RNA–Protein interactions for RNA: ENST00000522539.1

BRF2-204, Transcript of BRF2, RNA polymerase III transcription initiation factor subunit, humanhuman

TSL 4

Gene BRF2, Length 473 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRF2-204ENST00000522539 TPM3P06753 285 aa12.19□□□□□ -0.46
BRF2-204ENST00000522539 ZNF30P17039 623 aa12.19□□□□□ -0.46
BRF2-204ENST00000522539 PSMA2P25787 234 aa12.19□□□□□ -0.46
BRF2-204ENST00000522539 MIPP30301 263 aa12.19□□□□□ -0.46
BRF2-204ENST00000522539 CDC25BP30305 580 aa12.19□□□□□ -0.46
BRF2-204ENST00000522539 MLLT10P55197 1068 aa12.19□□□□□ -0.46
BRF2-204ENST00000522539 SYCP1Q15431 976 aa12.19□□□□□ -0.46
BRF2-204ENST00000522539 ARMC12Q5T9G4 340 aa12.19□□□□□ -0.46
BRF2-204ENST00000522539 LRRC66Q68CR7 880 aa12.19□□□□□ -0.46
BRF2-204ENST00000522539 C16orf46Q6P387 395 aa12.19□□□□□ -0.46
BRF2-204ENST00000522539 KDELC2Q7Z4H8 507 aa12.19□□□□□ -0.46
BRF2-204ENST00000522539 TRIM74Q86UV6 250 aa12.19□□□□□ -0.46
BRF2-204ENST00000522539 CCDC13Q8IYE1 715 aa12.19□□□□□ -0.46
BRF2-204ENST00000522539 NCSTNQ92542 709 aa12.19□□□□□ -0.46
BRF2-204ENST00000522539 SH3KBP1Q96B97 665 aa12.19□□□□□ -0.46
BRF2-204ENST00000522539 MRFAP1L1Q96HT8 127 aa12.19□□□□□ -0.46
BRF2-204ENST00000522539 AGAP2Q99490 1192 aa12.19□□□□□ -0.46
BRF2-204ENST00000522539 HERPUD2Q9BSE4 406 aa12.19□□□□□ -0.46
BRF2-204ENST00000522539 LRRC4CQ9HCJ2 640 aa12.19□□□□□ -0.46
BRF2-204ENST00000522539 TAS2R14Q9NYV8 317 aa12.19□□□□□ -0.46
BRF2-204ENST00000522539 TBC1D29Q9UFV1 150 aa12.19□□□□□ -0.46
BRF2-204ENST00000522539 PCSK1NQ9UHG2 260 aa12.19□□□□□ -0.46
BRF2-204ENST00000522539 CD84Q9UIB8 345 aa12.19□□□□□ -0.46
BRF2-204ENST00000522539 CNOT6Q9ULM6 557 aaKnown RBP12.19□□□□□ -0.46
BRF2-204ENST00000522539 GOLGA6CA6NDK9 693 aa12.18□□□□□ -0.46
BRF2-204ENST00000522539 GOLGA6BA6NDN3 693 aa12.18□□□□□ -0.46
BRF2-204ENST00000522539 LILRA5A6NI73 299 aa12.18□□□□□ -0.46
BRF2-204ENST00000522539 MKRN2OSH3BPM6 223 aa12.18□□□□□ -0.46
BRF2-204ENST00000522539 LRCH4O75427 683 aa12.18□□□□□ -0.46
BRF2-204ENST00000522539 PDHA1P08559 390 aa12.18□□□□□ -0.46
BRF2-204ENST00000522539 FURINP09958 794 aa12.18□□□□□ -0.46
BRF2-204ENST00000522539 GOLGA6DP0CG33 693 aa12.18□□□□□ -0.46
BRF2-204ENST00000522539 ATP1A3P13637 1013 aa12.18□□□□□ -0.46
BRF2-204ENST00000522539 ZNF28P17035 718 aa12.18□□□□□ -0.46
BRF2-204ENST00000522539 NR1D1P20393 614 aa12.18□□□□□ -0.46
BRF2-204ENST00000522539 STC1P52823 247 aa12.18□□□□□ -0.46
BRF2-204ENST00000522539 NFATC2Q13469 925 aa12.18□□□□□ -0.46
BRF2-204ENST00000522539 DPYSL2Q16555 572 aa12.18□□□□□ -0.46
BRF2-204ENST00000522539 PPP6R3Q5H9R7 873 aaPredicted RBP12.18□□□□□ -0.46
BRF2-204ENST00000522539 FKBP15Q5T1M5 1219 aa12.18□□□□□ -0.46
BRF2-204ENST00000522539 ALG1LQ6GMV1 187 aa12.18□□□□□ -0.46
BRF2-204ENST00000522539 MARK2Q7KZI7 788 aaKnown RBP12.18□□□□□ -0.46
BRF2-204ENST00000522539 EXD1Q8NHP7 514 aa12.18□□□□□ -0.46
BRF2-204ENST00000522539 SMIM14Q96QK8 99 aa12.18□□□□□ -0.46
BRF2-204ENST00000522539 WDR24Q96S15 920 aa12.18□□□□□ -0.46
BRF2-204ENST00000522539 LDHAL6BQ9BYZ2 381 aaPredicted RBP12.18□□□□□ -0.46
BRF2-204ENST00000522539 TRIM7Q9C029 511 aa12.18□□□□□ -0.46
BRF2-204ENST00000522539 ZMYND15Q9H091 742 aa12.18□□□□□ -0.46
BRF2-204ENST00000522539 ZWILCHQ9H900 591 aa12.18□□□□□ -0.46
BRF2-204ENST00000522539 UCK1Q9HA47 277 aa12.18□□□□□ -0.46
BRF2-204ENST00000522539 PRDM8Q9NQV8 689 aa12.18□□□□□ -0.46
BRF2-204ENST00000522539 SEPT11Q9NVA2 429 aaKnown RBP12.18□□□□□ -0.46
BRF2-204ENST00000522539 PARVAQ9NVD7 372 aa12.18□□□□□ -0.46
BRF2-204ENST00000522539 ETNK2Q9NVF9 386 aa12.18□□□□□ -0.46
BRF2-204ENST00000522539 GOLGA6AQ9NYA3 693 aa12.18□□□□□ -0.46
BRF2-204ENST00000522539 PLEKHB1Q9UF11 243 aaPredicted RBP12.18□□□□□ -0.46
BRF2-204ENST00000522539 PCDHGA6Q9Y5G7 932 aa12.18□□□□□ -0.46
BRF2-204ENST00000522539 OAS3Q9Y6K5 1087 aaKnown RBP12.18□□□□□ -0.46
BRF2-204ENST00000522539 KIR2DS5A0A0G2JLQ3 304 aa12.17□□□□□ -0.46
BRF2-204ENST00000522539 A0A0G2JNG1 304 aa12.17□□□□□ -0.46
BRF2-204ENST00000522539 A0A0J9YYE9 177 aa12.17□□□□□ -0.46
BRF2-204ENST00000522539 KIR2DS3K7RE56 304 aa12.17□□□□□ -0.46
BRF2-204ENST00000522539 TOX3O15405 576 aaPredicted RBP12.17□□□□□ -0.46
BRF2-204ENST00000522539 PRPSAP2O60256 369 aa12.17□□□□□ -0.46
BRF2-204ENST00000522539 SERPINC1P01008 464 aa12.17□□□□□ -0.46
BRF2-204ENST00000522539 TRBC1P01850 177 aa12.17□□□□□ -0.46
BRF2-204ENST00000522539 PDGFAP04085 211 aa12.17□□□□□ -0.46
BRF2-204ENST00000522539 KRT7P08729 469 aa12.17□□□□□ -0.46
BRF2-204ENST00000522539 F3P13726 295 aa12.17□□□□□ -0.46
BRF2-204ENST00000522539 CTPS1P17812 591 aa12.17□□□□□ -0.46
BRF2-204ENST00000522539 CDK11BP21127 795 aaKnown RBP12.17□□□□□ -0.46
BRF2-204ENST00000522539 MMP13P45452 471 aa12.17□□□□□ -0.46
BRF2-204ENST00000522539 CLCNKAP51800 687 aa12.17□□□□□ -0.46
BRF2-204ENST00000522539 COPB1P53618 953 aaKnown RBP12.17□□□□□ -0.46
BRF2-204ENST00000522539 PMS2P54278 862 aa12.17□□□□□ -0.46
BRF2-204ENST00000522539 CDH6P55285 790 aa12.17□□□□□ -0.46
BRF2-204ENST00000522539 MAXP61244 160 aa12.17□□□□□ -0.46
BRF2-204ENST00000522539 UBE2IP63279 158 aaKnown RBP12.17□□□□□ -0.46
BRF2-204ENST00000522539 FANCCQ00597 558 aa12.17□□□□□ -0.46
BRF2-204ENST00000522539 IHHQ14623 411 aa12.17□□□□□ -0.46
BRF2-204ENST00000522539 KIR2DS5Q14953 304 aa12.17□□□□□ -0.46
BRF2-204ENST00000522539 CAPRIN2Q6IMN6 1127 aaKnown RBP12.17□□□□□ -0.46
BRF2-204ENST00000522539 PPP1R2P3Q6NXS1 205 aa12.17□□□□□ -0.46
BRF2-204ENST00000522539 ASB18Q6ZVZ8 466 aa12.17□□□□□ -0.46
BRF2-204ENST00000522539 LYSMD3Q7Z3D4 306 aa12.17□□□□□ -0.46
BRF2-204ENST00000522539 IRF2BP2Q7Z5L9 587 aa12.17□□□□□ -0.46
BRF2-204ENST00000522539 SLC9B2Q86UD5 537 aa12.17□□□□□ -0.46
BRF2-204ENST00000522539 PLXDC1Q8IUK5 500 aa12.17□□□□□ -0.46
BRF2-204ENST00000522539 APLFQ8IW19 511 aaPredicted RBP12.17□□□□□ -0.46
BRF2-204ENST00000522539 TEX26Q8N6G2 289 aa12.17□□□□□ -0.46
BRF2-204ENST00000522539 TEX19Q8NA77 164 aa12.17□□□□□ -0.46
BRF2-204ENST00000522539 AVL9Q8NBF6 648 aa12.17□□□□□ -0.46
BRF2-204ENST00000522539 GALNT11Q8NCW6 608 aa12.17□□□□□ -0.46
BRF2-204ENST00000522539 NEK11Q8NG66 645 aa12.17□□□□□ -0.46
BRF2-204ENST00000522539 C9orf72Q96LT7 481 aa12.17□□□□□ -0.46
BRF2-204ENST00000522539 ERGIC2Q96RQ1 377 aa12.17□□□□□ -0.46
BRF2-204ENST00000522539 LYSMD1Q96S90 227 aa12.17□□□□□ -0.46
BRF2-204ENST00000522539 RIOK2Q9BVS4 552 aaKnown RBP12.17□□□□□ -0.46
BRF2-204ENST00000522539 ULBP3Q9BZM4 244 aa12.17□□□□□ -0.46
BRF2-204ENST00000522539 STN1Q9H668 368 aaKnown RBP12.17□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 46.1 ms