RNA–Protein interactions for RNA: ENST00000520909.5

CLK4-207, Transcript of CDC like kinase 4, humanhuman

TSL 1 (best)

Gene CLK4, Length 1,305 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK4-207ENST00000520909 Q9N2J8 555 aa4.21□□□□□ -1.73
CLK4-207ENST00000520909 RIC8AQ9NPQ8 531 aa4.21□□□□□ -1.73
CLK4-207ENST00000520909 SLC25A13Q9UJS0 675 aa4.21□□□□□ -1.73
CLK4-207ENST00000520909 RCOR1Q9UKL0 485 aa4.21□□□□□ -1.73
CLK4-207ENST00000520909 CEP83Q9Y592 693 aa4.21□□□□□ -1.73
CLK4-207ENST00000520909 NFS1Q9Y697 457 aa4.21□□□□□ -1.73
CLK4-207ENST00000520909 DDX49Q9Y6V7 483 aaKnown RBP4.21□□□□□ -1.73
CLK4-207ENST00000520909 MYH8P13535 1937 aa4.21□□□□□ -1.74
CLK4-207ENST00000520909 GREB1LQ9C091 1923 aaPredicted RBP4.21□□□□□ -1.74
CLK4-207ENST00000520909 WDR90Q96KV7 1748 aa4.21□□□□□ -1.74
CLK4-207ENST00000520909 SCN4AP35499 1836 aa4.21□□□□□ -1.74
CLK4-207ENST00000520909 MYH4Q9Y623 1939 aa4.21□□□□□ -1.74
CLK4-207ENST00000520909 A0A0U1RQJ8 604 aa4.21□□□□□ -1.74
CLK4-207ENST00000520909 A0A1B0GVM2 712 aa4.21□□□□□ -1.74
CLK4-207ENST00000520909 YEATS4O95619 227 aa4.21□□□□□ -1.74
CLK4-207ENST00000520909 MBD3O95983 291 aa4.21□□□□□ -1.74
CLK4-207ENST00000520909 TRAPPC10P48553 1259 aa4.21□□□□□ -1.74
CLK4-207ENST00000520909 FKBP1BP68106 108 aa4.21□□□□□ -1.74
CLK4-207ENST00000520909 IRX3P78415 501 aaPredicted RBP4.21□□□□□ -1.74
CLK4-207ENST00000520909 DMP1Q13316 513 aaPredicted RBP4.21□□□□□ -1.74
CLK4-207ENST00000520909 PMS2P11Q13670 270 aa4.21□□□□□ -1.74
CLK4-207ENST00000520909 NONOQ15233 471 aaKnown RBP eCLIP4.21□□□□□ -1.74
CLK4-207ENST00000520909 CST9Q5W186 159 aa4.21□□□□□ -1.74
CLK4-207ENST00000520909 TYW3Q6IPR3 259 aaKnown RBP4.21□□□□□ -1.74
CLK4-207ENST00000520909 GDPD4Q6W3E5 623 aa4.21□□□□□ -1.74
CLK4-207ENST00000520909 FASTKD5Q7L8L6 764 aaKnown RBP4.21□□□□□ -1.74
CLK4-207ENST00000520909 CPXCR1Q8N123 301 aa4.21□□□□□ -1.74
CLK4-207ENST00000520909 ZNF114Q8NC26 417 aa4.21□□□□□ -1.74
CLK4-207ENST00000520909 LINC00301Q8NCQ3 95 aa4.21□□□□□ -1.74
CLK4-207ENST00000520909 NEK9Q8TD19 979 aa4.21□□□□□ -1.74
CLK4-207ENST00000520909 GPT2Q8TD30 523 aa4.21□□□□□ -1.74
CLK4-207ENST00000520909 KCNG4Q8TDN1 519 aa4.21□□□□□ -1.74
CLK4-207ENST00000520909 DUX3Q96PT4 197 aa4.21□□□□□ -1.74
CLK4-207ENST00000520909 TBCBQ99426 244 aa4.21□□□□□ -1.74
CLK4-207ENST00000520909 XRN2Q9H0D6 950 aaKnown RBP eCLIP4.21□□□□□ -1.74
CLK4-207ENST00000520909 SLC38A10Q9HBR0 1119 aa4.21□□□□□ -1.74
CLK4-207ENST00000520909 RAVER2Q9HCJ3 691 aaKnown RBP4.21□□□□□ -1.74
CLK4-207ENST00000520909 TM7SF3Q9NS93 570 aa4.21□□□□□ -1.74
CLK4-207ENST00000520909 TMEM248Q9NWD8 314 aa4.21□□□□□ -1.74
CLK4-207ENST00000520909 HOXC10Q9NYD6 342 aa4.21□□□□□ -1.74
CLK4-207ENST00000520909 CCPG1Q9ULG6 757 aa4.21□□□□□ -1.74
CLK4-207ENST00000520909 SLC45A1Q9Y2W3 748 aa4.21□□□□□ -1.74
CLK4-207ENST00000520909 MRPL11Q9Y3B7 192 aaKnown RBP4.21□□□□□ -1.74
CLK4-207ENST00000520909 ELP1O95163 1332 aa4.2□□□□□ -1.74
CLK4-207ENST00000520909 MBD3L5A6NJ08 208 aaPredicted RBP4.2□□□□□ -1.74
CLK4-207ENST00000520909 KDM4EB2RXH2 506 aaPredicted RBP4.2□□□□□ -1.74
CLK4-207ENST00000520909 MEIS2O14770 477 aa4.2□□□□□ -1.74
CLK4-207ENST00000520909 XPNPEP2O43895 674 aa4.2□□□□□ -1.74
CLK4-207ENST00000520909 CCNT1O60563 726 aaKnown RBP4.2□□□□□ -1.74
CLK4-207ENST00000520909 ICAM1P05362 532 aa4.2□□□□□ -1.74
CLK4-207ENST00000520909 POLR2MP0CAP2 368 aa4.2□□□□□ -1.74
CLK4-207ENST00000520909 CETPP11597 493 aa4.2□□□□□ -1.74
CLK4-207ENST00000520909 DGKAP23743 735 aa4.2□□□□□ -1.74
CLK4-207ENST00000520909 EEF1GP26641 437 aaKnown RBP4.2□□□□□ -1.74
CLK4-207ENST00000520909 HOXA13P31271 388 aaPredicted RBP4.2□□□□□ -1.74
CLK4-207ENST00000520909 AKT1P31749 480 aa4.2□□□□□ -1.74
CLK4-207ENST00000520909 CLCNKBP51801 687 aa4.2□□□□□ -1.74
CLK4-207ENST00000520909 HUNKP57058 714 aa4.2□□□□□ -1.74
CLK4-207ENST00000520909 RAB30Q15771 203 aa4.2□□□□□ -1.74
CLK4-207ENST00000520909 KLHL40Q2TBA0 621 aa4.2□□□□□ -1.74
CLK4-207ENST00000520909 LETM2Q2VYF4 491 aa4.2□□□□□ -1.74
CLK4-207ENST00000520909 XKR9Q5GH70 373 aa4.2□□□□□ -1.74
CLK4-207ENST00000520909 SNRNP48Q6IEG0 339 aaKnown RBP4.2□□□□□ -1.74
CLK4-207ENST00000520909 CAVIN1Q6NZI2 390 aaKnown RBP4.2□□□□□ -1.74
CLK4-207ENST00000520909 RHBDF2Q6PJF5 856 aa4.2□□□□□ -1.74
CLK4-207ENST00000520909 CCDC73Q6ZRK6 1079 aa4.2□□□□□ -1.74
CLK4-207ENST00000520909 TRMT1LQ7Z2T5 733 aaKnown RBP4.2□□□□□ -1.74
CLK4-207ENST00000520909 SERPINA11Q86U17 422 aa4.2□□□□□ -1.74
CLK4-207ENST00000520909 CCAR1Q8IX12 1150 aaKnown RBP4.2□□□□□ -1.74
CLK4-207ENST00000520909 MAB21L3Q8N8X9 362 aa4.2□□□□□ -1.74
CLK4-207ENST00000520909 FSIP1Q8NA03 581 aa4.2□□□□□ -1.74
CLK4-207ENST00000520909 DBF4BQ8NFT6 615 aa4.2□□□□□ -1.74
CLK4-207ENST00000520909 TBCKQ8TEA7 893 aa4.2□□□□□ -1.74
CLK4-207ENST00000520909 HDAC7Q8WUI4 952 aa4.2□□□□□ -1.74
CLK4-207ENST00000520909 FBXO17Q96EF6 278 aa4.2□□□□□ -1.74
CLK4-207ENST00000520909 NPAS1Q99742 590 aa4.2□□□□□ -1.74
CLK4-207ENST00000520909 PAGR1Q9BTK6 254 aa4.2□□□□□ -1.74
CLK4-207ENST00000520909 MECRQ9BV79 373 aa4.2□□□□□ -1.74
CLK4-207ENST00000520909 IFT27Q9BW83 186 aa4.2□□□□□ -1.74
CLK4-207ENST00000520909 C1QTNF5Q9BXJ0 243 aa4.2□□□□□ -1.74
CLK4-207ENST00000520909 PNMA2Q9UL42 364 aa4.2□□□□□ -1.74
CLK4-207ENST00000520909 AGTPBP1Q9UPW5 1226 aa4.2□□□□□ -1.74
CLK4-207ENST00000520909 GAB2Q9UQC2 676 aa4.2□□□□□ -1.74
CLK4-207ENST00000520909 ABCB11O95342 1321 aa4.19□□□□□ -1.74
CLK4-207ENST00000520909 MYH6P13533 1939 aa4.19□□□□□ -1.74
CLK4-207ENST00000520909 CCL15-CCL14A0A0B4J2E2 113 aa4.19□□□□□ -1.74
CLK4-207ENST00000520909 A0A1B0GVL5 298 aa4.19□□□□□ -1.74
CLK4-207ENST00000520909 FGF18O76093 207 aa4.19□□□□□ -1.74
CLK4-207ENST00000520909 CLDN7O95471 211 aa4.19□□□□□ -1.74
CLK4-207ENST00000520909 FCGR2AP12318 317 aa4.19□□□□□ -1.74
CLK4-207ENST00000520909 PRPH2P23942 346 aa4.19□□□□□ -1.74
CLK4-207ENST00000520909 CMA1P23946 247 aa4.19□□□□□ -1.74
CLK4-207ENST00000520909 GSTM2P28161 218 aa4.19□□□□□ -1.74
CLK4-207ENST00000520909 ERVK11-1P61568 191 aa4.19□□□□□ -1.74
CLK4-207ENST00000520909 SF3A3Q12874 501 aaKnown RBP eCLIP4.19□□□□□ -1.74
CLK4-207ENST00000520909 CTTNQ14247 550 aaKnown RBP4.19□□□□□ -1.74
CLK4-207ENST00000520909 RBBP5Q15291 538 aaKnown RBP4.19□□□□□ -1.74
CLK4-207ENST00000520909 CALCRLQ16602 461 aa4.19□□□□□ -1.74
CLK4-207ENST00000520909 CCL15Q16663 113 aa4.19□□□□□ -1.74
CLK4-207ENST00000520909 SYTL3Q4VX76 610 aa4.19□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms