RNA–Protein interactions for RNA: ENST00000512340.5

NR1I3-231, Transcript of nuclear receptor subfamily 1 group I member 3, human

TSL 1 (best)

Gene NR1I3, Length 891 nt, Biotype nonsense mediated decay.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
NR1I3-231	ENST00000512340	GLYATL1P3	A0A0U1RQE8	302 aa		7.42	□□□□□ -1.22
NR1I3-231	ENST00000512340	PRSS38	A1L453	326 aa		7.42	□□□□□ -1.22
NR1I3-231	ENST00000512340	DCDC2B	A2VCK2	349 aa		7.42	□□□□□ -1.22
NR1I3-231	ENST00000512340	LMO7DN	F2Z398	122 aa		7.42	□□□□□ -1.22
NR1I3-231	ENST00000512340	SMAP	O00193	183 aa		7.42	□□□□□ -1.22
NR1I3-231	ENST00000512340	QSOX1	O00391	747 aa		7.42	□□□□□ -1.22
NR1I3-231	ENST00000512340	KCNJ13	O60928	360 aa		7.42	□□□□□ -1.22
NR1I3-231	ENST00000512340	KCNK5	O95279	499 aa		7.42	□□□□□ -1.22
NR1I3-231	ENST00000512340	KRT14	P02533	472 aa		7.42	□□□□□ -1.22
NR1I3-231	ENST00000512340	IVL	P07476	585 aa		7.42	□□□□□ -1.22
NR1I3-231	ENST00000512340	ATXN1L	P0C7T5	689 aa	Known RBP	7.42	□□□□□ -1.22
NR1I3-231	ENST00000512340	PIRT	P0C851	137 aa		7.42	□□□□□ -1.22
NR1I3-231	ENST00000512340	NEFH	P12036	1026 aa		7.42	□□□□□ -1.22
NR1I3-231	ENST00000512340	CD59	P13987	128 aa		7.42	□□□□□ -1.22
NR1I3-231	ENST00000512340	CKMT2	P17540	419 aa		7.42	□□□□□ -1.22
NR1I3-231	ENST00000512340	PAM	P19021	973 aa		7.42	□□□□□ -1.22
NR1I3-231	ENST00000512340	ADRA1D	P25100	572 aa		7.42	□□□□□ -1.22
NR1I3-231	ENST00000512340	COIL	P38432	576 aa	Predicted RBP	7.42	□□□□□ -1.22
NR1I3-231	ENST00000512340	ADCY8	P40145	1251 aa		7.42	□□□□□ -1.22
NR1I3-231	ENST00000512340	NPY2R	P49146	381 aa		7.42	□□□□□ -1.22
NR1I3-231	ENST00000512340	SIM1	P81133	766 aa	Predicted RBP	7.42	□□□□□ -1.22
NR1I3-231	ENST00000512340	IL9R	Q01113	521 aa		7.42	□□□□□ -1.22
NR1I3-231	ENST00000512340	BNC1	Q01954	994 aa		7.42	□□□□□ -1.22
NR1I3-231	ENST00000512340	GPS1	Q13098	491 aa		7.42	□□□□□ -1.22
NR1I3-231	ENST00000512340	SEMA5A	Q13591	1074 aa		7.42	□□□□□ -1.22
NR1I3-231	ENST00000512340	GPR33	Q49SQ1	333 aa		7.42	□□□□□ -1.22
NR1I3-231	ENST00000512340	AARS2	Q5JTZ9	985 aa	Known RBP	7.42	□□□□□ -1.22
NR1I3-231	ENST00000512340	HENMT1	Q5T8I9	393 aa	Known RBP	7.42	□□□□□ -1.22
NR1I3-231	ENST00000512340	LYPLAL1	Q5VWZ2	237 aa		7.42	□□□□□ -1.22
NR1I3-231	ENST00000512340	ALS2CL	Q60I27	953 aa		7.42	□□□□□ -1.22
NR1I3-231	ENST00000512340	PSAPL1	Q6NUJ1	521 aa		7.42	□□□□□ -1.22
NR1I3-231	ENST00000512340	ZCCHC8	Q6NZY4	707 aa	Known RBP	7.42	□□□□□ -1.22
NR1I3-231	ENST00000512340	DOK6	Q6PKX4	331 aa		7.42	□□□□□ -1.22
NR1I3-231	ENST00000512340	DBX2	Q6ZNG2	339 aa		7.42	□□□□□ -1.22
NR1I3-231	ENST00000512340	MAATS1	Q7Z4T9	603 aa		7.42	□□□□□ -1.22
NR1I3-231	ENST00000512340	TAF8	Q7Z7C8	310 aa		7.42	□□□□□ -1.22
NR1I3-231	ENST00000512340	GLRX5	Q86SX6	157 aa		7.42	□□□□□ -1.22
NR1I3-231	ENST00000512340	PIP4P1	Q86T03	277 aa		7.42	□□□□□ -1.22
NR1I3-231	ENST00000512340	EID2	Q8N6I1	236 aa		7.42	□□□□□ -1.22
NR1I3-231	ENST00000512340	BBOF1	Q8ND07	529 aa		7.42	□□□□□ -1.22
NR1I3-231	ENST00000512340	ZNF548	Q8NEK5	533 aa	Predicted RBP	7.42	□□□□□ -1.22
NR1I3-231	ENST00000512340	DEFB124	Q8NES8	71 aa		7.42	□□□□□ -1.22
NR1I3-231	ENST00000512340	OR2I1P	Q8NGU4	316 aa		7.42	□□□□□ -1.22
NR1I3-231	ENST00000512340	OR4C6	Q8NH72	309 aa		7.42	□□□□□ -1.22
NR1I3-231	ENST00000512340	WDR48	Q8TAF3	677 aa		7.42	□□□□□ -1.22
NR1I3-231	ENST00000512340	RNF217	Q8TC41	542 aa		7.42	□□□□□ -1.22
NR1I3-231	ENST00000512340	STYX	Q8WUJ0	223 aa		7.42	□□□□□ -1.22
NR1I3-231	ENST00000512340	PEX13	Q92968	403 aa		7.42	□□□□□ -1.22
NR1I3-231	ENST00000512340	NAT6	Q93015	286 aa		7.42	□□□□□ -1.22
NR1I3-231	ENST00000512340	SCAMP4	Q969E2	229 aa		7.42	□□□□□ -1.22
NR1I3-231	ENST00000512340	GLYATL1	Q969I3	302 aa		7.42	□□□□□ -1.22
NR1I3-231	ENST00000512340	FUBP1	Q96AE4	644 aa	Known RBP	7.42	□□□□□ -1.22
NR1I3-231	ENST00000512340	VOPP1	Q96AW1	172 aa		7.42	□□□□□ -1.22
NR1I3-231	ENST00000512340	SGSM3	Q96HU1	749 aa		7.42	□□□□□ -1.22
NR1I3-231	ENST00000512340	CNDP2	Q96KP4	475 aa	Known RBP	7.42	□□□□□ -1.22
NR1I3-231	ENST00000512340	APOL2	Q9BQE5	337 aa		7.42	□□□□□ -1.22
NR1I3-231	ENST00000512340	FRMD8	Q9BZ67	464 aa	Predicted RBP	7.42	□□□□□ -1.22
NR1I3-231	ENST00000512340	IL22	Q9GZX6	179 aa		7.42	□□□□□ -1.22
NR1I3-231	ENST00000512340	ABCG4	Q9H172	646 aa		7.42	□□□□□ -1.22
NR1I3-231	ENST00000512340	CARS2	Q9HA77	564 aa	Known RBP	7.42	□□□□□ -1.22
NR1I3-231	ENST00000512340	IL21R	Q9HBE5	538 aa		7.42	□□□□□ -1.22
NR1I3-231	ENST00000512340	ETNK1	Q9HBU6	452 aa		7.42	□□□□□ -1.22
NR1I3-231	ENST00000512340	TRIM39	Q9HCM9	518 aa		7.42	□□□□□ -1.22
NR1I3-231	ENST00000512340	CYP4F12	Q9HCS2	524 aa		7.42	□□□□□ -1.22
NR1I3-231	ENST00000512340	XAB2	Q9HCS7	855 aa	Known RBP	7.42	□□□□□ -1.22
NR1I3-231	ENST00000512340	GPR27	Q9NS67	375 aa		7.42	□□□□□ -1.22
NR1I3-231	ENST00000512340	RXFP3	Q9NSD7	469 aa		7.42	□□□□□ -1.22
NR1I3-231	ENST00000512340	TRNAU1AP	Q9NX07	287 aa	Known RBP	7.42	□□□□□ -1.22
NR1I3-231	ENST00000512340	SAMD15	Q9P1V8	674 aa		7.42	□□□□□ -1.22
NR1I3-231	ENST00000512340	ASIC3	Q9UHC3	531 aa		7.42	□□□□□ -1.22
NR1I3-231	ENST00000512340	CRLS1	Q9UJA2	301 aa		7.42	□□□□□ -1.22
NR1I3-231	ENST00000512340	ANAPC5	Q9UJX4	755 aa		7.42	□□□□□ -1.22
NR1I3-231	ENST00000512340	PCOLCE2	Q9UKZ9	415 aa		7.42	□□□□□ -1.22
NR1I3-231	ENST00000512340	GPSM3	Q9Y4H4	160 aa		7.42	□□□□□ -1.22
NR1I3-231	ENST00000512340	PCDHGA1	Q9Y5H4	931 aa		7.42	□□□□□ -1.22
NR1I3-231	ENST00000512340	PLXNA2	O75051	1894 aa		7.41	□□□□□ -1.22
NR1I3-231	ENST00000512340	ADAMTS9	Q9P2N4	1935 aa		7.41	□□□□□ -1.22
NR1I3-231	ENST00000512340	TDRD6	O60522	2096 aa	Known RBP	7.41	□□□□□ -1.22
NR1I3-231	ENST00000512340	TRBV21OR9-2	A0A075B6F4	123 aa	Predicted RBP	7.41	□□□□□ -1.22
NR1I3-231	ENST00000512340	MAGEB16	A2A368	324 aa		7.41	□□□□□ -1.22
NR1I3-231	ENST00000512340	TMEM8B	A6NDV4	472 aa		7.41	□□□□□ -1.22
NR1I3-231	ENST00000512340	KMO	O15229	486 aa		7.41	□□□□□ -1.22
NR1I3-231	ENST00000512340	INPP4B	O15327	924 aa		7.41	□□□□□ -1.22
NR1I3-231	ENST00000512340	FFAR2	O15552	330 aa		7.41	□□□□□ -1.22
NR1I3-231	ENST00000512340	SDC3	O75056	442 aa		7.41	□□□□□ -1.22
NR1I3-231	ENST00000512340	SUN1	O94901	812 aa		7.41	□□□□□ -1.22
NR1I3-231	ENST00000512340	CDK14	O94921	469 aa		7.41	□□□□□ -1.22
NR1I3-231	ENST00000512340	METTL18	O95568	372 aa		7.41	□□□□□ -1.22
NR1I3-231	ENST00000512340	TPSB2	P20231	275 aa		7.41	□□□□□ -1.22
NR1I3-231	ENST00000512340	MSH3	P20585	1137 aa		7.41	□□□□□ -1.22
NR1I3-231	ENST00000512340	AKT1	P31749	480 aa		7.41	□□□□□ -1.22
NR1I3-231	ENST00000512340	RPL22	P35268	128 aa	Known RBP	7.41	□□□□□ -1.22
NR1I3-231	ENST00000512340	ADRA1A	P35348	466 aa		7.41	□□□□□ -1.22
NR1I3-231	ENST00000512340	CHRNA4	P43681	627 aa		7.41	□□□□□ -1.22
NR1I3-231	ENST00000512340	GDF10	P55107	478 aa		7.41	□□□□□ -1.22
NR1I3-231	ENST00000512340	PRAME	P78395	509 aa		7.41	□□□□□ -1.22
NR1I3-231	ENST00000512340	DHX34	Q14147	1143 aa	Known RBP	7.41	□□□□□ -1.22
NR1I3-231	ENST00000512340	NR0B2	Q15466	257 aa		7.41	□□□□□ -1.22
NR1I3-231	ENST00000512340	TPSAB1	Q15661	275 aa		7.41	□□□□□ -1.22
NR1I3-231	ENST00000512340	CYP1B1	Q16678	543 aa		7.41	□□□□□ -1.22

Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms