RNA–Protein interactions for RNA: ENST00000517256.1

SNORA40.17-201, Transcript of small nucleolar RNA, H/ACA box 40, humanhuman

BASIC

Gene SNORA40, Length 115 nt, Biotype snoRNA, Subcellular localisation Cytoplasm .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNORA40.17-201ENST00000517256 ARFIP2P53365 341 aa-0.22□□□□□ -2.44
SNORA40.17-201ENST00000517256 SLC12A3P55017 1021 aa-0.22□□□□□ -2.44
SNORA40.17-201ENST00000517256 MBTD1Q05BQ5 628 aa-0.22□□□□□ -2.44
SNORA40.17-201ENST00000517256 FAM27E3Q08E93 113 aa-0.22□□□□□ -2.44
SNORA40.17-201ENST00000517256 ACVR2BQ13705 512 aa-0.22□□□□□ -2.44
SNORA40.17-201ENST00000517256 ZNF234Q14588 700 aa-0.22□□□□□ -2.44
SNORA40.17-201ENST00000517256 PTPROQ16827 1216 aa-0.22□□□□□ -2.44
SNORA40.17-201ENST00000517256 Q1RN00 199 aa-0.22□□□□□ -2.44
SNORA40.17-201ENST00000517256 COL28A1Q2UY09 1125 aa-0.22□□□□□ -2.44
SNORA40.17-201ENST00000517256 Q5W150 140 aa-0.22□□□□□ -2.44
SNORA40.17-201ENST00000517256 RAD9BQ6WBX8 426 aa-0.22□□□□□ -2.44
SNORA40.17-201ENST00000517256 B3GNT6Q6ZMB0 384 aa-0.22□□□□□ -2.44
SNORA40.17-201ENST00000517256 TMTC3Q6ZXV5 915 aa-0.22□□□□□ -2.44
SNORA40.17-201ENST00000517256 ZSCAN2Q7Z7L9 614 aaPredicted RBP-0.22□□□□□ -2.44
SNORA40.17-201ENST00000517256 LONP2Q86WA8 852 aa-0.22□□□□□ -2.44
SNORA40.17-201ENST00000517256 AMIGO1Q86WK6 493 aa-0.22□□□□□ -2.44
SNORA40.17-201ENST00000517256 ZNF34Q8IZ26 560 aa-0.22□□□□□ -2.44
SNORA40.17-201ENST00000517256 C1orf87Q8N0U7 546 aa-0.22□□□□□ -2.44
SNORA40.17-201ENST00000517256 ZNF786Q8N393 782 aa-0.22□□□□□ -2.44
SNORA40.17-201ENST00000517256 ZNF491Q8N8L2 437 aa-0.22□□□□□ -2.44
SNORA40.17-201ENST00000517256 TMEM116Q8NCL8 245 aa-0.22□□□□□ -2.44
SNORA40.17-201ENST00000517256 KBTBD8Q8NFY9 601 aa-0.22□□□□□ -2.44
SNORA40.17-201ENST00000517256 LINC01006Q8NI28 216 aa-0.22□□□□□ -2.44
SNORA40.17-201ENST00000517256 PCNPQ8WW12 178 aaKnown RBP-0.22□□□□□ -2.44
SNORA40.17-201ENST00000517256 HDAC11Q96DB2 347 aa-0.22□□□□□ -2.44
SNORA40.17-201ENST00000517256 CDK5RAP3Q96JB5 506 aa-0.22□□□□□ -2.44
SNORA40.17-201ENST00000517256 WDFY2Q96P53 400 aa-0.22□□□□□ -2.44
SNORA40.17-201ENST00000517256 GMLQ99445 158 aa-0.22□□□□□ -2.44
SNORA40.17-201ENST00000517256 PCYT2Q99447 389 aa-0.22□□□□□ -2.44
SNORA40.17-201ENST00000517256 APOL2Q9BQE5 337 aa-0.22□□□□□ -2.44
SNORA40.17-201ENST00000517256 GPR88Q9GZN0 384 aa-0.22□□□□□ -2.44
SNORA40.17-201ENST00000517256 SLC12A5Q9H2X9 1139 aa-0.22□□□□□ -2.44
SNORA40.17-201ENST00000517256 TUBB1Q9H4B7 451 aa-0.22□□□□□ -2.44
SNORA40.17-201ENST00000517256 KRT84Q9NSB2 600 aa-0.22□□□□□ -2.44
SNORA40.17-201ENST00000517256 CUTCQ9NTM9 273 aa-0.22□□□□□ -2.44
SNORA40.17-201ENST00000517256 TYW1Q9NV66 732 aaKnown RBP-0.22□□□□□ -2.44
SNORA40.17-201ENST00000517256 TMEM30AQ9NV96 361 aa-0.22□□□□□ -2.44
SNORA40.17-201ENST00000517256 TMOD4Q9NZQ9 345 aa-0.22□□□□□ -2.44
SNORA40.17-201ENST00000517256 KLHL9Q9P2J3 617 aa-0.22□□□□□ -2.44
SNORA40.17-201ENST00000517256 ZNF69Q9UC07 566 aa-0.22□□□□□ -2.44
SNORA40.17-201ENST00000517256 TSPAN16Q9UKR8 245 aa-0.22□□□□□ -2.44
SNORA40.17-201ENST00000517256 PSG11Q9UQ72 335 aa-0.22□□□□□ -2.44
SNORA40.17-201ENST00000517256 DNAJC16Q9Y2G8 782 aa-0.22□□□□□ -2.44
SNORA40.17-201ENST00000517256 PLEKHA6Q9Y2H5 1048 aa-0.22□□□□□ -2.44
SNORA40.17-201ENST00000517256 CARHSP1Q9Y2V2 147 aaKnown RBP-0.22□□□□□ -2.44
SNORA40.17-201ENST00000517256 CAPN7Q9Y6W3 813 aa-0.22□□□□□ -2.44
SNORA40.17-201ENST00000517256 COL15A1P39059 1388 aa-0.22□□□□□ -2.45
SNORA40.17-201ENST00000517256 TBC1D3DA0A087WVF3 549 aa-0.23□□□□□ -2.45
SNORA40.17-201ENST00000517256 TBC1D3IA0A087WXS9 549 aa-0.23□□□□□ -2.45
SNORA40.17-201ENST00000517256 A0A087X0B3 334 aa-0.23□□□□□ -2.45
SNORA40.17-201ENST00000517256 TBC1D3EA0A087X179 549 aa-0.23□□□□□ -2.45
SNORA40.17-201ENST00000517256 TBC1D3KA0A087X1G2 549 aa-0.23□□□□□ -2.45
SNORA40.17-201ENST00000517256 KLF18A0A0U1RQI7 1052 aa-0.23□□□□□ -2.45
SNORA40.17-201ENST00000517256 CTAGE9A4FU28 777 aa-0.23□□□□□ -2.45
SNORA40.17-201ENST00000517256 TMEM150BA6NC51 233 aa-0.23□□□□□ -2.45
SNORA40.17-201ENST00000517256 TBC1D3BA6NDS4 549 aa-0.23□□□□□ -2.45
SNORA40.17-201ENST00000517256 TMEM8BA6NDV4 472 aa-0.23□□□□□ -2.45
SNORA40.17-201ENST00000517256 TBC1D3FA6NER0 549 aaPredicted RBP-0.23□□□□□ -2.45
SNORA40.17-201ENST00000517256 ZNF233A6NK53 670 aa-0.23□□□□□ -2.45
SNORA40.17-201ENST00000517256 TBC1D3LB9A6J9 549 aa-0.23□□□□□ -2.45
SNORA40.17-201ENST00000517256 FOXE1O00358 373 aaPredicted RBP-0.23□□□□□ -2.45
SNORA40.17-201ENST00000517256 SYNCRIPO60506 623 aaKnown RBP-0.23□□□□□ -2.45
SNORA40.17-201ENST00000517256 COQ9O75208 318 aa-0.23□□□□□ -2.45
SNORA40.17-201ENST00000517256 ZRANB2O95218 330 aaKnown RBP eCLIP-0.23□□□□□ -2.45
SNORA40.17-201ENST00000517256 CCNDBP1O95273 360 aa-0.23□□□□□ -2.45
SNORA40.17-201ENST00000517256 TBC1D3HP0C7X1 549 aa-0.23□□□□□ -2.45
SNORA40.17-201ENST00000517256 CTAGE8P0CG41 777 aa-0.23□□□□□ -2.45
SNORA40.17-201ENST00000517256 KITP10721 976 aa-0.23□□□□□ -2.45
SNORA40.17-201ENST00000517256 HAPLN1P10915 354 aaPredicted RBP-0.23□□□□□ -2.45
SNORA40.17-201ENST00000517256 UMPSP11172 480 aa-0.23□□□□□ -2.45
SNORA40.17-201ENST00000517256 IL1R1P14778 569 aa-0.23□□□□□ -2.45
SNORA40.17-201ENST00000517256 ZNF23P17027 643 aa-0.23□□□□□ -2.45
SNORA40.17-201ENST00000517256 CD58P19256 250 aa-0.23□□□□□ -2.45
SNORA40.17-201ENST00000517256 HNRNPH1P31943 449 aaKnown RBP-0.23□□□□□ -2.45
SNORA40.17-201ENST00000517256 ETV5P41161 510 aa-0.23□□□□□ -2.45
SNORA40.17-201ENST00000517256 RPL34P49207 117 aaKnown RBP-0.23□□□□□ -2.45
SNORA40.17-201ENST00000517256 PAX9P55771 341 aa-0.23□□□□□ -2.45
SNORA40.17-201ENST00000517256 GSCP56915 257 aaPredicted RBP-0.23□□□□□ -2.45
SNORA40.17-201ENST00000517256 CYCSP99999 105 aaKnown RBP-0.23□□□□□ -2.45
SNORA40.17-201ENST00000517256 PRB3Q04118 309 aaPredicted RBP-0.23□□□□□ -2.45
SNORA40.17-201ENST00000517256 RUNX2Q13950 521 aa-0.23□□□□□ -2.45
SNORA40.17-201ENST00000517256 INAVAQ3KP66 663 aa-0.23□□□□□ -2.45
SNORA40.17-201ENST00000517256 ZACNQ401N2 412 aa-0.23□□□□□ -2.45
SNORA40.17-201ENST00000517256 KRTAP13-2Q52LG2 175 aa-0.23□□□□□ -2.45
SNORA40.17-201ENST00000517256 BRDTQ58F21 947 aaPredicted RBP-0.23□□□□□ -2.45
SNORA40.17-201ENST00000517256 PPP6R3Q5H9R7 873 aaPredicted RBP-0.23□□□□□ -2.45
SNORA40.17-201ENST00000517256 SYCP2LQ5T4T6 812 aa-0.23□□□□□ -2.45
SNORA40.17-201ENST00000517256 CYP4A22Q5TCH4 519 aa-0.23□□□□□ -2.45
SNORA40.17-201ENST00000517256 MANEALQ5VSG8 457 aa-0.23□□□□□ -2.45
SNORA40.17-201ENST00000517256 TBC1D3GQ6DHY5 549 aa-0.23□□□□□ -2.45
SNORA40.17-201ENST00000517256 TBC1D3CQ6IPX1 549 aa-0.23□□□□□ -2.45
SNORA40.17-201ENST00000517256 GALNT17Q6IS24 598 aa-0.23□□□□□ -2.45
SNORA40.17-201ENST00000517256 REG3GQ6UW15 175 aa-0.23□□□□□ -2.45
SNORA40.17-201ENST00000517256 Q6ZRP5 223 aa-0.23□□□□□ -2.45
SNORA40.17-201ENST00000517256 PLEKHM3Q6ZWE6 761 aa-0.23□□□□□ -2.45
SNORA40.17-201ENST00000517256 DDX46Q7L014 1031 aaKnown RBP-0.23□□□□□ -2.45
SNORA40.17-201ENST00000517256 ADAMTSL2Q86TH1 951 aa-0.23□□□□□ -2.45
SNORA40.17-201ENST00000517256 MICU3Q86XE3 530 aa-0.23□□□□□ -2.45
SNORA40.17-201ENST00000517256 CATSPER3Q86XQ3 398 aa-0.23□□□□□ -2.45
SNORA40.17-201ENST00000517256 TMTC1Q8IUR5 882 aa-0.23□□□□□ -2.45
Retrieved 100 of 20,778 RNA–protein pairs in 40.6 ms