RNA–Protein interactions for RNA: ENST00000515597.1

LINC01088-211, Transcript of long intergenic non-protein coding RNA 1088, humanhuman

TSL 1 (best)

Gene LINC01088, Length 664 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01088-211ENST00000515597 PCDH20Q8N6Y1 951 aaKnown RBP3.75□□□□□ -1.81
LINC01088-211ENST00000515597 CADM4Q8NFZ8 388 aa3.75□□□□□ -1.81
LINC01088-211ENST00000515597 PIGTQ969N2 578 aa3.75□□□□□ -1.81
LINC01088-211ENST00000515597 KIF1BPQ96EK5 621 aa3.75□□□□□ -1.81
LINC01088-211ENST00000515597 RNF125Q96EQ8 232 aa3.75□□□□□ -1.81
LINC01088-211ENST00000515597 ALG14Q96F25 216 aa3.75□□□□□ -1.81
LINC01088-211ENST00000515597 HCFC1R1Q9NWW0 138 aa3.75□□□□□ -1.81
LINC01088-211ENST00000515597 ARHGAP26Q9UNA1 814 aa3.75□□□□□ -1.81
LINC01088-211ENST00000515597 OR2W1Q9Y3N9 320 aa3.75□□□□□ -1.81
LINC01088-211ENST00000515597 DIP2BQ9P265 1576 aa3.75□□□□□ -1.81
LINC01088-211ENST00000515597 SMCHD1A6NHR9 2005 aa3.75□□□□□ -1.81
LINC01088-211ENST00000515597 PTPRCP08575 1304 aa3.74□□□□□ -1.81
LINC01088-211ENST00000515597 IGKV3D-15A0A087WSY6 115 aa3.74□□□□□ -1.81
LINC01088-211ENST00000515597 IGKV3D-20A0A0C4DH25 116 aa3.74□□□□□ -1.81
LINC01088-211ENST00000515597 CCDC189A1A4V9 331 aa3.74□□□□□ -1.81
LINC01088-211ENST00000515597 CTAGE9A4FU28 777 aa3.74□□□□□ -1.81
LINC01088-211ENST00000515597 LRRC53A6NM62 1247 aa3.74□□□□□ -1.81
LINC01088-211ENST00000515597 F9P00740 461 aa3.74□□□□□ -1.81
LINC01088-211ENST00000515597 CTAGE8P0CG41 777 aa3.74□□□□□ -1.81
LINC01088-211ENST00000515597 MMP14P50281 582 aa3.74□□□□□ -1.81
LINC01088-211ENST00000515597 EEF1A1P68104 462 aaKnown RBP3.74□□□□□ -1.81
LINC01088-211ENST00000515597 CSNK2A1P68400 391 aaPredicted RBP3.74□□□□□ -1.81
LINC01088-211ENST00000515597 FOXM1Q08050 763 aa3.74□□□□□ -1.81
LINC01088-211ENST00000515597 GTF2H2Q13888 395 aa3.74□□□□□ -1.81
LINC01088-211ENST00000515597 FGFBP1Q14512 234 aa3.74□□□□□ -1.81
LINC01088-211ENST00000515597 DRAP1Q14919 205 aaPredicted RBP3.74□□□□□ -1.81
LINC01088-211ENST00000515597 GSTA3Q16772 222 aa3.74□□□□□ -1.81
LINC01088-211ENST00000515597 CCNYL2Q5T2Q4 361 aa3.74□□□□□ -1.81
LINC01088-211ENST00000515597 EEF1A1P5Q5VTE0 462 aa3.74□□□□□ -1.81
LINC01088-211ENST00000515597 ZNF772Q68DY9 489 aaPredicted RBP3.74□□□□□ -1.81
LINC01088-211ENST00000515597 GTF2H2CQ6P1K8 395 aa3.74□□□□□ -1.81
LINC01088-211ENST00000515597 ZNF852Q6ZMS4 543 aa3.74□□□□□ -1.81
LINC01088-211ENST00000515597 MMS22LQ6ZRQ5 1243 aa3.74□□□□□ -1.81
LINC01088-211ENST00000515597 NRROSQ86YC3 692 aa3.74□□□□□ -1.81
LINC01088-211ENST00000515597 ARMC8Q8IUR7 673 aa3.74□□□□□ -1.81
LINC01088-211ENST00000515597 CTAGE4Q8IX94 777 aa3.74□□□□□ -1.81
LINC01088-211ENST00000515597 BEST3Q8N1M1 668 aa3.74□□□□□ -1.81
LINC01088-211ENST00000515597 TSPYL6Q8N831 410 aa3.74□□□□□ -1.81
LINC01088-211ENST00000515597 CSNK2A3Q8NEV1 391 aa3.74□□□□□ -1.81
LINC01088-211ENST00000515597 NFKBIDQ8NI38 313 aa3.74□□□□□ -1.81
LINC01088-211ENST00000515597 THAP6Q8TBB0 222 aa3.74□□□□□ -1.81
LINC01088-211ENST00000515597 TAS1R2Q8TE23 839 aa3.74□□□□□ -1.81
LINC01088-211ENST00000515597 ST8SIA4Q92187 359 aa3.74□□□□□ -1.81
LINC01088-211ENST00000515597 PCYT2Q99447 389 aa3.74□□□□□ -1.81
LINC01088-211ENST00000515597 TMEM47Q9BQJ4 181 aa3.74□□□□□ -1.81
LINC01088-211ENST00000515597 LTB4R2Q9NPC1 389 aa3.74□□□□□ -1.81
LINC01088-211ENST00000515597 ASAH2Q9NR71 780 aa3.74□□□□□ -1.81
LINC01088-211ENST00000515597 SLC6A13Q9NSD5 602 aa3.74□□□□□ -1.81
LINC01088-211ENST00000515597 C9orf78Q9NZ63 289 aaPredicted RBP3.74□□□□□ -1.81
LINC01088-211ENST00000515597 AAR2Q9Y312 384 aaKnown RBP3.74□□□□□ -1.81
LINC01088-211ENST00000515597 CYP46A1Q9Y6A2 500 aa3.74□□□□□ -1.81
LINC01088-211ENST00000515597 PPRC1Q5VV67 1664 aaKnown RBP3.74□□□□□ -1.81
LINC01088-211ENST00000515597 TSPOAP1O95153 1857 aa3.73□□□□□ -1.81
LINC01088-211ENST00000515597 VCYO14598 125 aa3.73□□□□□ -1.81
LINC01088-211ENST00000515597 SPINT2O43291 252 aa3.73□□□□□ -1.81
LINC01088-211ENST00000515597 SEC31AO94979 1220 aaKnown RBP3.73□□□□□ -1.81
LINC01088-211ENST00000515597 EGFP01133 1207 aa3.73□□□□□ -1.81
LINC01088-211ENST00000515597 PAX1P15863 534 aa3.73□□□□□ -1.81
LINC01088-211ENST00000515597 HOXA1P49639 335 aaPredicted RBP3.73□□□□□ -1.81
LINC01088-211ENST00000515597 NR0B1P51843 470 aaKnown RBP3.73□□□□□ -1.81
LINC01088-211ENST00000515597 HSPA2P54652 639 aa3.73□□□□□ -1.81
LINC01088-211ENST00000515597 ISL1P61371 349 aa3.73□□□□□ -1.81
LINC01088-211ENST00000515597 SREBF2Q12772 1141 aa3.73□□□□□ -1.81
LINC01088-211ENST00000515597 GAGE5Q13069 117 aa3.73□□□□□ -1.81
LINC01088-211ENST00000515597 GAGE6Q13070 117 aa3.73□□□□□ -1.81
LINC01088-211ENST00000515597 DECR1Q16698 335 aa3.73□□□□□ -1.81
LINC01088-211ENST00000515597 COL28A1Q2UY09 1125 aa3.73□□□□□ -1.81
LINC01088-211ENST00000515597 PDSS1Q5T2R2 415 aa3.73□□□□□ -1.81
LINC01088-211ENST00000515597 FAM69AQ5T7M9 428 aa3.73□□□□□ -1.81
LINC01088-211ENST00000515597 SLC9C2Q5TAH2 1124 aa3.73□□□□□ -1.81
LINC01088-211ENST00000515597 INO80CQ6PI98 192 aaPredicted RBP3.73□□□□□ -1.81
LINC01088-211ENST00000515597 KCTD8Q6ZWB6 473 aa3.73□□□□□ -1.81
LINC01088-211ENST00000515597 CACNA2D4Q7Z3S7 1137 aa3.73□□□□□ -1.81
LINC01088-211ENST00000515597 HEATR4Q86WZ0 1026 aa3.73□□□□□ -1.81
LINC01088-211ENST00000515597 OR5R1Q8NH85 324 aa3.73□□□□□ -1.81
LINC01088-211ENST00000515597 GRAPLQ8TC17 118 aaPredicted RBP3.73□□□□□ -1.81
LINC01088-211ENST00000515597 TAAR8Q969N4 342 aa3.73□□□□□ -1.81
LINC01088-211ENST00000515597 RHBDF1Q96CC6 855 aa3.73□□□□□ -1.81
LINC01088-211ENST00000515597 ORAI1Q96D31 301 aa3.73□□□□□ -1.81
LINC01088-211ENST00000515597 GRAMD2BQ96HH9 432 aa3.73□□□□□ -1.81
LINC01088-211ENST00000515597 PPP1R13BQ96KQ4 1090 aa3.73□□□□□ -1.81
LINC01088-211ENST00000515597 ZNF583Q96ND8 569 aa3.73□□□□□ -1.81
LINC01088-211ENST00000515597 QRFPRQ96P65 431 aa3.73□□□□□ -1.81
LINC01088-211ENST00000515597 NR1H4Q96RI1 486 aaPredicted RBP3.73□□□□□ -1.81
LINC01088-211ENST00000515597 SEC62Q99442 399 aaKnown RBP3.73□□□□□ -1.81
LINC01088-211ENST00000515597 EIF2AK1Q9BQI3 630 aaKnown RBP3.73□□□□□ -1.81
LINC01088-211ENST00000515597 NEURL2Q9BR09 285 aa3.73□□□□□ -1.81
LINC01088-211ENST00000515597 POLR3GLQ9BT43 218 aa3.73□□□□□ -1.81
LINC01088-211ENST00000515597 JMJD4Q9H9V9 463 aa3.73□□□□□ -1.81
LINC01088-211ENST00000515597 UBN1Q9NPG3 1134 aa3.73□□□□□ -1.81
LINC01088-211ENST00000515597 ACSL5Q9ULC5 683 aa3.73□□□□□ -1.81
LINC01088-211ENST00000515597 PADI3Q9ULW8 664 aa3.73□□□□□ -1.81
LINC01088-211ENST00000515597 KDM3AQ9Y4C1 1321 aa3.72□□□□□ -1.81
LINC01088-211ENST00000515597 A0A1B0GVC2 190 aa3.72□□□□□ -1.81
LINC01088-211ENST00000515597 A6NLC8 198 aa3.72□□□□□ -1.81
LINC01088-211ENST00000515597 ZNHIT1O43257 154 aa3.72□□□□□ -1.81
LINC01088-211ENST00000515597 AGR2O95994 175 aa3.72□□□□□ -1.81
LINC01088-211ENST00000515597 ABCD3P28288 659 aa3.72□□□□□ -1.81
LINC01088-211ENST00000515597 TERF1P54274 439 aa3.72□□□□□ -1.81
LINC01088-211ENST00000515597 TAS2R38P59533 333 aa3.72□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms