RNA–Protein interactions for RNA: ENST00000515311.5

LSM6-207, Transcript of LSM6 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 4

Gene LSM6, Length 545 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM6-207ENST00000515311 PRSS33Q8NF86 280 aa20.84■□□□□ 0.93
LSM6-207ENST00000515311 GPR150Q8NGU9 434 aa20.84■□□□□ 0.93
LSM6-207ENST00000515311 CAVIN3Q969G5 261 aa20.84■□□□□ 0.93
LSM6-207ENST00000515311 ULK4Q96C45 1275 aa20.84■□□□□ 0.93
LSM6-207ENST00000515311 MYOCQ99972 504 aa20.84■□□□□ 0.93
LSM6-207ENST00000515311 TEX101Q9BY14 249 aa20.84■□□□□ 0.93
LSM6-207ENST00000515311 ASB8Q9H765 288 aa20.84■□□□□ 0.93
LSM6-207ENST00000515311 CATSPERZQ9NTU4 200 aa20.84■□□□□ 0.93
LSM6-207ENST00000515311 C20orf96Q9NUD7 363 aaPredicted RBP20.84■□□□□ 0.93
LSM6-207ENST00000515311 MOCS1Q9NZB8 636 aa20.84■□□□□ 0.93
LSM6-207ENST00000515311 POM121BA6NF01 834 aa20.83■□□□□ 0.93
LSM6-207ENST00000515311 OR51F1A6NGY5 319 aa20.83■□□□□ 0.93
LSM6-207ENST00000515311 A6NNZ2 444 aa20.83■□□□□ 0.93
LSM6-207ENST00000515311 CD3EAPO15446 510 aaKnown RBP20.83■□□□□ 0.93
LSM6-207ENST00000515311 HOXC4P09017 264 aaPredicted RBP20.83■□□□□ 0.93
LSM6-207ENST00000515311 PHBP35232 272 aa20.83■□□□□ 0.93
LSM6-207ENST00000515311 DPP6P42658 865 aa20.83■□□□□ 0.93
LSM6-207ENST00000515311 PMS2P54278 862 aa20.83■□□□□ 0.93
LSM6-207ENST00000515311 PFN3P60673 137 aa20.83■□□□□ 0.93
LSM6-207ENST00000515311 YPEL5P62699 121 aa20.83■□□□□ 0.93
LSM6-207ENST00000515311 THOC5Q13769 683 aaKnown RBP20.83■□□□□ 0.93
LSM6-207ENST00000515311 STAT4Q14765 748 aa20.83■□□□□ 0.93
LSM6-207ENST00000515311 FASTKD1Q53R41 847 aaKnown RBP20.83■□□□□ 0.93
LSM6-207ENST00000515311 ZRANB3Q5FWF4 1079 aa20.83■□□□□ 0.93
LSM6-207ENST00000515311 AARS2Q5JTZ9 985 aaKnown RBP20.83■□□□□ 0.93
LSM6-207ENST00000515311 MRNIPQ6NTE8 343 aa20.83■□□□□ 0.93
LSM6-207ENST00000515311 NEPROQ6NW34 567 aa20.83■□□□□ 0.93
LSM6-207ENST00000515311 PTAR1Q7Z6K3 402 aaPredicted RBP20.83■□□□□ 0.93
LSM6-207ENST00000515311 IQCHQ86VS3 1027 aa20.83■□□□□ 0.93
LSM6-207ENST00000515311 KCNMB4Q86W47 210 aa20.83■□□□□ 0.93
LSM6-207ENST00000515311 RGL4Q8IZJ4 473 aa20.83■□□□□ 0.93
LSM6-207ENST00000515311 GABPB2Q8TAK5 448 aaPredicted RBP20.83■□□□□ 0.93
LSM6-207ENST00000515311 CALML6Q8TD86 181 aa20.83■□□□□ 0.93
LSM6-207ENST00000515311 BTN2A2Q8WVV5 523 aa20.83■□□□□ 0.93
LSM6-207ENST00000515311 SCG3Q8WXD2 468 aaKnown RBP20.83■□□□□ 0.93
LSM6-207ENST00000515311 GLYATL1Q969I3 302 aa20.83■□□□□ 0.93
LSM6-207ENST00000515311 TBRG4Q969Z0 631 aaKnown RBP eCLIP20.83■□□□□ 0.93
LSM6-207ENST00000515311 HIC2Q96JB3 615 aa20.83■□□□□ 0.93
LSM6-207ENST00000515311 BMFQ96LC9 184 aa20.83■□□□□ 0.93
LSM6-207ENST00000515311 SLC6A18Q96N87 628 aa20.83■□□□□ 0.93
LSM6-207ENST00000515311 FAM167BQ9BTA0 163 aa20.83■□□□□ 0.93
LSM6-207ENST00000515311 SEMA4AQ9H3S1 761 aa20.83■□□□□ 0.93
LSM6-207ENST00000515311 WDR26Q9H7D7 661 aa20.83■□□□□ 0.93
LSM6-207ENST00000515311 TM9SF3Q9HD45 589 aa20.83■□□□□ 0.93
LSM6-207ENST00000515311 CNOT6Q9ULM6 557 aaKnown RBP20.83■□□□□ 0.93
LSM6-207ENST00000515311 R4GN57 208 aa20.83■□□□□ 0.93
LSM6-207ENST00000515311 TCRBV9S1A1TA0A576 114 aa20.82■□□□□ 0.92
LSM6-207ENST00000515311 UGT1A9O60656 530 aa20.82■□□□□ 0.92
LSM6-207ENST00000515311 UGT1A6P19224 532 aa20.82■□□□□ 0.92
LSM6-207ENST00000515311 UGT1A1P22309 533 aa20.82■□□□□ 0.92
LSM6-207ENST00000515311 UGT1A4P22310 534 aa20.82■□□□□ 0.92
LSM6-207ENST00000515311 ITPKAP23677 461 aa20.82■□□□□ 0.92
LSM6-207ENST00000515311 MAOBP27338 520 aa20.82■□□□□ 0.92
LSM6-207ENST00000515311 STX2P32856 288 aa20.82■□□□□ 0.92
LSM6-207ENST00000515311 HOXD12P35452 270 aa20.82■□□□□ 0.92
LSM6-207ENST00000515311 UGT1A3P35503 534 aa20.82■□□□□ 0.92
LSM6-207ENST00000515311 UGT1A5P35504 534 aa20.82■□□□□ 0.92
LSM6-207ENST00000515311 RABIFP47224 123 aa20.82■□□□□ 0.92
LSM6-207ENST00000515311 CLDN2P57739 230 aa20.82■□□□□ 0.92
LSM6-207ENST00000515311 OVGP1Q12889 678 aa20.82■□□□□ 0.92
LSM6-207ENST00000515311 BRD3Q15059 726 aa20.82■□□□□ 0.92
LSM6-207ENST00000515311 LYPLAL1Q5VWZ2 237 aa20.82■□□□□ 0.92
LSM6-207ENST00000515311 PEAR1Q5VY43 1037 aaPredicted RBP20.82■□□□□ 0.92
LSM6-207ENST00000515311 TRMT10BQ6PF06 316 aaKnown RBP20.82■□□□□ 0.92
LSM6-207ENST00000515311 CERS6Q6ZMG9 384 aa20.82■□□□□ 0.92
LSM6-207ENST00000515311 CAPN12Q6ZSI9 719 aa20.82■□□□□ 0.92
LSM6-207ENST00000515311 HEATR4Q86WZ0 1026 aa20.82■□□□□ 0.92
LSM6-207ENST00000515311 PHYKPLQ8IUZ5 450 aa20.82■□□□□ 0.92
LSM6-207ENST00000515311 PIANPQ8IYJ0 282 aa20.82■□□□□ 0.92
LSM6-207ENST00000515311 UNC5BQ8IZJ1 945 aa20.82■□□□□ 0.92
LSM6-207ENST00000515311 NXPE1Q8N323 547 aa20.82■□□□□ 0.92
LSM6-207ENST00000515311 MFSD2AQ8NA29 543 aa20.82■□□□□ 0.92
LSM6-207ENST00000515311 COX14Q96I36 57 aa20.82■□□□□ 0.92
LSM6-207ENST00000515311 LOXL4Q96JB6 756 aa20.82■□□□□ 0.92
LSM6-207ENST00000515311 APOOQ9BUR5 198 aa20.82■□□□□ 0.92
LSM6-207ENST00000515311 FUT8Q9BYC5 575 aa20.82■□□□□ 0.92
LSM6-207ENST00000515311 MIR1-1HGQ9H1L0 117 aa20.82■□□□□ 0.92
LSM6-207ENST00000515311 VPS37BQ9H9H4 285 aa20.82■□□□□ 0.92
LSM6-207ENST00000515311 UGT1A7Q9HAW7 530 aa20.82■□□□□ 0.92
LSM6-207ENST00000515311 UGT1A10Q9HAW8 530 aa20.82■□□□□ 0.92
LSM6-207ENST00000515311 UGT1A8Q9HAW9 530 aa20.82■□□□□ 0.92
LSM6-207ENST00000515311 AASDHPPTQ9NRN7 309 aa20.82■□□□□ 0.92
LSM6-207ENST00000515311 PHPT1Q9NRX4 125 aaPredicted RBP20.82■□□□□ 0.92
LSM6-207ENST00000515311 CRLS1Q9UJA2 301 aa20.82■□□□□ 0.92
LSM6-207ENST00000515311 PILRBQ9UKJ0 227 aa20.82■□□□□ 0.92
LSM6-207ENST00000515311 TMPRSS11EQ9UL52 423 aa20.82■□□□□ 0.92
LSM6-207ENST00000515311 CA5BQ9Y2D0 317 aa20.82■□□□□ 0.92
LSM6-207ENST00000515311 SLCO1B1Q9Y6L6 691 aa20.82■□□□□ 0.92
LSM6-207ENST00000515311 CCDC151A5D8V7 595 aa20.81■□□□□ 0.92
LSM6-207ENST00000515311 H0Y8X5 98 aa20.81■□□□□ 0.92
LSM6-207ENST00000515311 BCAT2O15382 392 aaPredicted RBP20.81■□□□□ 0.92
LSM6-207ENST00000515311 GPR39O43194 453 aa20.81■□□□□ 0.92
LSM6-207ENST00000515311 ABHD2P08910 425 aa20.81■□□□□ 0.92
LSM6-207ENST00000515311 ERVK-10P10266 1014 aa20.81■□□□□ 0.92
LSM6-207ENST00000515311 MYCLP1P12525 358 aaPredicted RBP20.81■□□□□ 0.92
LSM6-207ENST00000515311 OGNP20774 298 aaKnown RBP20.81■□□□□ 0.92
LSM6-207ENST00000515311 CDK3Q00526 305 aa20.81■□□□□ 0.92
LSM6-207ENST00000515311 MGAT5Q09328 741 aa20.81■□□□□ 0.92
LSM6-207ENST00000515311 HSP90AA5PQ58FG0 334 aa20.81■□□□□ 0.92
LSM6-207ENST00000515311 PSAPL1Q6NUJ1 521 aa20.81■□□□□ 0.92
Retrieved 100 of 20,778 RNA–protein pairs in 55 ms