RNA–Protein interactions for RNA: ENST00000520687.1

SPARC-202, Transcript of secreted protein acidic and cysteine rich, humanhuman

TSL 2

Gene SPARC, Length 1,598 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPARC-202ENST00000520687 ABCB8Q9NUT2 735 aa9.91□□□□□ -0.82
SPARC-202ENST00000520687 TMEM45AQ9NWC5 275 aa9.91□□□□□ -0.82
SPARC-202ENST00000520687 GTSE1Q9NYZ3 720 aa9.91□□□□□ -0.82
SPARC-202ENST00000520687 KLHL42Q9P2K6 505 aa9.91□□□□□ -0.82
SPARC-202ENST00000520687 SLC7A8Q9UHI5 535 aa9.91□□□□□ -0.82
SPARC-202ENST00000520687 VPS51Q9UID3 782 aa9.91□□□□□ -0.82
SPARC-202ENST00000520687 APPL1Q9UKG1 709 aa9.91□□□□□ -0.82
SPARC-202ENST00000520687 TRAF6Q9Y4K3 522 aa9.91□□□□□ -0.82
SPARC-202ENST00000520687 SLC30A1Q9Y6M5 507 aa9.91□□□□□ -0.82
SPARC-202ENST00000520687 ZFHX2Q9C0A1 2572 aaPredicted RBP9.9□□□□□ -0.82
SPARC-202ENST00000520687 PTPRSQ13332 1948 aa9.9□□□□□ -0.82
SPARC-202ENST00000520687 C5orf42Q9H799 3197 aa9.9□□□□□ -0.82
SPARC-202ENST00000520687 OR51F1A6NGY5 319 aa9.9□□□□□ -0.82
SPARC-202ENST00000520687 HTRA2O43464 458 aaPredicted RBP9.9□□□□□ -0.82
SPARC-202ENST00000520687 ZBTB14O43829 449 aa9.9□□□□□ -0.82
SPARC-202ENST00000520687 KLK8O60259 260 aa9.9□□□□□ -0.82
SPARC-202ENST00000520687 GPC4O75487 556 aa9.9□□□□□ -0.82
SPARC-202ENST00000520687 CXCL14O95715 111 aa9.9□□□□□ -0.82
SPARC-202ENST00000520687 IGSF6O95976 241 aa9.9□□□□□ -0.82
SPARC-202ENST00000520687 F7P08709 466 aaPredicted RBP9.9□□□□□ -0.82
SPARC-202ENST00000520687 CSF2RAP15509 400 aa9.9□□□□□ -0.82
SPARC-202ENST00000520687 RPS3P23396 243 aaKnown RBP eCLIP9.9□□□□□ -0.822e-6■■■■□ 20.7
SPARC-202ENST00000520687 GABRR2P28476 465 aa9.9□□□□□ -0.82
SPARC-202ENST00000520687 ACADVLP49748 655 aa9.9□□□□□ -0.82
SPARC-202ENST00000520687 IL2P60568 153 aa9.9□□□□□ -0.82
SPARC-202ENST00000520687 DEFB103AP81534 67 aa9.9□□□□□ -0.82
SPARC-202ENST00000520687 HTRA4P83105 476 aaPredicted RBP9.9□□□□□ -0.82
SPARC-202ENST00000520687 BCL2L1Q07817 233 aa9.9□□□□□ -0.82
SPARC-202ENST00000520687 TRAF2Q12933 501 aa9.9□□□□□ -0.82
SPARC-202ENST00000520687 CUL3Q13618 768 aa9.9□□□□□ -0.82
SPARC-202ENST00000520687 DMC1Q14565 340 aa9.9□□□□□ -0.82
SPARC-202ENST00000520687 RCN1Q15293 331 aa9.9□□□□□ -0.82
SPARC-202ENST00000520687 PTPRNQ16849 979 aa9.9□□□□□ -0.82
SPARC-202ENST00000520687 LEXMQ3ZCV2 418 aa9.9□□□□□ -0.82
SPARC-202ENST00000520687 GPR33Q49SQ1 333 aa9.9□□□□□ -0.82
SPARC-202ENST00000520687 ZDHHC20Q5W0Z9 365 aa9.9□□□□□ -0.82
SPARC-202ENST00000520687 NXNQ6DKJ4 435 aa9.9□□□□□ -0.82
SPARC-202ENST00000520687 TMEM207Q6UWW9 146 aa9.9□□□□□ -0.82
SPARC-202ENST00000520687 RIPOR1Q6ZS17 1223 aa9.9□□□□□ -0.82
SPARC-202ENST00000520687 PELI3Q8N2H9 469 aa9.9□□□□□ -0.82
SPARC-202ENST00000520687 PHTF2Q8N3S3 785 aa9.9□□□□□ -0.82
SPARC-202ENST00000520687 MDGA1Q8NFP4 955 aa9.9□□□□□ -0.82
SPARC-202ENST00000520687 DDI1Q8WTU0 396 aa9.9□□□□□ -0.82
SPARC-202ENST00000520687 CLP1Q92989 425 aaKnown RBP9.9□□□□□ -0.82
SPARC-202ENST00000520687 SGF29Q96ES7 293 aa9.9□□□□□ -0.82
SPARC-202ENST00000520687 MYO19Q96H55 970 aa9.9□□□□□ -0.82
SPARC-202ENST00000520687 ZNF570Q96NI8 536 aa9.9□□□□□ -0.82
SPARC-202ENST00000520687 ATOH8Q96SQ7 321 aa9.9□□□□□ -0.82
SPARC-202ENST00000520687 LRRC3Q9BY71 257 aa9.9□□□□□ -0.82
SPARC-202ENST00000520687 GPR63Q9BZJ6 419 aa9.9□□□□□ -0.82
SPARC-202ENST00000520687 WDR55Q9H6Y2 383 aaPredicted RBP9.9□□□□□ -0.82
SPARC-202ENST00000520687 ATP13A3Q9H7F0 1226 aa9.9□□□□□ -0.82
SPARC-202ENST00000520687 SMPD4Q9NXE4 827 aa9.9□□□□□ -0.82
SPARC-202ENST00000520687 IL17CQ9P0M4 197 aa9.9□□□□□ -0.82
SPARC-202ENST00000520687 NKX1-2Q9UD57 310 aaPredicted RBP9.9□□□□□ -0.82
SPARC-202ENST00000520687 TRMT6Q9UJA5 497 aaKnown RBP9.9□□□□□ -0.82
SPARC-202ENST00000520687 INSL6Q9Y581 213 aa9.9□□□□□ -0.82
SPARC-202ENST00000520687 PCDHGC4Q9Y5F7 938 aa9.9□□□□□ -0.82
SPARC-202ENST00000520687 SEC23IPQ9Y6Y8 1000 aaKnown RBP9.9□□□□□ -0.82
SPARC-202ENST00000520687 CHD7Q9P2D1 2997 aa9.9□□□□□ -0.82
SPARC-202ENST00000520687 CHD5Q8TDI0 1954 aa9.9□□□□□ -0.82
SPARC-202ENST00000520687 UBA6A0AVT1 1052 aaPredicted RBP9.89□□□□□ -0.83
SPARC-202ENST00000520687 PROB1E7EW31 1015 aa9.89□□□□□ -0.83
SPARC-202ENST00000520687 TGM5O43548 720 aa9.89□□□□□ -0.83
SPARC-202ENST00000520687 SNAP91O60641 907 aa9.89□□□□□ -0.83
SPARC-202ENST00000520687 SUPT7LO94864 414 aa9.89□□□□□ -0.83
SPARC-202ENST00000520687 MLYCDO95822 493 aa9.89□□□□□ -0.83
SPARC-202ENST00000520687 SLC4A1P02730 911 aa9.89□□□□□ -0.83
SPARC-202ENST00000520687 CKMP06732 381 aa9.89□□□□□ -0.83
SPARC-202ENST00000520687 PDHA1P08559 390 aa9.89□□□□□ -0.83
SPARC-202ENST00000520687 CNPP09543 421 aaKnown RBP9.89□□□□□ -0.83
SPARC-202ENST00000520687 ZNF7P17097 686 aaPredicted RBP9.89□□□□□ -0.83
SPARC-202ENST00000520687 ITGAXP20702 1163 aa9.89□□□□□ -0.83
SPARC-202ENST00000520687 MZF1P28698 734 aaPredicted RBP9.89□□□□□ -0.83
SPARC-202ENST00000520687 EPHA3P29320 983 aa9.89□□□□□ -0.83
SPARC-202ENST00000520687 FMO4P31512 558 aa9.89□□□□□ -0.83
SPARC-202ENST00000520687 MC4RP32245 332 aa9.89□□□□□ -0.83
SPARC-202ENST00000520687 CSKP41240 450 aa9.89□□□□□ -0.83
SPARC-202ENST00000520687 ABL2P42684 1182 aa9.89□□□□□ -0.83
SPARC-202ENST00000520687 PTDSS1P48651 473 aaKnown RBP9.89□□□□□ -0.83
SPARC-202ENST00000520687 MTTPP55157 894 aa9.89□□□□□ -0.83
SPARC-202ENST00000520687 TIAL1Q01085 375 aaKnown RBP eCLIP9.89□□□□□ -0.83
SPARC-202ENST00000520687 GRIK2Q13002 908 aa9.89□□□□□ -0.83
SPARC-202ENST00000520687 ART3Q13508 389 aa9.89□□□□□ -0.83
SPARC-202ENST00000520687 SEMA3AQ14563 771 aa9.89□□□□□ -0.83
SPARC-202ENST00000520687 UNC50Q53HI1 259 aa9.89□□□□□ -0.83
SPARC-202ENST00000520687 ANKS6Q68DC2 871 aa9.89□□□□□ -0.83
SPARC-202ENST00000520687 TXNDC8Q6A555 127 aa9.89□□□□□ -0.83
SPARC-202ENST00000520687 METTL2BQ6P1Q9 378 aaKnown RBP9.89□□□□□ -0.83
SPARC-202ENST00000520687 BMP8AQ7Z5Y6 402 aa9.89□□□□□ -0.83
SPARC-202ENST00000520687 LDB1Q86U70 411 aaPredicted RBP9.89□□□□□ -0.83
SPARC-202ENST00000520687 TMC8Q8IU68 726 aa9.89□□□□□ -0.83
SPARC-202ENST00000520687 PLPP6Q8IY26 295 aa9.89□□□□□ -0.83
SPARC-202ENST00000520687 PGAM4Q8N0Y7 254 aa9.89□□□□□ -0.83
SPARC-202ENST00000520687 SPATA6LQ8N4H0 392 aa9.89□□□□□ -0.83
SPARC-202ENST00000520687 EFHBQ8N7U6 833 aa9.89□□□□□ -0.83
SPARC-202ENST00000520687 GRIN3AQ8TCU5 1115 aa9.89□□□□□ -0.83
SPARC-202ENST00000520687 WDR60Q8WVS4 1066 aa9.89□□□□□ -0.83
SPARC-202ENST00000520687 LYSMD1Q96S90 227 aa9.89□□□□□ -0.83
SPARC-202ENST00000520687 NUSAP1Q9BXS6 441 aaKnown RBP9.89□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms