RNA–Protein interactions for RNA: ENST00000522730.1

CTNNA1-235, Transcript of catenin alpha 1, humanhuman

TSL 2

Gene CTNNA1, Length 750 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-235ENST00000522730 TRIM14Q14142 442 aa10.17□□□□□ -0.78
CTNNA1-235ENST00000522730 C16orf72Q14CZ0 275 aa10.17□□□□□ -0.78
CTNNA1-235ENST00000522730 QPCTQ16769 361 aa10.17□□□□□ -0.78
CTNNA1-235ENST00000522730 PYCR3Q53H96 274 aa10.17□□□□□ -0.78
CTNNA1-235ENST00000522730 ZNF648Q5T619 568 aaPredicted RBP10.17□□□□□ -0.78
CTNNA1-235ENST00000522730 ALS2CLQ60I27 953 aa10.17□□□□□ -0.78
CTNNA1-235ENST00000522730 PCSK4Q6UW60 755 aa10.17□□□□□ -0.78
CTNNA1-235ENST00000522730 ZNF574Q6ZN55 896 aaPredicted RBP10.17□□□□□ -0.78
CTNNA1-235ENST00000522730 ZNF605Q86T29 641 aa10.17□□□□□ -0.78
CTNNA1-235ENST00000522730 VASH2Q86V25 355 aa10.17□□□□□ -0.78
CTNNA1-235ENST00000522730 NAGSQ8N159 534 aa10.17□□□□□ -0.78
CTNNA1-235ENST00000522730 SPC24Q8NBT2 197 aa10.17□□□□□ -0.78
CTNNA1-235ENST00000522730 AHCYL2Q96HN2 611 aaKnown RBP10.17□□□□□ -0.78
CTNNA1-235ENST00000522730 DNAJC7Q99615 494 aa10.17□□□□□ -0.78
CTNNA1-235ENST00000522730 SLC38A3Q99624 504 aa10.17□□□□□ -0.78
CTNNA1-235ENST00000522730 ADGRE3Q9BY15 652 aa10.17□□□□□ -0.78
CTNNA1-235ENST00000522730 KCNK4Q9NYG8 393 aa10.17□□□□□ -0.78
CTNNA1-235ENST00000522730 PKD2L2Q9NZM6 624 aa10.17□□□□□ -0.78
CTNNA1-235ENST00000522730 AMACRQ9UHK6 382 aa10.17□□□□□ -0.78
CTNNA1-235ENST00000522730 LCMT1Q9UIC8 334 aa10.17□□□□□ -0.78
CTNNA1-235ENST00000522730 SHOC2Q9UQ13 582 aa10.17□□□□□ -0.78
CTNNA1-235ENST00000522730 KCNK6Q9Y257 313 aa10.17□□□□□ -0.78
CTNNA1-235ENST00000522730 PCDHB11Q9Y5F2 797 aa10.17□□□□□ -0.78
CTNNA1-235ENST00000522730 OAS3Q9Y6K5 1087 aaKnown RBP10.17□□□□□ -0.78
CTNNA1-235ENST00000522730 ARHGEF17Q96PE2 2063 aaPredicted RBP10.16□□□□□ -0.78
CTNNA1-235ENST00000522730 AHCTF1Q8WYP5 2266 aa10.16□□□□□ -0.78
CTNNA1-235ENST00000522730 F5H423 210 aaPredicted RBP10.16□□□□□ -0.78
CTNNA1-235ENST00000522730 K7ENP7 123 aa10.16□□□□□ -0.78
CTNNA1-235ENST00000522730 ERVH48-1M5A8F1 160 aa10.16□□□□□ -0.78
CTNNA1-235ENST00000522730 EFSO43281 561 aa10.16□□□□□ -0.78
CTNNA1-235ENST00000522730 SPOPO43791 374 aa10.16□□□□□ -0.78
CTNNA1-235ENST00000522730 C1QL1O75973 258 aa10.16□□□□□ -0.78
CTNNA1-235ENST00000522730 EML2O95834 649 aa10.16□□□□□ -0.78
CTNNA1-235ENST00000522730 PYGLP06737 847 aa10.16□□□□□ -0.78
CTNNA1-235ENST00000522730 MMP2P08253 660 aa10.16□□□□□ -0.78
CTNNA1-235ENST00000522730 ACP5P13686 325 aa10.16□□□□□ -0.78
CTNNA1-235ENST00000522730 TEAD1P28347 426 aa10.16□□□□□ -0.78
CTNNA1-235ENST00000522730 MAN1A1P33908 653 aa10.16□□□□□ -0.78
CTNNA1-235ENST00000522730 MLLT3P42568 568 aaPredicted RBP10.16□□□□□ -0.78
CTNNA1-235ENST00000522730 SPINT3P49223 89 aa10.16□□□□□ -0.78
CTNNA1-235ENST00000522730 RPL26P61254 145 aaKnown RBP10.16□□□□□ -0.78
CTNNA1-235ENST00000522730 PDK1Q15118 436 aa10.16□□□□□ -0.78
CTNNA1-235ENST00000522730 ASTE1Q2TB18 679 aaPredicted RBP10.16□□□□□ -0.78
CTNNA1-235ENST00000522730 MANEAQ5SRI9 462 aa10.16□□□□□ -0.78
CTNNA1-235ENST00000522730 TMEM164Q5U3C3 297 aa10.16□□□□□ -0.78
CTNNA1-235ENST00000522730 KAZNQ674X7 775 aa10.16□□□□□ -0.78
CTNNA1-235ENST00000522730 CCDC70Q6NSX1 233 aa10.16□□□□□ -0.78
CTNNA1-235ENST00000522730 INO80CQ6PI98 192 aaPredicted RBP10.16□□□□□ -0.78
CTNNA1-235ENST00000522730 ZNF765Q7L2R6 523 aa10.16□□□□□ -0.78
CTNNA1-235ENST00000522730 LYSMD3Q7Z3D4 306 aa10.16□□□□□ -0.78
CTNNA1-235ENST00000522730 SLITRK4Q8IW52 837 aa10.16□□□□□ -0.78
CTNNA1-235ENST00000522730 ZNF843Q8N446 348 aa10.16□□□□□ -0.78
CTNNA1-235ENST00000522730 PLD5Q8N7P1 536 aa10.16□□□□□ -0.78
CTNNA1-235ENST00000522730 CNTD1Q8N815 330 aa10.16□□□□□ -0.78
CTNNA1-235ENST00000522730 FATE1Q969F0 183 aa10.16□□□□□ -0.78
CTNNA1-235ENST00000522730 FAF2Q96CS3 445 aa10.16□□□□□ -0.78
CTNNA1-235ENST00000522730 HDAC11Q96DB2 347 aa10.16□□□□□ -0.78
CTNNA1-235ENST00000522730 PDLIM2Q96JY6 352 aa10.16□□□□□ -0.78
CTNNA1-235ENST00000522730 CCDC74BQ96LY2 380 aa10.16□□□□□ -0.78
CTNNA1-235ENST00000522730 SPATA16Q9BXB7 569 aa10.16□□□□□ -0.78
CTNNA1-235ENST00000522730 GPR63Q9BZJ6 419 aa10.16□□□□□ -0.78
CTNNA1-235ENST00000522730 BRD8Q9H0E9 1235 aa10.16□□□□□ -0.78
CTNNA1-235ENST00000522730 ABHD10Q9NUJ1 306 aa10.16□□□□□ -0.78
CTNNA1-235ENST00000522730 UBP1Q9NZI7 540 aa10.16□□□□□ -0.78
CTNNA1-235ENST00000522730 FOXJ2Q9P0K8 574 aa10.16□□□□□ -0.78
CTNNA1-235ENST00000522730 DNPEPQ9ULA0 475 aa10.16□□□□□ -0.78
CTNNA1-235ENST00000522730 CNOT6Q9ULM6 557 aaKnown RBP10.16□□□□□ -0.78
CTNNA1-235ENST00000522730 RPL26L1Q9UNX3 145 aaKnown RBP10.16□□□□□ -0.78
CTNNA1-235ENST00000522730 PCDHGA7Q9Y5G6 932 aa10.16□□□□□ -0.78
CTNNA1-235ENST00000522730 PCYT1BQ9Y5K3 369 aaPredicted RBP10.16□□□□□ -0.78
CTNNA1-235ENST00000522730 IGHV5-10-1A0A0J9YXX1 117 aa10.15□□□□□ -0.78
CTNNA1-235ENST00000522730 SSU72P8A0A1W2PR75 194 aa10.15□□□□□ -0.78
CTNNA1-235ENST00000522730 FADS2P1A8MWK0 482 aa10.15□□□□□ -0.78
CTNNA1-235ENST00000522730 C9orf172C9J069 976 aa10.15□□□□□ -0.78
CTNNA1-235ENST00000522730 NVLO15381 856 aaKnown RBP10.15□□□□□ -0.78
CTNNA1-235ENST00000522730 MFAP3LO75121 409 aa10.15□□□□□ -0.78
CTNNA1-235ENST00000522730 PMPCBO75439 489 aa10.15□□□□□ -0.78
CTNNA1-235ENST00000522730 SLC25A14O95258 325 aaPredicted RBP10.15□□□□□ -0.78
CTNNA1-235ENST00000522730 COMTP21964 271 aa10.15□□□□□ -0.78
CTNNA1-235ENST00000522730 CSTF2P33240 577 aaKnown RBP eCLIP10.15□□□□□ -0.78
CTNNA1-235ENST00000522730 ARHGAP25P42331 645 aa10.15□□□□□ -0.78
CTNNA1-235ENST00000522730 GPR3P46089 330 aa10.15□□□□□ -0.78
CTNNA1-235ENST00000522730 IFI35P80217 286 aaPredicted RBP10.15□□□□□ -0.78
CTNNA1-235ENST00000522730 PPIDQ08752 370 aaKnown RBP10.15□□□□□ -0.78
CTNNA1-235ENST00000522730 TBX2Q13207 712 aaPredicted RBP10.15□□□□□ -0.78
CTNNA1-235ENST00000522730 ALG1LQ6GMV1 187 aa10.15□□□□□ -0.78
CTNNA1-235ENST00000522730 ZNF438Q7Z4V0 828 aa10.15□□□□□ -0.78
CTNNA1-235ENST00000522730 NT5DC3Q86UY8 548 aa10.15□□□□□ -0.78
CTNNA1-235ENST00000522730 NLRP8Q86W28 1048 aa10.15□□□□□ -0.78
CTNNA1-235ENST00000522730 C17orf82Q86X59 251 aaPredicted RBP10.15□□□□□ -0.78
CTNNA1-235ENST00000522730 FAM129CQ86XR2 697 aa10.15□□□□□ -0.78
CTNNA1-235ENST00000522730 RHOT1Q8IXI2 618 aa10.15□□□□□ -0.78
CTNNA1-235ENST00000522730 LSM14AQ8ND56 463 aaKnown RBP10.15□□□□□ -0.78
CTNNA1-235ENST00000522730 SPATA22Q8NHS9 363 aa10.15□□□□□ -0.78
CTNNA1-235ENST00000522730 SLC37A2Q8TED4 501 aa10.15□□□□□ -0.78
CTNNA1-235ENST00000522730 NCSTNQ92542 709 aa10.15□□□□□ -0.78
CTNNA1-235ENST00000522730 TMEM159Q96B96 161 aa10.15□□□□□ -0.78
CTNNA1-235ENST00000522730 SCARF2Q96GP6 870 aaPredicted RBP10.15□□□□□ -0.78
CTNNA1-235ENST00000522730 COX14Q96I36 57 aa10.15□□□□□ -0.78
CTNNA1-235ENST00000522730 WDR24Q96S15 920 aa10.15□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms