RNA–Protein interactions for RNA: ENST00000521559.1

VPS13B-209, Transcript of vacuolar protein sorting 13 homolog B, humanhuman

TSL 3

Gene VPS13B, Length 466 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13B-209ENST00000521559 OIT3Q8WWZ8 545 aa3.4□□□□□ -1.87
VPS13B-209ENST00000521559 CPT1BQ92523 772 aa3.4□□□□□ -1.87
VPS13B-209ENST00000521559 CCT6BQ92526 530 aa3.4□□□□□ -1.87
VPS13B-209ENST00000521559 MIB2Q96AX9 1013 aa3.4□□□□□ -1.87
VPS13B-209ENST00000521559 EID2BQ96D98 161 aa3.4□□□□□ -1.87
VPS13B-209ENST00000521559 CTAGE1Q96RT6 745 aa3.4□□□□□ -1.87
VPS13B-209ENST00000521559 USP28Q96RU2 1077 aa3.4□□□□□ -1.87
VPS13B-209ENST00000521559 PCYT2Q99447 389 aa3.4□□□□□ -1.87
VPS13B-209ENST00000521559 RTKNQ9BST9 563 aa3.4□□□□□ -1.87
VPS13B-209ENST00000521559 C16orf70Q9BSU1 422 aa3.4□□□□□ -1.87
VPS13B-209ENST00000521559 MTG1Q9BT17 334 aaPredicted RBP3.4□□□□□ -1.87
VPS13B-209ENST00000521559 BRD8Q9H0E9 1235 aa3.4□□□□□ -1.87
VPS13B-209ENST00000521559 SLCO5A1Q9H2Y9 848 aa3.4□□□□□ -1.87
VPS13B-209ENST00000521559 SMARCAD1Q9H4L7 1026 aa3.4□□□□□ -1.87
VPS13B-209ENST00000521559 CATSPERBQ9H7T0 1116 aa3.4□□□□□ -1.87
VPS13B-209ENST00000521559 TTC12Q9H892 705 aaPredicted RBP3.4□□□□□ -1.87
VPS13B-209ENST00000521559 OBP2BQ9NPH6 170 aa3.4□□□□□ -1.87
VPS13B-209ENST00000521559 TMLHEQ9NVH6 421 aa3.4□□□□□ -1.87
VPS13B-209ENST00000521559 DACT1Q9NYF0 836 aa3.4□□□□□ -1.87
VPS13B-209ENST00000521559 NCKIPSDQ9NZQ3 722 aa3.4□□□□□ -1.87
VPS13B-209ENST00000521559 SLC25A13Q9UJS0 675 aa3.4□□□□□ -1.87
VPS13B-209ENST00000521559 FBXO2Q9UK22 296 aaPredicted RBP3.4□□□□□ -1.87
VPS13B-209ENST00000521559 RCOR1Q9UKL0 485 aa3.4□□□□□ -1.87
VPS13B-209ENST00000521559 BAG5Q9UL15 447 aa3.4□□□□□ -1.87
VPS13B-209ENST00000521559 CFAP45Q9UL16 551 aa3.4□□□□□ -1.87
VPS13B-209ENST00000521559 PCDHA10Q9Y5I2 948 aa3.4□□□□□ -1.87
VPS13B-209ENST00000521559 SRPRBQ9Y5M8 271 aaKnown RBP3.4□□□□□ -1.87
VPS13B-209ENST00000521559 CLIC4Q9Y696 253 aa3.4□□□□□ -1.87
VPS13B-209ENST00000521559 PTPRFP10586 1907 aa3.4□□□□□ -1.87
VPS13B-209ENST00000521559 ELP1O95163 1332 aa3.4□□□□□ -1.87
VPS13B-209ENST00000521559 VWA3AA6NCI4 1184 aa3.39□□□□□ -1.87
VPS13B-209ENST00000521559 KBTBD13C9JR72 458 aa3.39□□□□□ -1.87
VPS13B-209ENST00000521559 HAS3O00219 553 aa3.39□□□□□ -1.87
VPS13B-209ENST00000521559 SYT5O00445 386 aa3.39□□□□□ -1.87
VPS13B-209ENST00000521559 HNRNPRO43390 633 aaKnown RBP3.39□□□□□ -1.87
VPS13B-209ENST00000521559 CHMP2AO43633 222 aa3.39□□□□□ -1.87
VPS13B-209ENST00000521559 CREB3O43889 395 aa3.39□□□□□ -1.87
VPS13B-209ENST00000521559 HBP1O60381 514 aa3.39□□□□□ -1.87
VPS13B-209ENST00000521559 DKC1O60832 514 aaKnown RBP eCLIP3.39□□□□□ -1.87
VPS13B-209ENST00000521559 SLITRK3O94933 977 aa3.39□□□□□ -1.87
VPS13B-209ENST00000521559 STBD1O95210 358 aa3.39□□□□□ -1.87
VPS13B-209ENST00000521559 LYPLA2O95372 231 aa3.39□□□□□ -1.87
VPS13B-209ENST00000521559 LGALS2P05162 132 aa3.39□□□□□ -1.87
VPS13B-209ENST00000521559 ASGR1P07306 291 aa3.39□□□□□ -1.87
VPS13B-209ENST00000521559 MUTP22033 750 aa3.39□□□□□ -1.87
VPS13B-209ENST00000521559 RPA1P27694 616 aa3.39□□□□□ -1.87
VPS13B-209ENST00000521559 MARCKSP29966 332 aaPredicted RBP3.39□□□□□ -1.87
VPS13B-209ENST00000521559 CHKAP35790 457 aa3.39□□□□□ -1.87
VPS13B-209ENST00000521559 TCF7P36402 384 aaPredicted RBP3.39□□□□□ -1.87
VPS13B-209ENST00000521559 LONP1P36776 959 aaKnown RBP3.39□□□□□ -1.87
VPS13B-209ENST00000521559 QARSP47897 775 aaKnown RBP3.39□□□□□ -1.87
VPS13B-209ENST00000521559 PPM1FP49593 454 aaPredicted RBP3.39□□□□□ -1.87
VPS13B-209ENST00000521559 CYP2J2P51589 502 aa3.39□□□□□ -1.87
VPS13B-209ENST00000521559 PSMC5P62195 406 aa3.39□□□□□ -1.87
VPS13B-209ENST00000521559 PSMC6P62333 389 aa3.39□□□□□ -1.87
VPS13B-209ENST00000521559 CEBPZQ03701 1054 aaKnown RBP3.39□□□□□ -1.87
VPS13B-209ENST00000521559 LTBQ06643 244 aa3.39□□□□□ -1.87
VPS13B-209ENST00000521559 ITGA7Q13683 1181 aa3.39□□□□□ -1.87
VPS13B-209ENST00000521559 GPR18Q14330 331 aa3.39□□□□□ -1.87
VPS13B-209ENST00000521559 STK38Q15208 465 aa3.39□□□□□ -1.87
VPS13B-209ENST00000521559 RPS6KA2Q15349 733 aa3.39□□□□□ -1.87
VPS13B-209ENST00000521559 PLK5Q496M5 336 aa3.39□□□□□ -1.87
VPS13B-209ENST00000521559 ZNF585BQ52M93 769 aa3.39□□□□□ -1.87
VPS13B-209ENST00000521559 XKR3Q5GH77 459 aa3.39□□□□□ -1.87
VPS13B-209ENST00000521559 DNTTIP2Q5QJE6 756 aaKnown RBP3.39□□□□□ -1.87
VPS13B-209ENST00000521559 ASPHD1Q5U4P2 390 aa3.39□□□□□ -1.87
VPS13B-209ENST00000521559 NCAPH2Q6IBW4 605 aa3.39□□□□□ -1.87
VPS13B-209ENST00000521559 NFRKBQ6P4R8 1299 aa3.39□□□□□ -1.87
VPS13B-209ENST00000521559 Q6ZTK2 550 aa3.39□□□□□ -1.87
VPS13B-209ENST00000521559 C18orf65Q6ZTR6 163 aa3.39□□□□□ -1.87
VPS13B-209ENST00000521559 CCDC25Q86WR0 208 aa3.39□□□□□ -1.87
VPS13B-209ENST00000521559 SPATA2LQ8IUW3 424 aaPredicted RBP3.39□□□□□ -1.87
VPS13B-209ENST00000521559 FAM217AQ8IXS0 508 aa3.39□□□□□ -1.87
VPS13B-209ENST00000521559 C4orf19Q8IY42 314 aa3.39□□□□□ -1.87
VPS13B-209ENST00000521559 ATG16L2Q8NAA4 619 aa3.39□□□□□ -1.87
VPS13B-209ENST00000521559 ERMNQ8TAM6 284 aa3.39□□□□□ -1.87
VPS13B-209ENST00000521559 NEK9Q8TD19 979 aa3.39□□□□□ -1.87
VPS13B-209ENST00000521559 KCNG4Q8TDN1 519 aa3.39□□□□□ -1.87
VPS13B-209ENST00000521559 AFAP1L1Q8TED9 768 aa3.39□□□□□ -1.87
VPS13B-209ENST00000521559 RUBCNQ92622 972 aa3.39□□□□□ -1.87
VPS13B-209ENST00000521559 ATP6V0A1Q93050 837 aa3.39□□□□□ -1.87
VPS13B-209ENST00000521559 MED30Q96HR3 178 aa3.39□□□□□ -1.87
VPS13B-209ENST00000521559 AK8Q96MA6 479 aa3.39□□□□□ -1.87
VPS13B-209ENST00000521559 GLT1D1Q96MS3 346 aa3.39□□□□□ -1.87
VPS13B-209ENST00000521559 HSD17B14Q9BPX1 270 aa3.39□□□□□ -1.87
VPS13B-209ENST00000521559 EIF2AK1Q9BQI3 630 aaKnown RBP3.39□□□□□ -1.87
VPS13B-209ENST00000521559 POLR3CQ9BUI4 534 aaPredicted RBP3.39□□□□□ -1.87
VPS13B-209ENST00000521559 MECRQ9BV79 373 aa3.39□□□□□ -1.87
VPS13B-209ENST00000521559 KATNAL1Q9BW62 490 aa3.39□□□□□ -1.87
VPS13B-209ENST00000521559 SEZ6LQ9BYH1 1024 aa3.39□□□□□ -1.87
VPS13B-209ENST00000521559 RAB34Q9BZG1 259 aa3.39□□□□□ -1.87
VPS13B-209ENST00000521559 DCLK3Q9C098 648 aa3.39□□□□□ -1.87
VPS13B-209ENST00000521559 FTOQ9C0B1 505 aaKnown RBP eCLIP3.39□□□□□ -1.87
VPS13B-209ENST00000521559 C11orf49Q9H6J7 331 aa3.39□□□□□ -1.87
VPS13B-209ENST00000521559 AZI2Q9H6S1 392 aa3.39□□□□□ -1.87
VPS13B-209ENST00000521559 ACTR5Q9H9F9 607 aaPredicted RBP3.39□□□□□ -1.87
VPS13B-209ENST00000521559 IL21RQ9HBE5 538 aa3.39□□□□□ -1.87
VPS13B-209ENST00000521559 PLAC1Q9HBJ0 212 aa3.39□□□□□ -1.87
VPS13B-209ENST00000521559 PDE11AQ9HCR9 933 aa3.39□□□□□ -1.87
VPS13B-209ENST00000521559 TUFT1Q9NNX1 390 aa3.39□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 47.7 ms