aa7.06□□□□□ -1.28
VPS11-201ENST00000524454 UBP1Q9NZI7 540 aa7.06□□□□□ -1.28
VPS11-201ENST00000524454 KIAA1522Q9P206 1035 aaPredicted RBP7.06□□□□□ -1.28
VPS11-201ENST00000524454 SLC17A7Q9P2U7 560 aa7.06□□□□□ -1.28
VPS11-201ENST00000524454 EBF1Q9UH73 591 aa7.06□□□□□ -1.28
VPS11-201ENST00000524454 TLK1Q9UKI8 766 aa7.06□□□□□ -1.28
VPS11-201ENST00000524454 FBXO5Q9UKT4 447 aa7.06□□□□□ -1.28
VPS11-201ENST00000524454 INTS6Q9UL03 887 aaKnown RBP7.06□□□□□ -1.28
VPS11-201ENST00000524454 CYP8B1Q9UNU6 501 aa7.06□□□□□ -1.28
VPS11-201ENST00000524454 SLC12A4Q9UP95 1085 aa7.06□□□□□ -1.28
VPS11-201ENST00000524454 SLC27A6Q9Y2P4 619 aa7.06□□□□□ -1.28
VPS11-201ENST00000524454 PSAT1Q9Y617 370 aa7.06□□□□□ -1.28
VPS11-201ENST00000524454 COMMD10Q9Y6G5 202 aa7.06□□□□□ -1.28
VPS11-201ENST00000524454 BPTFQ12830 3046 aa7.06□□□□□ -1.28
VPS11-201ENST00000524454 A0A096LPK6 155 aa7.05□□□□□ -1.28
VPS11-201ENST00000524454 A0A0D9SEW6 157 aa7.05□□□□□ -1.28
VPS11-201ENST00000524454 CFAP73A6NFT4 308 aa7.05□□□□□ -1.28
VPS11-201ENST00000524454 C2orf81A6NN90 581 aa7.05□□□□□ -1.28
VPS11-201ENST00000524454 PATE3B3GLJ2 98 aa7.05□□□□□ -1.28
VPS11-201ENST00000524454 H0Y626 953 aa7.05□□□□□ -1.28
VPS11-201ENST00000524454 TRAFD1O14545 582 aaPredicted RBP7.05□□□□□ -1.28
VPS11-201ENST00000524454 ST8SIA5O15466 376 aa7.05□□□□□ -1.28
VPS11-201ENST00000524454 FZD6O60353 706 aa7.05□□□□□ -1.28
VPS11-201ENST00000524454 UGT1A9O60656 530 aa7.05□□□□□ -1.28
VPS11-201ENST00000524454 TMCC1O94876 653 aa7.05□□□□□ -1.28
VPS11-201ENST00000524454 VAPBO95292 243 aa7.05□□□□□ -1.28
VPS11-201ENST00000524454 GSRP00390 522 aa7.05□□□□□ -1.28
VPS11-201ENST00000524454 AHSGP02765 367 aa7.05□□□□□ -1.28
VPS11-201ENST00000524454 EPHX1P07099 455 aa7.05□□□□□ -1.28
VPS11-201ENST00000524454 RETP07949 1114 aa7.05□□□□□ -1.28
VPS11-201ENST00000524454 ALOX15P16050 662 aaPredicted RBP7.05□□□□□ -1.28
VPS11-201ENST00000524454 MZF1P28698 734 aaPredicted RBP7.05□□□□□ -1.28
VPS11-201ENST00000524454 CNR2P34972 360 aa7.05□□□□□ -1.28
VPS11-201ENST00000524454 P2RY2P41231 377 aa7.05□□□□□ -1.28
VPS11-201ENST00000524454 CSKP41240 450 aa7.05□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms