RNA–Protein interactions for RNA: ENST00000511739.1

USP38-203, Transcript of ubiquitin specific peptidase 38, humanhuman

TSL 2

Gene USP38, Length 6,376 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP38-203ENST00000511739 DGCR6LQ9BY27 220 aa5.76□□□□□ -1.49
USP38-203ENST00000511739 LEF1Q9UJU2 399 aaPredicted RBP5.76□□□□□ -1.49
USP38-203ENST00000511739 CLDN11O75508 207 aa5.76□□□□□ -1.49
USP38-203ENST00000511739 TRAPPC6AO75865 159 aa5.76□□□□□ -1.49
USP38-203ENST00000511739 GJB1P08034 283 aa5.76□□□□□ -1.49
USP38-203ENST00000511739 AHCYP23526 432 aa5.76□□□□□ -1.49
USP38-203ENST00000511739 SEC24CP53992 1094 aa5.76□□□□□ -1.49
USP38-203ENST00000511739 HSDL1Q3SXM5 330 aa5.76□□□□□ -1.49
USP38-203ENST00000511739 FAM153CQ494X1 144 aa5.76□□□□□ -1.49
USP38-203ENST00000511739 PYDC2Q56P42 97 aa5.76□□□□□ -1.49
USP38-203ENST00000511739 MLIPQ5VWP3 458 aa5.76□□□□□ -1.49
USP38-203ENST00000511739 TXNDC11Q6PKC3 985 aa5.76□□□□□ -1.49
USP38-203ENST00000511739 CATSPERGQ6ZRH7 1159 aa5.76□□□□□ -1.49
USP38-203ENST00000511739 ARMCX6Q7L4S7 300 aa5.76□□□□□ -1.49
USP38-203ENST00000511739 PIGZQ86VD9 579 aa5.76□□□□□ -1.49
USP38-203ENST00000511739 SNX32Q86XE0 403 aa5.76□□□□□ -1.49
USP38-203ENST00000511739 UBE2J2Q8N2K1 259 aa5.76□□□□□ -1.49
USP38-203ENST00000511739 AADATQ8N5Z0 425 aa5.76□□□□□ -1.49
USP38-203ENST00000511739 XAGE5Q8WWM1 108 aa5.76□□□□□ -1.49
USP38-203ENST00000511739 LINGO1Q96FE5 620 aa5.76□□□□□ -1.49
USP38-203ENST00000511739 COX4I2Q96KJ9 171 aa5.76□□□□□ -1.49
USP38-203ENST00000511739 USB1Q9BQ65 265 aaKnown RBP5.76□□□□□ -1.49
USP38-203ENST00000511739 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP5.76□□□□□ -1.49
USP38-203ENST00000511739 NOL6Q9H6R4 1146 aaKnown RBP5.76□□□□□ -1.49
USP38-203ENST00000511739 RHBDL2Q9NX52 303 aa5.76□□□□□ -1.49
USP38-203ENST00000511739 ZNF222Q9UK12 451 aa5.76□□□□□ -1.49
USP38-203ENST00000511739 ATXN2Q99700 1313 aaKnown RBP5.76□□□□□ -1.49
USP38-203ENST00000511739 TRIM38O00635 465 aa5.76□□□□□ -1.49
USP38-203ENST00000511739 MTHFD1P11586 935 aaKnown RBP5.76□□□□□ -1.49
USP38-203ENST00000511739 TFEBP19484 476 aa5.76□□□□□ -1.49
USP38-203ENST00000511739 ARRB1P49407 418 aaPredicted RBP5.76□□□□□ -1.49
USP38-203ENST00000511739 PTPN5P54829 565 aa5.76□□□□□ -1.49
USP38-203ENST00000511739 FPGSQ05932 587 aa5.76□□□□□ -1.49
USP38-203ENST00000511739 CDK18Q07002 472 aa5.76□□□□□ -1.49
USP38-203ENST00000511739 FCHO2Q0JRZ9 810 aa5.76□□□□□ -1.49
USP38-203ENST00000511739 PRKG2Q13237 762 aa5.76□□□□□ -1.49
USP38-203ENST00000511739 TOP3AQ13472 1001 aaPredicted RBP5.76□□□□□ -1.49
USP38-203ENST00000511739 TLR1Q15399 786 aa5.76□□□□□ -1.49
USP38-203ENST00000511739 RFX4Q33E94 735 aa5.76□□□□□ -1.49
USP38-203ENST00000511739 SLC9B1Q4ZJI4 515 aa5.76□□□□□ -1.49
USP38-203ENST00000511739 SLC8B1Q6J4K2 584 aa5.76□□□□□ -1.49
USP38-203ENST00000511739 FIP1L1Q6UN15 594 aaKnown RBP5.76□□□□□ -1.49
USP38-203ENST00000511739 CFAP52Q8N1V2 620 aa5.76□□□□□ -1.49
USP38-203ENST00000511739 LNX2Q8N448 690 aa5.76□□□□□ -1.49
USP38-203ENST00000511739 ZNF433Q8N7K0 673 aaPredicted RBP5.76□□□□□ -1.49
USP38-203ENST00000511739 TMEM145Q8NBT3 493 aa5.76□□□□□ -1.49
USP38-203ENST00000511739 VANGL1Q8TAA9 524 aaPredicted RBP5.76□□□□□ -1.49
USP38-203ENST00000511739 ZNF398Q8TD17 642 aa5.76□□□□□ -1.49
USP38-203ENST00000511739 BRSK1Q8TDC3 778 aa5.76□□□□□ -1.49
USP38-203ENST00000511739 COQ8BQ96D53 544 aa5.76□□□□□ -1.49
USP38-203ENST00000511739 DUSP9Q99956 384 aaKnown RBP5.76□□□□□ -1.49
USP38-203ENST00000511739 STRADBQ9C0K7 418 aa5.76□□□□□ -1.49
USP38-203ENST00000511739 DNAJC28Q9NX36 388 aa5.76□□□□□ -1.49
USP38-203ENST00000511739 PTCH2Q9Y6C5 1203 aa5.76□□□□□ -1.49
USP38-203ENST00000511739 CA12O43570 354 aa5.75□□□□□ -1.49
USP38-203ENST00000511739 SEMA3DO95025 777 aa5.75□□□□□ -1.49
USP38-203ENST00000511739 SNHG28P0DPA3 235 aa5.75□□□□□ -1.49
USP38-203ENST00000511739 BRCC3P46736 316 aa5.75□□□□□ -1.49
USP38-203ENST00000511739 CCR3P51677 355 aa5.75□□□□□ -1.49
USP38-203ENST00000511739 GMFBP60983 142 aa5.75□□□□□ -1.49
USP38-203ENST00000511739 TUSC3Q13454 348 aa5.75□□□□□ -1.49
USP38-203ENST00000511739 PPP1R26Q5T8A7 1209 aaPredicted RBP5.75□□□□□ -1.49
USP38-203ENST00000511739 SLC24A5Q71RS6 500 aa5.75□□□□□ -1.49
USP38-203ENST00000511739 TAS1R3Q7RTX0 852 aa5.75□□□□□ -1.49
USP38-203ENST00000511739 APLFQ8IW19 511 aaPredicted RBP5.75□□□□□ -1.49
USP38-203ENST00000511739 KIAA0895Q8NCT3 520 aa5.75□□□□□ -1.49
USP38-203ENST00000511739 SLC22A17Q8WUG5 538 aa5.75□□□□□ -1.49
USP38-203ENST00000511739 SLC5A5Q92911 643 aa5.75□□□□□ -1.49
USP38-203ENST00000511739 BLOC1S4Q9NUP1 217 aa5.75□□□□□ -1.49
USP38-203ENST00000511739 SEC14L3Q9UDX4 400 aa5.75□□□□□ -1.49
USP38-203ENST00000511739 POU2F3Q9UKI9 436 aa5.75□□□□□ -1.49
USP38-203ENST00000511739 MED31Q9Y3C7 131 aa5.75□□□□□ -1.49
USP38-203ENST00000511739 ASTN2O75129 1339 aaPredicted RBP5.75□□□□□ -1.49
USP38-203ENST00000511739 PSMD11O00231 422 aa5.75□□□□□ -1.49
USP38-203ENST00000511739 KPNA4O00629 521 aaPredicted RBP5.75□□□□□ -1.49
USP38-203ENST00000511739 AKAP3O75969 853 aa5.75□□□□□ -1.49
USP38-203ENST00000511739 C1RP00736 705 aa5.75□□□□□ -1.49
USP38-203ENST00000511739 FGF1P05230 155 aa5.75□□□□□ -1.49
USP38-203ENST00000511739 TAL1P17542 331 aaPredicted RBP5.75□□□□□ -1.49
USP38-203ENST00000511739 CORO1AP31146 461 aaKnown RBP5.75□□□□□ -1.49
USP38-203ENST00000511739 RPL14P50914 215 aaKnown RBP5.75□□□□□ -1.49
USP38-203ENST00000511739 ACLYP53396 1101 aa5.75□□□□□ -1.49
USP38-203ENST00000511739 CEBPGP53567 150 aa5.75□□□□□ -1.49
USP38-203ENST00000511739 PRMT2P55345 433 aa5.75□□□□□ -1.49
USP38-203ENST00000511739 GCNT1Q02742 428 aa5.75□□□□□ -1.49
USP38-203ENST00000511739 CYP4F3Q08477 520 aa5.75□□□□□ -1.49
USP38-203ENST00000511739 TRMT5Q32P41 509 aaKnown RBP5.75□□□□□ -1.49
USP38-203ENST00000511739 CWF19L1Q69YN2 538 aaKnown RBP5.75□□□□□ -1.49
USP38-203ENST00000511739 SCIMPQ6UWF3 145 aa5.75□□□□□ -1.49
USP38-203ENST00000511739 FRRS1Q6ZNA5 592 aa5.75□□□□□ -1.49
USP38-203ENST00000511739 ADGRG6Q86SQ4 1221 aa5.75□□□□□ -1.49
USP38-203ENST00000511739 CFAP206Q8IYR0 622 aa5.75□□□□□ -1.49
USP38-203ENST00000511739 BPIFB6Q8NFQ5 453 aa5.75□□□□□ -1.49
USP38-203ENST00000511739 OR4L1Q8NH43 312 aa5.75□□□□□ -1.49
USP38-203ENST00000511739 C1orf216Q8TAB5 229 aa5.75□□□□□ -1.49
USP38-203ENST00000511739 RELTQ969Z4 430 aa5.75□□□□□ -1.49
USP38-203ENST00000511739 NDNQ99608 321 aa5.75□□□□□ -1.49
USP38-203ENST00000511739 GPR20Q99678 358 aa5.75□□□□□ -1.49
USP38-203ENST00000511739 TBC1D10AQ9BXI6 508 aa5.75□□□□□ -1.49
USP38-203ENST00000511739 TMEM134Q9H6X4 195 aa5.75□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms