RNA–Protein interactions for RNA: ENST00000523685.5

CTNNA1-239, Transcript of catenin alpha 1, humanhuman

TSL 3

Gene CTNNA1, Length 694 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-239ENST00000523685 INTUQ9ULD6 942 aa5.39□□□□□ -1.55
CTNNA1-239ENST00000523685 ERVW-1Q9UQF0 538 aa5.39□□□□□ -1.55
CTNNA1-239ENST00000523685 PCDHGA1Q9Y5H4 931 aa5.39□□□□□ -1.55
CTNNA1-239ENST00000523685 PTPRBP23467 1997 aa5.38□□□□□ -1.55
CTNNA1-239ENST00000523685 FLNBO75369 2602 aaKnown RBP5.38□□□□□ -1.55
CTNNA1-239ENST00000523685 EDDM13A0A1B0GTR0 161 aa5.38□□□□□ -1.55
CTNNA1-239ENST00000523685 A0A1W2PR77 199 aa5.38□□□□□ -1.55
CTNNA1-239ENST00000523685 E9PAM4 449 aa5.38□□□□□ -1.55
CTNNA1-239ENST00000523685 TLR4O00206 839 aa5.38□□□□□ -1.55
CTNNA1-239ENST00000523685 O00370 1275 aa5.38□□□□□ -1.55
CTNNA1-239ENST00000523685 CAPN9O14815 690 aa5.38□□□□□ -1.55
CTNNA1-239ENST00000523685 CETN3O15182 167 aa5.38□□□□□ -1.55
CTNNA1-239ENST00000523685 IRAK2O43187 625 aa5.38□□□□□ -1.55
CTNNA1-239ENST00000523685 MTSS1O43312 755 aa5.38□□□□□ -1.55
CTNNA1-239ENST00000523685 RTN2O75298 545 aa5.38□□□□□ -1.55
CTNNA1-239ENST00000523685 TOX4O94842 621 aa5.38□□□□□ -1.55
CTNNA1-239ENST00000523685 CNOT4O95628 575 aaKnown RBP5.38□□□□□ -1.55
CTNNA1-239ENST00000523685 MYL1P05976 194 aa5.38□□□□□ -1.55
CTNNA1-239ENST00000523685 C1SP09871 688 aa5.38□□□□□ -1.55
CTNNA1-239ENST00000523685 SETSIPP0DME0 302 aa5.38□□□□□ -1.55
CTNNA1-239ENST00000523685 VSIG10L2P0DP72 767 aa5.38□□□□□ -1.55
CTNNA1-239ENST00000523685 VDRP11473 427 aa5.38□□□□□ -1.55
CTNNA1-239ENST00000523685 GOT1P17174 413 aa5.38□□□□□ -1.55
CTNNA1-239ENST00000523685 CMA1P23946 247 aa5.38□□□□□ -1.55
CTNNA1-239ENST00000523685 ADSLP30566 484 aaPredicted RBP5.38□□□□□ -1.55
CTNNA1-239ENST00000523685 NNMTP40261 264 aa5.38□□□□□ -1.55
CTNNA1-239ENST00000523685 CCR5P51681 352 aa5.38□□□□□ -1.55
CTNNA1-239ENST00000523685 METAP1P53582 386 aa5.38□□□□□ -1.55
CTNNA1-239ENST00000523685 ADPRHP54922 357 aa5.38□□□□□ -1.55
CTNNA1-239ENST00000523685 NXPH1P58417 271 aa5.38□□□□□ -1.55
CTNNA1-239ENST00000523685 RAC3P60763 192 aa5.38□□□□□ -1.55
CTNNA1-239ENST00000523685 ECT2LQ008S8 904 aa5.38□□□□□ -1.55
CTNNA1-239ENST00000523685 MGAT2Q10469 447 aa5.38□□□□□ -1.55
CTNNA1-239ENST00000523685 GTF2H3Q13889 308 aa5.38□□□□□ -1.55
CTNNA1-239ENST00000523685 NFIL3Q16649 462 aa5.38□□□□□ -1.55
CTNNA1-239ENST00000523685 ACCSLQ4AC99 568 aa5.38□□□□□ -1.55
CTNNA1-239ENST00000523685 HS1BP3Q53T59 392 aa5.38□□□□□ -1.55
CTNNA1-239ENST00000523685 TAF1BQ53T94 588 aaPredicted RBP5.38□□□□□ -1.55
CTNNA1-239ENST00000523685 DCAF6Q58WW2 860 aa5.38□□□□□ -1.55
CTNNA1-239ENST00000523685 C9orf64Q5T6V5 341 aa5.38□□□□□ -1.55
CTNNA1-239ENST00000523685 RAP1GAP2Q684P5 730 aa5.38□□□□□ -1.55
CTNNA1-239ENST00000523685 ATL3Q6DD88 541 aa5.38□□□□□ -1.55
CTNNA1-239ENST00000523685 NXNQ6DKJ4 435 aa5.38□□□□□ -1.55
CTNNA1-239ENST00000523685 PMF1Q6P1K2 205 aa5.38□□□□□ -1.55
CTNNA1-239ENST00000523685 MSANTD2Q6P1R3 559 aa5.38□□□□□ -1.55
CTNNA1-239ENST00000523685 ARHGEF18Q6ZSZ5 1173 aa5.38□□□□□ -1.55
CTNNA1-239ENST00000523685 PRPF39Q86UA1 669 aaKnown RBP5.38□□□□□ -1.55
CTNNA1-239ENST00000523685 CHSY1Q86X52 802 aa5.38□□□□□ -1.55
CTNNA1-239ENST00000523685 CIR1Q86X95 450 aaPredicted RBP5.38□□□□□ -1.55
CTNNA1-239ENST00000523685 WDR75Q8IWA0 830 aaKnown RBP5.38□□□□□ -1.55
CTNNA1-239ENST00000523685 HSCBQ8IWL3 235 aa5.38□□□□□ -1.55
CTNNA1-239ENST00000523685 APCDD1Q8J025 514 aa5.38□□□□□ -1.55
CTNNA1-239ENST00000523685 LGI2Q8N0V4 545 aa5.38□□□□□ -1.55
CTNNA1-239ENST00000523685 GUF1Q8N442 669 aaKnown RBP5.38□□□□□ -1.55
CTNNA1-239ENST00000523685 ZNF557Q8N988 423 aaPredicted RBP5.38□□□□□ -1.55
CTNNA1-239ENST00000523685 ANKRD53Q8N9V6 530 aa5.38□□□□□ -1.55
CTNNA1-239ENST00000523685 FIBINQ8TAL6 211 aa5.38□□□□□ -1.55
CTNNA1-239ENST00000523685 DQX1Q8TE96 717 aaKnown RBP5.38□□□□□ -1.55
CTNNA1-239ENST00000523685 TFAP2BQ92481 460 aa5.38□□□□□ -1.55
CTNNA1-239ENST00000523685 KLK6Q92876 244 aa5.38□□□□□ -1.55
CTNNA1-239ENST00000523685 FGF11Q92914 225 aa5.38□□□□□ -1.55
CTNNA1-239ENST00000523685 TTC17Q96AE7 1141 aa5.38□□□□□ -1.55
CTNNA1-239ENST00000523685 FAM149B1Q96BN6 582 aa5.38□□□□□ -1.55
CTNNA1-239ENST00000523685 LMLNQ96KR4 655 aa5.38□□□□□ -1.55
CTNNA1-239ENST00000523685 LGMNQ99538 433 aa5.38□□□□□ -1.55
CTNNA1-239ENST00000523685 TSG101Q99816 390 aa5.38□□□□□ -1.55
CTNNA1-239ENST00000523685 DDX50Q9BQ39 737 aaKnown RBP5.38□□□□□ -1.55
CTNNA1-239ENST00000523685 CNGB3Q9NQW8 809 aa5.38□□□□□ -1.55
CTNNA1-239ENST00000523685 XPO7Q9UIA9 1087 aaKnown RBP5.38□□□□□ -1.55
CTNNA1-239ENST00000523685 FZD4Q9ULV1 537 aa5.38□□□□□ -1.55
CTNNA1-239ENST00000523685 SCML1Q9UN30 329 aa5.38□□□□□ -1.55
CTNNA1-239ENST00000523685 CLCA2Q9UQC9 943 aa5.38□□□□□ -1.55
CTNNA1-239ENST00000523685 NAALADL1Q9UQQ1 740 aa5.38□□□□□ -1.55
CTNNA1-239ENST00000523685 CA5BQ9Y2D0 317 aa5.38□□□□□ -1.55
CTNNA1-239ENST00000523685 SETXQ7Z333 2677 aaKnown RBP5.37□□□□□ -1.55
CTNNA1-239ENST00000523685 CKAP5Q14008 2032 aa5.37□□□□□ -1.55
CTNNA1-239ENST00000523685 SYNJ2BP-COX16A0A087WUM0 186 aa5.37□□□□□ -1.55
CTNNA1-239ENST00000523685 TARSL2A2RTX5 802 aaKnown RBP5.37□□□□□ -1.55
CTNNA1-239ENST00000523685 PMS2P1A4D2B8 440 aa5.37□□□□□ -1.55
CTNNA1-239ENST00000523685 CCDC154A6NI56 674 aa5.37□□□□□ -1.55
CTNNA1-239ENST00000523685 FAM171A2A8MVW0 826 aa5.37□□□□□ -1.55
CTNNA1-239ENST00000523685 PYCARD-AS1I3L0S3 204 aa5.37□□□□□ -1.55
CTNNA1-239ENST00000523685 TRIM38O00635 465 aa5.37□□□□□ -1.55
CTNNA1-239ENST00000523685 SLC31A1O15431 190 aa5.37□□□□□ -1.55
CTNNA1-239ENST00000523685 YKT6O15498 198 aa5.37□□□□□ -1.55
CTNNA1-239ENST00000523685 FFAR2O15552 330 aa5.37□□□□□ -1.55
CTNNA1-239ENST00000523685 PAPSS1O43252 624 aaPredicted RBP5.37□□□□□ -1.55
CTNNA1-239ENST00000523685 HTRA2O43464 458 aaPredicted RBP5.37□□□□□ -1.55
CTNNA1-239ENST00000523685 LUC7L3O95232 432 aaKnown RBP5.37□□□□□ -1.55
CTNNA1-239ENST00000523685 MT-CO3P00414 261 aa5.37□□□□□ -1.55
CTNNA1-239ENST00000523685 IGLV3-27P01718 113 aa5.37□□□□□ -1.55
CTNNA1-239ENST00000523685 APOEP02649 317 aa5.37□□□□□ -1.55
CTNNA1-239ENST00000523685 SRPRAP08240 638 aaKnown RBP5.37□□□□□ -1.55
CTNNA1-239ENST00000523685 CDK4P11802 303 aa5.37□□□□□ -1.55
CTNNA1-239ENST00000523685 MYF5P13349 255 aa5.37□□□□□ -1.55
CTNNA1-239ENST00000523685 PLA2G2AP14555 144 aa5.37□□□□□ -1.55
CTNNA1-239ENST00000523685 PDGFRAP16234 1089 aa5.37□□□□□ -1.55
CTNNA1-239ENST00000523685 ZNF18P17022 549 aa5.37□□□□□ -1.55
CTNNA1-239ENST00000523685 CKMT2P17540 419 aa5.37□□□□□ -1.55
CTNNA1-239ENST00000523685 TACR2P21452 398 aa5.37□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms