RNA–Protein interactions for RNA: ENST00000516259.1

RNU6-390P-201, Transcript of RNA, U6 small nuclear 390, pseudogene, humanhuman

BASIC

Gene RNU6-390P, Length 103 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-390P-201ENST00000516259 NDST4Q9H3R1 872 aa3.31□□□□□ -1.88
RNU6-390P-201ENST00000516259 ZBTB40Q9NUA8 1239 aa3.31□□□□□ -1.88
RNU6-390P-201ENST00000516259 PAG1Q9NWQ8 432 aa3.31□□□□□ -1.88
RNU6-390P-201ENST00000516259 TRNAU1APQ9NX07 287 aaKnown RBP3.31□□□□□ -1.88
RNU6-390P-201ENST00000516259 MCM9Q9NXL9 1143 aa3.31□□□□□ -1.88
RNU6-390P-201ENST00000516259 PTGFRNQ9P2B2 879 aa3.31□□□□□ -1.88
RNU6-390P-201ENST00000516259 DBNLQ9UJU6 430 aaKnown RBP3.31□□□□□ -1.88
RNU6-390P-201ENST00000516259 PTRH2Q9Y3E5 179 aaKnown RBP3.31□□□□□ -1.88
RNU6-390P-201ENST00000516259 A0A0U1RQJ8 604 aa3.3□□□□□ -1.88
RNU6-390P-201ENST00000516259 RPS10-NUDT3A0A1W2PQS6 291 aa3.3□□□□□ -1.88
RNU6-390P-201ENST00000516259 C1orf226A1L170 272 aa3.3□□□□□ -1.88
RNU6-390P-201ENST00000516259 A6NL46 340 aa3.3□□□□□ -1.88
RNU6-390P-201ENST00000516259 A8MV72 311 aaPredicted RBP3.3□□□□□ -1.88
RNU6-390P-201ENST00000516259 MAGEB17A8MXT2 336 aa3.3□□□□□ -1.88
RNU6-390P-201ENST00000516259 CCDC188H7C350 402 aa3.3□□□□□ -1.88
RNU6-390P-201ENST00000516259 I6L893 689 aaPredicted RBP3.3□□□□□ -1.88
RNU6-390P-201ENST00000516259 SOCS2O14508 198 aa3.3□□□□□ -1.88
RNU6-390P-201ENST00000516259 ADAM10O14672 748 aa3.3□□□□□ -1.88
RNU6-390P-201ENST00000516259 SPINT2O43291 252 aa3.3□□□□□ -1.88
RNU6-390P-201ENST00000516259 ITM2AO43736 263 aa3.3□□□□□ -1.88
RNU6-390P-201ENST00000516259 CYP1A2P05177 515 aa3.3□□□□□ -1.88
RNU6-390P-201ENST00000516259 CYC1P08574 325 aa3.3□□□□□ -1.88
RNU6-390P-201ENST00000516259 CCDC175P0C221 793 aa3.3□□□□□ -1.88
RNU6-390P-201ENST00000516259 MYBL1P10243 752 aa3.3□□□□□ -1.88
RNU6-390P-201ENST00000516259 STX2P32856 288 aa3.3□□□□□ -1.88
RNU6-390P-201ENST00000516259 THPOP40225 353 aa3.3□□□□□ -1.88
RNU6-390P-201ENST00000516259 AMTP48728 403 aa3.3□□□□□ -1.88
RNU6-390P-201ENST00000516259 SUOXP51687 545 aa3.3□□□□□ -1.88
RNU6-390P-201ENST00000516259 PGGT1BP53609 377 aa3.3□□□□□ -1.88
RNU6-390P-201ENST00000516259 HNRNPH2P55795 449 aaKnown RBP3.3□□□□□ -1.88
RNU6-390P-201ENST00000516259 SEC61BP60468 96 aaKnown RBP3.3□□□□□ -1.88
RNU6-390P-201ENST00000516259 UBXN2AP68543 259 aa3.3□□□□□ -1.88
RNU6-390P-201ENST00000516259 CTTNQ14247 550 aaKnown RBP3.3□□□□□ -1.88
RNU6-390P-201ENST00000516259 MYBPC2Q14324 1141 aa3.3□□□□□ -1.88
RNU6-390P-201ENST00000516259 GPR18Q14330 331 aa3.3□□□□□ -1.88
RNU6-390P-201ENST00000516259 NR1D2Q14995 579 aa3.3□□□□□ -1.88
RNU6-390P-201ENST00000516259 SYT16Q17RD7 645 aa3.3□□□□□ -1.88
RNU6-390P-201ENST00000516259 AMZ1Q400G9 498 aa3.3□□□□□ -1.88
RNU6-390P-201ENST00000516259 MMEL1Q495T6 779 aa3.3□□□□□ -1.88
RNU6-390P-201ENST00000516259 CBWD6Q4V339 395 aa3.3□□□□□ -1.88
RNU6-390P-201ENST00000516259 ZNF628Q5EBL2 1059 aa3.3□□□□□ -1.88
RNU6-390P-201ENST00000516259 FSCBQ5H9T9 825 aa3.3□□□□□ -1.88
RNU6-390P-201ENST00000516259 CBWD3Q5JTY5 395 aa3.3□□□□□ -1.88
RNU6-390P-201ENST00000516259 HECTD3Q5T447 861 aa3.3□□□□□ -1.88
RNU6-390P-201ENST00000516259 LRCH2Q5VUJ6 765 aa3.3□□□□□ -1.88
RNU6-390P-201ENST00000516259 CST9LP1Q5W188 147 aa3.3□□□□□ -1.88
RNU6-390P-201ENST00000516259 C11orf88Q6PI97 169 aa3.3□□□□□ -1.88
RNU6-390P-201ENST00000516259 PAPD4Q6PIY7 484 aaKnown RBP3.3□□□□□ -1.88
RNU6-390P-201ENST00000516259 BRAT1Q6PJG6 821 aa3.3□□□□□ -1.88
RNU6-390P-201ENST00000516259 SLC2A7Q6PXP3 512 aa3.3□□□□□ -1.88
RNU6-390P-201ENST00000516259 RBPMS2Q6ZRY4 209 aaKnown RBP3.3□□□□□ -1.88
RNU6-390P-201ENST00000516259 Q6ZSV7 163 aa3.3□□□□□ -1.88
RNU6-390P-201ENST00000516259 SLFN11Q7Z7L1 901 aa3.3□□□□□ -1.88
RNU6-390P-201ENST00000516259 NRROSQ86YC3 692 aa3.3□□□□□ -1.88
RNU6-390P-201ENST00000516259 CHERPQ8IWX8 916 aaKnown RBP3.3□□□□□ -1.88
RNU6-390P-201ENST00000516259 CCDC13Q8IYE1 715 aa3.3□□□□□ -1.88
RNU6-390P-201ENST00000516259 GCSAMQ8N6F7 178 aa3.3□□□□□ -1.88
RNU6-390P-201ENST00000516259 XXYLT1Q8NBI6 393 aa3.3□□□□□ -1.88
RNU6-390P-201ENST00000516259 PAPD5Q8NDF8 572 aaKnown RBP3.3□□□□□ -1.88
RNU6-390P-201ENST00000516259 OR1J2Q8NGS2 313 aa3.3□□□□□ -1.88
RNU6-390P-201ENST00000516259 DENND1AQ8TEH3 1009 aa3.3□□□□□ -1.88
RNU6-390P-201ENST00000516259 APBB2Q92870 758 aa3.3□□□□□ -1.88
RNU6-390P-201ENST00000516259 NLRP4Q96MN2 994 aa3.3□□□□□ -1.88
RNU6-390P-201ENST00000516259 LRRC3BQ96PB8 259 aa3.3□□□□□ -1.88
RNU6-390P-201ENST00000516259 RAB3IPQ96QF0 476 aaPredicted RBP3.3□□□□□ -1.88
RNU6-390P-201ENST00000516259 SMC6Q96SB8 1091 aa3.3□□□□□ -1.88
RNU6-390P-201ENST00000516259 SYT17Q9BSW7 474 aa3.3□□□□□ -1.88
RNU6-390P-201ENST00000516259 POLDIP3Q9BY77 421 aaKnown RBP3.3□□□□□ -1.88
RNU6-390P-201ENST00000516259 KCNK15Q9H427 330 aa3.3□□□□□ -1.88
RNU6-390P-201ENST00000516259 SLITRK6Q9H5Y7 841 aa3.3□□□□□ -1.88
RNU6-390P-201ENST00000516259 SLC28A3Q9HAS3 691 aa3.3□□□□□ -1.88
RNU6-390P-201ENST00000516259 POT1Q9NUX5 634 aa3.3□□□□□ -1.88
RNU6-390P-201ENST00000516259 BCCIPQ9P287 314 aaKnown RBP eCLIP3.3□□□□□ -1.88
RNU6-390P-201ENST00000516259 STK39Q9UEW8 545 aa3.3□□□□□ -1.88
RNU6-390P-201ENST00000516259 DDX25Q9UHL0 483 aaKnown RBP3.3□□□□□ -1.88
RNU6-390P-201ENST00000516259 RCOR1Q9UKL0 485 aa3.3□□□□□ -1.88
RNU6-390P-201ENST00000516259 NOL7Q9UMY1 257 aaKnown RBP3.3□□□□□ -1.88
RNU6-390P-201ENST00000516259 R3HDM2Q9Y2K5 976 aaKnown RBP3.3□□□□□ -1.88
RNU6-390P-201ENST00000516259 TRPV2Q9Y5S1 764 aa3.3□□□□□ -1.88
RNU6-390P-201ENST00000516259 TRBC2A0A5B9 178 aa3.29□□□□□ -1.88
RNU6-390P-201ENST00000516259 CLEC18AA5D8T8 446 aa3.29□□□□□ -1.88
RNU6-390P-201ENST00000516259 OR6C75A6NL08 312 aa3.29□□□□□ -1.88
RNU6-390P-201ENST00000516259 KDM4EB2RXH2 506 aaPredicted RBP3.29□□□□□ -1.88
RNU6-390P-201ENST00000516259 DVL1O14640 695 aa3.29□□□□□ -1.88
RNU6-390P-201ENST00000516259 PPEF2O14830 753 aa3.29□□□□□ -1.88
RNU6-390P-201ENST00000516259 NDUFS4O43181 175 aa3.29□□□□□ -1.88
RNU6-390P-201ENST00000516259 PPFIA2O75334 1257 aa3.29□□□□□ -1.88
RNU6-390P-201ENST00000516259 TBCAO75347 108 aaKnown RBP3.29□□□□□ -1.88
RNU6-390P-201ENST00000516259 SYF2O95926 243 aaKnown RBP3.29□□□□□ -1.88
RNU6-390P-201ENST00000516259 SRCP12931 536 aa3.29□□□□□ -1.88
RNU6-390P-201ENST00000516259 SP100P23497 879 aaPredicted RBP3.29□□□□□ -1.88
RNU6-390P-201ENST00000516259 COPB2P35606 906 aa3.29□□□□□ -1.88
RNU6-390P-201ENST00000516259 APOBEC1P41238 236 aaKnown RBP3.29□□□□□ -1.88
RNU6-390P-201ENST00000516259 MXI1P50539 228 aa3.29□□□□□ -1.88
RNU6-390P-201ENST00000516259 CCR3P51677 355 aa3.29□□□□□ -1.88
RNU6-390P-201ENST00000516259 TMPRSS3P57727 454 aa3.29□□□□□ -1.88
RNU6-390P-201ENST00000516259 FOXM1Q08050 763 aa3.29□□□□□ -1.88
RNU6-390P-201ENST00000516259 Q0VFX4 171 aa3.29□□□□□ -1.88
RNU6-390P-201ENST00000516259 GRSF1Q12849 480 aaKnown RBP eCLIP3.29□□□□□ -1.88
RNU6-390P-201ENST00000516259 SCARB2Q14108 478 aa3.29□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms