RNA–Protein interactions for RNA: ENST00000520889.1

IGHV4-55-201, Transcript of immunoglobulin heavy variable 4-55 (pseudogene), humanhuman

BASIC

Gene IGHV4-55, Length 368 nt, Biotype IG V pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IGHV4-55-201ENST00000520889 MSS51Q4VC12 460 aa6.32□□□□□ -1.4
IGHV4-55-201ENST00000520889 LDLRAP1Q5SW96 308 aa6.32□□□□□ -1.4
IGHV4-55-201ENST00000520889 TEX35Q5T0J7 233 aa6.32□□□□□ -1.4
IGHV4-55-201ENST00000520889 RNF187Q5TA31 235 aaPredicted RBP6.32□□□□□ -1.4
IGHV4-55-201ENST00000520889 RAET1GQ6H3X3 334 aa6.32□□□□□ -1.4
IGHV4-55-201ENST00000520889 PACS1Q6VY07 963 aa6.32□□□□□ -1.4
IGHV4-55-201ENST00000520889 MACC1Q6ZN28 852 aa6.32□□□□□ -1.4
IGHV4-55-201ENST00000520889 PRR23BQ6ZRT6 265 aa6.32□□□□□ -1.4
IGHV4-55-201ENST00000520889 KIAA0408Q6ZU52 694 aa6.32□□□□□ -1.4
IGHV4-55-201ENST00000520889 LRRC6Q86X45 466 aa6.32□□□□□ -1.4
IGHV4-55-201ENST00000520889 PHYKPLQ8IUZ5 450 aa6.32□□□□□ -1.4
IGHV4-55-201ENST00000520889 CNTN4Q8IWV2 1026 aa6.32□□□□□ -1.4
IGHV4-55-201ENST00000520889 ZBED8Q8IZ13 594 aa6.32□□□□□ -1.4
IGHV4-55-201ENST00000520889 AGGF1Q8N302 714 aaeCLIP6.32□□□□□ -1.4
IGHV4-55-201ENST00000520889 SERBP1Q8NC51 408 aaKnown RBP eCLIP6.32□□□□□ -1.4
IGHV4-55-201ENST00000520889 DDHD1Q8NEL9 900 aa6.32□□□□□ -1.4
IGHV4-55-201ENST00000520889 OR13C4Q8NGS5 318 aa6.32□□□□□ -1.4
IGHV4-55-201ENST00000520889 OR4L1Q8NH43 312 aa6.32□□□□□ -1.4
IGHV4-55-201ENST00000520889 PYROXD1Q8WU10 500 aa6.32□□□□□ -1.4
IGHV4-55-201ENST00000520889 SCAMP4Q969E2 229 aa6.32□□□□□ -1.4
IGHV4-55-201ENST00000520889 GLYATL1Q969I3 302 aa6.32□□□□□ -1.4
IGHV4-55-201ENST00000520889 MFSD3Q96ES6 412 aa6.32□□□□□ -1.4
IGHV4-55-201ENST00000520889 DNAJC1Q96KC8 554 aaKnown RBP6.32□□□□□ -1.4
IGHV4-55-201ENST00000520889 WDR92Q96MX6 357 aa6.32□□□□□ -1.4
IGHV4-55-201ENST00000520889 FMO2Q99518 471 aa6.32□□□□□ -1.4
IGHV4-55-201ENST00000520889 FAM167BQ9BTA0 163 aa6.32□□□□□ -1.4
IGHV4-55-201ENST00000520889 APOOQ9BUR5 198 aa6.32□□□□□ -1.4
IGHV4-55-201ENST00000520889 ASB8Q9H765 288 aa6.32□□□□□ -1.4
IGHV4-55-201ENST00000520889 WDR26Q9H7D7 661 aa6.32□□□□□ -1.4
IGHV4-55-201ENST00000520889 ANKZF1Q9H8Y5 726 aa6.32□□□□□ -1.4
IGHV4-55-201ENST00000520889 CAPN10Q9HC96 672 aa6.32□□□□□ -1.4
IGHV4-55-201ENST00000520889 TRIM39Q9HCM9 518 aa6.32□□□□□ -1.4
IGHV4-55-201ENST00000520889 MBNL1Q9NR56 388 aaKnown RBP6.32□□□□□ -1.4
IGHV4-55-201ENST00000520889 NSMCE4AQ9NXX6 385 aa6.32□□□□□ -1.4
IGHV4-55-201ENST00000520889 MOCS1Q9NZB8 636 aa6.32□□□□□ -1.4
IGHV4-55-201ENST00000520889 ZC3H7BQ9UGR2 993 aaKnown RBP6.32□□□□□ -1.4
IGHV4-55-201ENST00000520889 FKBPLQ9UIM3 349 aa6.32□□□□□ -1.4
IGHV4-55-201ENST00000520889 RAB21Q9UL25 225 aa6.32□□□□□ -1.4
IGHV4-55-201ENST00000520889 CNOT6Q9ULM6 557 aaKnown RBP6.32□□□□□ -1.4
IGHV4-55-201ENST00000520889 GPR34Q9UPC5 381 aa6.32□□□□□ -1.4
IGHV4-55-201ENST00000520889 INVSQ9Y283 1065 aa6.32□□□□□ -1.4
IGHV4-55-201ENST00000520889 SLC17A4Q9Y2C5 497 aa6.32□□□□□ -1.4
IGHV4-55-201ENST00000520889 COQ6Q9Y2Z9 468 aa6.32□□□□□ -1.4
IGHV4-55-201ENST00000520889 SLC30A1Q9Y6M5 507 aa6.32□□□□□ -1.4
IGHV4-55-201ENST00000520889 RPS6KL1Q9Y6S9 549 aa6.32□□□□□ -1.4
IGHV4-55-201ENST00000520889 DGKBQ9Y6T7 804 aa6.32□□□□□ -1.4
IGHV4-55-201ENST00000520889 R4GN57 208 aa6.32□□□□□ -1.4
IGHV4-55-201ENST00000520889 OTOGLQ3ZCN5 2332 aa6.32□□□□□ -1.4
IGHV4-55-201ENST00000520889 SDK1Q7Z5N4 2213 aa6.31□□□□□ -1.4
IGHV4-55-201ENST00000520889 ESYT3A0FGR9 886 aa6.31□□□□□ -1.4
IGHV4-55-201ENST00000520889 PRR23AA6NEV1 266 aa6.31□□□□□ -1.4
IGHV4-55-201ENST00000520889 POM121BA6NF01 834 aa6.31□□□□□ -1.4
IGHV4-55-201ENST00000520889 FADS2P1A8MWK0 482 aa6.31□□□□□ -1.4
IGHV4-55-201ENST00000520889 CFAP99D6REC4 459 aa6.31□□□□□ -1.4
IGHV4-55-201ENST00000520889 KHNYNO15037 678 aaKnown RBP6.31□□□□□ -1.4
IGHV4-55-201ENST00000520889 CHUKO15111 745 aa6.31□□□□□ -1.4
IGHV4-55-201ENST00000520889 CD3EAPO15446 510 aaKnown RBP6.31□□□□□ -1.4
IGHV4-55-201ENST00000520889 NUAK1O60285 661 aa6.31□□□□□ -1.4
IGHV4-55-201ENST00000520889 AP2A2O94973 939 aa6.31□□□□□ -1.4
IGHV4-55-201ENST00000520889 SLC25A14O95258 325 aaPredicted RBP6.31□□□□□ -1.4
IGHV4-55-201ENST00000520889 IVLP07476 585 aa6.31□□□□□ -1.4
IGHV4-55-201ENST00000520889 RHOXF2BP0C7M4 288 aa6.31□□□□□ -1.4
IGHV4-55-201ENST00000520889 THEGLP0DJG4 465 aa6.31□□□□□ -1.4
IGHV4-55-201ENST00000520889 RALBP11234 206 aa6.31□□□□□ -1.4
IGHV4-55-201ENST00000520889 CD9P21926 228 aa6.31□□□□□ -1.4
IGHV4-55-201ENST00000520889 RPS3P23396 243 aaKnown RBP eCLIP6.31□□□□□ -1.4
IGHV4-55-201ENST00000520889 ACRV1P26436 265 aa6.31□□□□□ -1.4
IGHV4-55-201ENST00000520889 NMBRP28336 390 aa6.31□□□□□ -1.4
IGHV4-55-201ENST00000520889 MC4RP32245 332 aa6.31□□□□□ -1.4
IGHV4-55-201ENST00000520889 PHBP35232 272 aa6.31□□□□□ -1.4
IGHV4-55-201ENST00000520889 MPLP40238 635 aa6.31□□□□□ -1.4
IGHV4-55-201ENST00000520889 NSG1P42857 185 aa6.31□□□□□ -1.4
IGHV4-55-201ENST00000520889 CTSKP43235 329 aa6.31□□□□□ -1.4
IGHV4-55-201ENST00000520889 MAGEA4P43358 317 aa6.31□□□□□ -1.4
IGHV4-55-201ENST00000520889 ARRB1P49407 418 aaPredicted RBP6.31□□□□□ -1.4
IGHV4-55-201ENST00000520889 CARSP49589 748 aaKnown RBP6.31□□□□□ -1.4
IGHV4-55-201ENST00000520889 CLCNKAP51800 687 aa6.31□□□□□ -1.4
IGHV4-55-201ENST00000520889 THOP1P52888 689 aa6.31□□□□□ -1.4
IGHV4-55-201ENST00000520889 C21orf59P57076 290 aa6.31□□□□□ -1.4
IGHV4-55-201ENST00000520889 SEMG2Q02383 582 aa6.31□□□□□ -1.4
IGHV4-55-201ENST00000520889 NAB1Q13506 487 aa6.31□□□□□ -1.4
IGHV4-55-201ENST00000520889 LRP8Q14114 963 aa6.31□□□□□ -1.4
IGHV4-55-201ENST00000520889 PDE1CQ14123 709 aaPredicted RBP6.31□□□□□ -1.4
IGHV4-55-201ENST00000520889 SEPT6Q14141 434 aa6.31□□□□□ -1.4
IGHV4-55-201ENST00000520889 HLTFQ14527 1009 aaKnown RBP eCLIP6.31□□□□□ -1.4
IGHV4-55-201ENST00000520889 CRYMQ14894 314 aa6.31□□□□□ -1.4
IGHV4-55-201ENST00000520889 PTPRRQ15256 657 aa6.31□□□□□ -1.4
IGHV4-55-201ENST00000520889 TRADDQ15628 312 aa6.31□□□□□ -1.4
IGHV4-55-201ENST00000520889 CHRNA6Q15825 494 aa6.31□□□□□ -1.4
IGHV4-55-201ENST00000520889 CSRP2Q16527 193 aa6.31□□□□□ -1.4
IGHV4-55-201ENST00000520889 ZNF423Q2M1K9 1284 aa6.31□□□□□ -1.4
IGHV4-55-201ENST00000520889 TYSND1Q2T9J0 566 aa6.31□□□□□ -1.4
IGHV4-55-201ENST00000520889 ATP13A5Q4VNC0 1218 aa6.31□□□□□ -1.4
IGHV4-55-201ENST00000520889 FASTKD1Q53R41 847 aaKnown RBP6.31□□□□□ -1.4
IGHV4-55-201ENST00000520889 DENND2CQ68D51 928 aa6.31□□□□□ -1.4
IGHV4-55-201ENST00000520889 MRNIPQ6NTE8 343 aa6.31□□□□□ -1.4
IGHV4-55-201ENST00000520889 CASC4Q6P4E1 433 aa6.31□□□□□ -1.4
IGHV4-55-201ENST00000520889 EMBQ6PCB8 327 aa6.31□□□□□ -1.4
IGHV4-55-201ENST00000520889 CCNI2Q6ZMN8 369 aaPredicted RBP6.31□□□□□ -1.4
IGHV4-55-201ENST00000520889 UNC5AQ6ZN44 842 aa6.31□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms