RNA–Protein interactions for RNA: ENST00000516918.1

SCARNA11.1-201, small Cajal body-specific RNA 11, humanhuman

BASIC

Gene SCARNA11, Length 132 nt, Biotype scaRNA, Subcellular localisation Cytoplasm, Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA11.1-201ENST00000516918 CWC15Q9P013 229 aaKnown RBP6.92□□□□□ -1.3
SCARNA11.1-201ENST00000516918 TMEM63CQ9P1W3 806 aa6.92□□□□□ -1.3
SCARNA11.1-201ENST00000516918 TBC1D29Q9UFV1 150 aa6.92□□□□□ -1.3
SCARNA11.1-201ENST00000516918 CROTQ9UKG9 612 aa6.92□□□□□ -1.3
SCARNA11.1-201ENST00000516918 TLK1Q9UKI8 766 aa6.92□□□□□ -1.3
SCARNA11.1-201ENST00000516918 SIK3Q9Y2K2 1263 aa6.92□□□□□ -1.3
SCARNA11.1-201ENST00000516918 KCTD3Q9Y597 815 aa6.92□□□□□ -1.3
SCARNA11.1-201ENST00000516918 PCDHB3Q9Y5E6 796 aa6.92□□□□□ -1.3
SCARNA11.1-201ENST00000516918 OAS3Q9Y6K5 1087 aaKnown RBP6.92□□□□□ -1.3
SCARNA11.1-201ENST00000516918 A0A1W2PQ67 120 aa6.91□□□□□ -1.3
SCARNA11.1-201ENST00000516918 A1L4Q6 167 aa6.91□□□□□ -1.3
SCARNA11.1-201ENST00000516918 PIPSLA2A3N6 862 aa6.91□□□□□ -1.3
SCARNA11.1-201ENST00000516918 LRRC10BA6NIK2 292 aa6.91□□□□□ -1.3
SCARNA11.1-201ENST00000516918 PRPSAP2O60256 369 aa6.91□□□□□ -1.3
SCARNA11.1-201ENST00000516918 VPS4BO75351 444 aa6.91□□□□□ -1.3
SCARNA11.1-201ENST00000516918 RFPL1O75677 317 aa6.91□□□□□ -1.3
SCARNA11.1-201ENST00000516918 DNAJB5O75953 348 aa6.91□□□□□ -1.3
SCARNA11.1-201ENST00000516918 KIAA0754O94854 1291 aa6.91□□□□□ -1.3
SCARNA11.1-201ENST00000516918 PEX11BO96011 259 aa6.91□□□□□ -1.3
SCARNA11.1-201ENST00000516918 PDGFAP04085 211 aa6.91□□□□□ -1.3
SCARNA11.1-201ENST00000516918 PDHA1P08559 390 aa6.91□□□□□ -1.3
SCARNA11.1-201ENST00000516918 RNF224P0DH78 156 aa6.91□□□□□ -1.3
SCARNA11.1-201ENST00000516918 TYRP1P17643 537 aa6.91□□□□□ -1.3
SCARNA11.1-201ENST00000516918 AMPD1P23109 780 aa6.91□□□□□ -1.3
SCARNA11.1-201ENST00000516918 HSPA9P38646 679 aaKnown RBP6.91□□□□□ -1.3
SCARNA11.1-201ENST00000516918 GFERP55789 205 aa6.91□□□□□ -1.3
SCARNA11.1-201ENST00000516918 TPM4P67936 248 aa6.91□□□□□ -1.3
SCARNA11.1-201ENST00000516918 SH3BP2P78314 561 aa6.91□□□□□ -1.3
SCARNA11.1-201ENST00000516918 PTSQ03393 145 aa6.91□□□□□ -1.3
SCARNA11.1-201ENST00000516918 TYRO3Q06418 890 aa6.91□□□□□ -1.3
SCARNA11.1-201ENST00000516918 DPTQ07507 201 aa6.91□□□□□ -1.3
SCARNA11.1-201ENST00000516918 ITKQ08881 620 aa6.91□□□□□ -1.3
SCARNA11.1-201ENST00000516918 MAMLD1Q13495 774 aa6.91□□□□□ -1.3
SCARNA11.1-201ENST00000516918 LRP8Q14114 963 aa6.91□□□□□ -1.3
SCARNA11.1-201ENST00000516918 DPYSQ14117 519 aa6.91□□□□□ -1.3
SCARNA11.1-201ENST00000516918 FKBP15Q5T1M5 1219 aa6.91□□□□□ -1.3
SCARNA11.1-201ENST00000516918 FHL5Q5TD97 284 aa6.91□□□□□ -1.3
SCARNA11.1-201ENST00000516918 ACAD10Q6JQN1 1059 aa6.91□□□□□ -1.3
SCARNA11.1-201ENST00000516918 TCTN3Q6NUS6 607 aa6.91□□□□□ -1.3
SCARNA11.1-201ENST00000516918 IYDQ6PHW0 289 aa6.91□□□□□ -1.3
SCARNA11.1-201ENST00000516918 SLC9B2Q86UD5 537 aa6.91□□□□□ -1.3
SCARNA11.1-201ENST00000516918 CCDC13Q8IYE1 715 aa6.91□□□□□ -1.3
SCARNA11.1-201ENST00000516918 EFCAB3Q8N7B9 438 aa6.91□□□□□ -1.3
SCARNA11.1-201ENST00000516918 NEK11Q8NG66 645 aa6.91□□□□□ -1.3
SCARNA11.1-201ENST00000516918 CPT1CQ8TCG5 803 aa6.91□□□□□ -1.3
SCARNA11.1-201ENST00000516918 SPOCK2Q92563 424 aa6.91□□□□□ -1.3
SCARNA11.1-201ENST00000516918 SH3KBP1Q96B97 665 aa6.91□□□□□ -1.3
SCARNA11.1-201ENST00000516918 ZNF599Q96NL3 588 aa6.91□□□□□ -1.3
SCARNA11.1-201ENST00000516918 MCCC1Q96RQ3 725 aaPredicted RBP6.91□□□□□ -1.3
SCARNA11.1-201ENST00000516918 MGME1Q9BQP7 344 aa6.91□□□□□ -1.3
SCARNA11.1-201ENST00000516918 BPIFA3Q9BQP9 254 aa6.91□□□□□ -1.3
SCARNA11.1-201ENST00000516918 TWSG1Q9GZX9 223 aa6.91□□□□□ -1.3
SCARNA11.1-201ENST00000516918 STN1Q9H668 368 aaKnown RBP6.91□□□□□ -1.3
SCARNA11.1-201ENST00000516918 NT5MQ9NPB1 228 aa6.91□□□□□ -1.3
SCARNA11.1-201ENST00000516918 CPNE7Q9UBL6 633 aa6.91□□□□□ -1.3
SCARNA11.1-201ENST00000516918 CNOT8Q9UFF9 292 aaKnown RBP6.91□□□□□ -1.3
SCARNA11.1-201ENST00000516918 CNOT6Q9ULM6 557 aaKnown RBP6.91□□□□□ -1.3
SCARNA11.1-201ENST00000516918 VPS4AQ9UN37 437 aa6.91□□□□□ -1.3
SCARNA11.1-201ENST00000516918 POLHQ9Y253 713 aa6.91□□□□□ -1.3
SCARNA11.1-201ENST00000516918 HIVEP3Q5T1R4 2406 aa6.9□□□□□ -1.3
SCARNA11.1-201ENST00000516918 EIF3CLB5ME19 914 aaKnown RBP6.9□□□□□ -1.3
SCARNA11.1-201ENST00000516918 H3BRJ5 948 aa6.9□□□□□ -1.3
SCARNA11.1-201ENST00000516918 MAFKO60675 156 aa6.9□□□□□ -1.3
SCARNA11.1-201ENST00000516918 DNAJC6O75061 913 aa6.9□□□□□ -1.3
SCARNA11.1-201ENST00000516918 SEMA7AO75326 666 aa6.9□□□□□ -1.3
SCARNA11.1-201ENST00000516918 RNF8O76064 485 aa6.9□□□□□ -1.3
SCARNA11.1-201ENST00000516918 NDUFA10O95299 355 aa6.9□□□□□ -1.3
SCARNA11.1-201ENST00000516918 MMP13P45452 471 aa6.9□□□□□ -1.3
SCARNA11.1-201ENST00000516918 LEPRP48357 1165 aaKnown RBP6.9□□□□□ -1.3
SCARNA11.1-201ENST00000516918 HCAR3P49019 387 aa6.9□□□□□ -1.3
SCARNA11.1-201ENST00000516918 ZNF165P49910 485 aa6.9□□□□□ -1.3
SCARNA11.1-201ENST00000516918 STC1P52823 247 aa6.9□□□□□ -1.3
SCARNA11.1-201ENST00000516918 EPHB1P54762 984 aa6.9□□□□□ -1.3
SCARNA11.1-201ENST00000516918 EPHA4P54764 986 aa6.9□□□□□ -1.3
SCARNA11.1-201ENST00000516918 MAP7Q14244 749 aa6.9□□□□□ -1.3
SCARNA11.1-201ENST00000516918 SMTNL2Q2TAL5 461 aa6.9□□□□□ -1.3
SCARNA11.1-201ENST00000516918 CRTC2Q53ET0 693 aaPredicted RBP6.9□□□□□ -1.3
SCARNA11.1-201ENST00000516918 ZNF648Q5T619 568 aaPredicted RBP6.9□□□□□ -1.3
SCARNA11.1-201ENST00000516918 MARC1Q5VT66 337 aa6.9□□□□□ -1.3
SCARNA11.1-201ENST00000516918 CAPRIN2Q6IMN6 1127 aaKnown RBP6.9□□□□□ -1.3
SCARNA11.1-201ENST00000516918 PLEKHA7Q6IQ23 1121 aa6.9□□□□□ -1.3
SCARNA11.1-201ENST00000516918 TMCO3Q6UWJ1 677 aa6.9□□□□□ -1.3
SCARNA11.1-201ENST00000516918 CYP4V2Q6ZWL3 525 aaPredicted RBP6.9□□□□□ -1.3
SCARNA11.1-201ENST00000516918 LYSMD3Q7Z3D4 306 aa6.9□□□□□ -1.3
SCARNA11.1-201ENST00000516918 PLXDC1Q8IUK5 500 aa6.9□□□□□ -1.3
SCARNA11.1-201ENST00000516918 RASGRP3Q8IV61 690 aa6.9□□□□□ -1.3
SCARNA11.1-201ENST00000516918 BBS5Q8N3I7 341 aa6.9□□□□□ -1.3
SCARNA11.1-201ENST00000516918 ATPAF2Q8N5M1 289 aa6.9□□□□□ -1.3
SCARNA11.1-201ENST00000516918 EXD1Q8NHP7 514 aa6.9□□□□□ -1.3
SCARNA11.1-201ENST00000516918 NSMCE1Q8WV22 266 aa6.9□□□□□ -1.3
SCARNA11.1-201ENST00000516918 STAMBPL1Q96FJ0 436 aa6.9□□□□□ -1.3
SCARNA11.1-201ENST00000516918 COX14Q96I36 57 aa6.9□□□□□ -1.3
SCARNA11.1-201ENST00000516918 C9orf72Q96LT7 481 aa6.9□□□□□ -1.3
SCARNA11.1-201ENST00000516918 TGM7Q96PF1 710 aa6.9□□□□□ -1.3
SCARNA11.1-201ENST00000516918 OR6C1Q96RD1 312 aa6.9□□□□□ -1.3
SCARNA11.1-201ENST00000516918 EIF3CQ99613 913 aaKnown RBP6.9□□□□□ -1.3
SCARNA11.1-201ENST00000516918 HERPUD2Q9BSE4 406 aa6.9□□□□□ -1.3
SCARNA11.1-201ENST00000516918 TRIM55Q9BYV6 548 aa6.9□□□□□ -1.3
SCARNA11.1-201ENST00000516918 ZWILCHQ9H900 591 aa6.9□□□□□ -1.3
SCARNA11.1-201ENST00000516918 ARFGAP3Q9NP61 516 aa6.9□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms