RNA–Protein interactions for RNA: ENST00000517545.5

PCM1-203, Transcript of pericentriolar material 1, humanhuman

TSL 1 (best)

Gene PCM1, Length 3,440 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCM1-203ENST00000517545 SCIMPQ6UWF3 145 aa12.32□□□□□ -0.44
PCM1-203ENST00000517545 KIAA0408Q6ZU52 694 aa12.32□□□□□ -0.44
PCM1-203ENST00000517545 LIMS2Q7Z4I7 341 aa12.32□□□□□ -0.44
PCM1-203ENST00000517545 TAC4Q86UU9 113 aa12.32□□□□□ -0.44
PCM1-203ENST00000517545 RALGPS2Q86X27 583 aaPredicted RBP12.32□□□□□ -0.44
PCM1-203ENST00000517545 PTRH1Q86Y79 214 aaKnown RBP12.32□□□□□ -0.44
PCM1-203ENST00000517545 CILP2Q8IUL8 1156 aa12.32□□□□□ -0.44
PCM1-203ENST00000517545 OR13J1Q8NGT2 312 aa12.32□□□□□ -0.44
PCM1-203ENST00000517545 OR6P1Q8NGX9 317 aa12.32□□□□□ -0.44
PCM1-203ENST00000517545 IL12RB2Q99665 862 aa12.32□□□□□ -0.44
PCM1-203ENST00000517545 C16orf70Q9BSU1 422 aa12.32□□□□□ -0.44
PCM1-203ENST00000517545 SLC39A8Q9C0K1 460 aa12.32□□□□□ -0.44
PCM1-203ENST00000517545 ENTPD7Q9NQZ7 604 aa12.32□□□□□ -0.44
PCM1-203ENST00000517545 C8orf4Q9NR00 106 aa12.32□□□□□ -0.44
PCM1-203ENST00000517545 NEU3Q9UQ49 428 aa12.32□□□□□ -0.44
PCM1-203ENST00000517545 TIMM13Q9Y5L4 95 aaPredicted RBP12.32□□□□□ -0.44
PCM1-203ENST00000517545 ZSWIM8A7E2V4 1837 aa12.31□□□□□ -0.44
PCM1-203ENST00000517545 H0YAE9 185 aa12.31□□□□□ -0.44
PCM1-203ENST00000517545 KPNA4O00629 521 aaPredicted RBP12.31□□□□□ -0.44
PCM1-203ENST00000517545 MATN4O95460 622 aa12.31□□□□□ -0.44
PCM1-203ENST00000517545 MYL3P08590 195 aa12.31□□□□□ -0.44
PCM1-203ENST00000517545 CCNCP24863 283 aa12.31□□□□□ -0.44
PCM1-203ENST00000517545 HTR1BP28222 390 aa12.31□□□□□ -0.44
PCM1-203ENST00000517545 CXCR3P49682 368 aa12.31□□□□□ -0.44
PCM1-203ENST00000517545 CCNA1P78396 465 aa12.31□□□□□ -0.44
PCM1-203ENST00000517545 OR4D1Q15615 310 aa12.31□□□□□ -0.44
PCM1-203ENST00000517545 GRIK4Q16099 956 aa12.31□□□□□ -0.44
PCM1-203ENST00000517545 CCDC92Q53HC0 331 aaPredicted RBP12.31□□□□□ -0.44
PCM1-203ENST00000517545 CRTC3Q6UUV7 619 aa12.31□□□□□ -0.44
PCM1-203ENST00000517545 SLC16A12Q6ZSM3 486 aa12.31□□□□□ -0.44
PCM1-203ENST00000517545 NLGN2Q8NFZ4 835 aa12.31□□□□□ -0.44
PCM1-203ENST00000517545 PTCD2Q8WV60 388 aaKnown RBP12.31□□□□□ -0.44
PCM1-203ENST00000517545 ZNF347Q96SE7 839 aa12.31□□□□□ -0.44
PCM1-203ENST00000517545 HERC2P3Q9BVR0 1158 aa12.31□□□□□ -0.44
PCM1-203ENST00000517545 TRIM54Q9BYV2 358 aa12.31□□□□□ -0.44
PCM1-203ENST00000517545 GIN1Q9NXP7 522 aa12.31□□□□□ -0.44
PCM1-203ENST00000517545 SEPT3Q9UH03 358 aa12.31□□□□□ -0.44
PCM1-203ENST00000517545 GPR45Q9Y5Y3 372 aa12.31□□□□□ -0.44
PCM1-203ENST00000517545 DNAJC25-GNG10A0A024R161 153 aa12.31□□□□□ -0.44
PCM1-203ENST00000517545 A0A1W2PP18 115 aa12.31□□□□□ -0.44
PCM1-203ENST00000517545 MAN1A2O60476 641 aa12.31□□□□□ -0.44
PCM1-203ENST00000517545 CNOT3O75175 753 aaKnown RBP12.31□□□□□ -0.44
PCM1-203ENST00000517545 WISP3O95389 354 aaPredicted RBP12.31□□□□□ -0.44
PCM1-203ENST00000517545 C1RP00736 705 aa12.31□□□□□ -0.44
PCM1-203ENST00000517545 CD4P01730 458 aa12.31□□□□□ -0.44
PCM1-203ENST00000517545 ZFP36L2P47974 494 aaKnown RBP12.31□□□□□ -0.44
PCM1-203ENST00000517545 WNT3AP56704 352 aa12.31□□□□□ -0.44
PCM1-203ENST00000517545 UFM1P61960 85 aa12.31□□□□□ -0.44
PCM1-203ENST00000517545 KCTD2Q14681 263 aa12.31□□□□□ -0.44
PCM1-203ENST00000517545 DPY19L1Q2PZI1 675 aa12.31□□□□□ -0.44
PCM1-203ENST00000517545 BHLHA9Q7RTU4 235 aa12.31□□□□□ -0.44
PCM1-203ENST00000517545 STK32CQ86UX6 486 aa12.31□□□□□ -0.44
PCM1-203ENST00000517545 CLEC4FQ8N1N0 589 aa12.31□□□□□ -0.44
PCM1-203ENST00000517545 TRPM4Q8TD43 1214 aa12.31□□□□□ -0.44
PCM1-203ENST00000517545 TMBIM1Q969X1 311 aa12.31□□□□□ -0.44
PCM1-203ENST00000517545 TSPAN17Q96FV3 270 aa12.31□□□□□ -0.44
PCM1-203ENST00000517545 MROQ9BYG7 248 aa12.31□□□□□ -0.44
PCM1-203ENST00000517545 ATAD3AQ9NVI7 634 aa12.31□□□□□ -0.44
PCM1-203ENST00000517545 TSC22D4Q9Y3Q8 395 aa12.31□□□□□ -0.44
PCM1-203ENST00000517545 KCTD3Q9Y597 815 aa12.31□□□□□ -0.44
PCM1-203ENST00000517545 PCDHGA8Q9Y5G5 932 aa12.31□□□□□ -0.44
PCM1-203ENST00000517545 GPC6Q9Y625 555 aaPredicted RBP12.31□□□□□ -0.44
PCM1-203ENST00000517545 MYBPHLA2RUH7 354 aa12.31□□□□□ -0.44
PCM1-203ENST00000517545 CLDN25C9JDP6 229 aa12.31□□□□□ -0.44
PCM1-203ENST00000517545 H3BRB1 525 aa12.31□□□□□ -0.44
PCM1-203ENST00000517545 JRKO75564 520 aa12.31□□□□□ -0.44
PCM1-203ENST00000517545 WARSP23381 471 aaKnown RBP12.31□□□□□ -0.44
PCM1-203ENST00000517545 DNASE1L3Q13609 305 aa12.31□□□□□ -0.44
PCM1-203ENST00000517545 MEP1AQ16819 746 aa12.31□□□□□ -0.44
PCM1-203ENST00000517545 TIGD2Q4W5G0 525 aa12.31□□□□□ -0.44
PCM1-203ENST00000517545 KANK2Q63ZY3 851 aa12.31□□□□□ -0.44
PCM1-203ENST00000517545 HS3ST5Q8IZT8 346 aa12.31□□□□□ -0.44
PCM1-203ENST00000517545 BPIFB1Q8TDL5 484 aa12.31□□□□□ -0.44
PCM1-203ENST00000517545 OSCP1Q8WVF1 389 aa12.31□□□□□ -0.44
PCM1-203ENST00000517545 PABPC5Q96DU9 382 aaKnown RBP12.31□□□□□ -0.44
PCM1-203ENST00000517545 NRBF2Q96F24 287 aa12.31□□□□□ -0.44
PCM1-203ENST00000517545 PGAP3Q96FM1 320 aaPredicted RBP12.31□□□□□ -0.44
PCM1-203ENST00000517545 BDH2Q9BUT1 245 aa12.31□□□□□ -0.44
PCM1-203ENST00000517545 GMIPQ9P107 970 aa12.31□□□□□ -0.44
PCM1-203ENST00000517545 DNMT3BQ9UBC3 853 aaKnown RBP12.31□□□□□ -0.44
PCM1-203ENST00000517545 OXSR1O95747 527 aaPredicted RBP12.3□□□□□ -0.44
PCM1-203ENST00000517545 ALPLP05186 524 aa12.3□□□□□ -0.44
PCM1-203ENST00000517545 MTHFD2P13995 350 aa12.3□□□□□ -0.44
PCM1-203ENST00000517545 AGXTP21549 392 aa12.3□□□□□ -0.44
PCM1-203ENST00000517545 RPS12P25398 132 aaKnown RBP12.3□□□□□ -0.44
PCM1-203ENST00000517545 CBX2Q14781 532 aaPredicted RBP12.3□□□□□ -0.44
PCM1-203ENST00000517545 PLA2G4EQ3MJ16 856 aa12.3□□□□□ -0.44
PCM1-203ENST00000517545 SV2CQ496J9 727 aa12.3□□□□□ -0.44
PCM1-203ENST00000517545 NOTUMQ6P988 496 aa12.3□□□□□ -0.44
PCM1-203ENST00000517545 NUDT8Q8WV74 236 aa12.3□□□□□ -0.44
PCM1-203ENST00000517545 HPS1Q92902 700 aa12.3□□□□□ -0.44
PCM1-203ENST00000517545 TOR3AQ9H497 397 aa12.3□□□□□ -0.44
PCM1-203ENST00000517545 SMURF2Q9HAU4 748 aa12.3□□□□□ -0.44
PCM1-203ENST00000517545 PIM2Q9P1W9 311 aa12.3□□□□□ -0.44
PCM1-203ENST00000517545 CENPFP49454 3210 aa12.3□□□□□ -0.44
PCM1-203ENST00000517545 MATN3O15232 486 aa12.3□□□□□ -0.44
PCM1-203ENST00000517545 E2F6O75461 281 aa12.3□□□□□ -0.44
PCM1-203ENST00000517545 S1PR4O95977 384 aa12.3□□□□□ -0.44
PCM1-203ENST00000517545 FGF4P08620 206 aa12.3□□□□□ -0.44
PCM1-203ENST00000517545 THRBP10828 461 aa12.3□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms