RNA–Protein interactions for RNA: ENST00000511667.5

CLDND1-224, Transcript of claudin domain containing 1, humanhuman

TSL 3

Gene CLDND1, Length 871 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDND1-224ENST00000511667 XRCC4Q13426 336 aa13.39□□□□□ -0.27
CLDND1-224ENST00000511667 SPA17Q15506 151 aa13.39□□□□□ -0.27
CLDND1-224ENST00000511667 C14orf28Q4W4Y0 310 aa13.39□□□□□ -0.27
CLDND1-224ENST00000511667 PYCR3Q53H96 274 aa13.39□□□□□ -0.27
CLDND1-224ENST00000511667 FAM182AQ5T1J6 154 aa13.39□□□□□ -0.27
CLDND1-224ENST00000511667 RAET1GQ6H3X3 334 aa13.39□□□□□ -0.27
CLDND1-224ENST00000511667 KDELC1Q6UW63 502 aa13.39□□□□□ -0.27
CLDND1-224ENST00000511667 RBM44Q6ZP01 1051 aaKnown RBP13.39□□□□□ -0.27
CLDND1-224ENST00000511667 KLHDC8BQ8IXV7 354 aa13.39□□□□□ -0.27
CLDND1-224ENST00000511667 LPCAT1Q8NF37 534 aa13.39□□□□□ -0.27
CLDND1-224ENST00000511667 DTX3LQ8TDB6 740 aa13.39□□□□□ -0.27
CLDND1-224ENST00000511667 CCDC74AQ96AQ1 378 aa13.39□□□□□ -0.27
CLDND1-224ENST00000511667 LIN37Q96GY3 246 aaPredicted RBP13.39□□□□□ -0.27
CLDND1-224ENST00000511667 QKIQ96PU8 341 aaKnown RBP eCLIP13.39□□□□□ -0.273e-7■■□□□ 11.5
CLDND1-224ENST00000511667 VAT1Q99536 393 aa13.39□□□□□ -0.27
CLDND1-224ENST00000511667 RIOK2Q9BVS4 552 aaKnown RBP13.39□□□□□ -0.27
CLDND1-224ENST00000511667 ADGRE3Q9BY15 652 aa13.39□□□□□ -0.27
CLDND1-224ENST00000511667 CEP41Q9BYV8 373 aa13.39□□□□□ -0.27
CLDND1-224ENST00000511667 CDH19Q9H159 772 aa13.39□□□□□ -0.27
CLDND1-224ENST00000511667 ABCG4Q9H172 646 aa13.39□□□□□ -0.27
CLDND1-224ENST00000511667 CARS2Q9HA77 564 aaKnown RBP13.39□□□□□ -0.27
CLDND1-224ENST00000511667 CD84Q9UIB8 345 aa13.39□□□□□ -0.27
CLDND1-224ENST00000511667 PCYT1BQ9Y5K3 369 aaPredicted RBP13.39□□□□□ -0.27
CLDND1-224ENST00000511667 ADGRG1Q9Y653 693 aa13.39□□□□□ -0.27
CLDND1-224ENST00000511667 C1orf232A0A0U1RR37 186 aa13.38□□□□□ -0.27
CLDND1-224ENST00000511667 ENO4A6NNW6 628 aa13.38□□□□□ -0.27
CLDND1-224ENST00000511667 FADS2P1A8MWK0 482 aa13.38□□□□□ -0.27
CLDND1-224ENST00000511667 CDRT15L2A8MXV6 281 aa13.38□□□□□ -0.27
CLDND1-224ENST00000511667 HACD1B0YJ81 288 aa13.38□□□□□ -0.27
CLDND1-224ENST00000511667 D6RAR5 112 aa13.38□□□□□ -0.27
CLDND1-224ENST00000511667 APOC4-APOC2K7ER74 178 aa13.38□□□□□ -0.27
CLDND1-224ENST00000511667 MTSS1O43312 755 aa13.38□□□□□ -0.27
CLDND1-224ENST00000511667 USP12O75317 370 aa13.38□□□□□ -0.27
CLDND1-224ENST00000511667 MT-CYBP00156 380 aaPredicted RBP13.38□□□□□ -0.27
CLDND1-224ENST00000511667 APOC2P02655 101 aa13.38□□□□□ -0.27
CLDND1-224ENST00000511667 CCKBRP32239 447 aa13.38□□□□□ -0.27
CLDND1-224ENST00000511667 MLLT3P42568 568 aaPredicted RBP13.38□□□□□ -0.27
CLDND1-224ENST00000511667 GPR1P46091 355 aa13.38□□□□□ -0.27
CLDND1-224ENST00000511667 VAV2P52735 878 aa13.38□□□□□ -0.27
CLDND1-224ENST00000511667 EPHB1P54762 984 aa13.38□□□□□ -0.27
CLDND1-224ENST00000511667 DYNLT1P63172 113 aa13.38□□□□□ -0.27
CLDND1-224ENST00000511667 CTBSQ01459 385 aa13.38□□□□□ -0.27
CLDND1-224ENST00000511667 CDK18Q07002 472 aa13.38□□□□□ -0.27
CLDND1-224ENST00000511667 ZFP36L1Q07352 338 aaKnown RBP13.38□□□□□ -0.27
CLDND1-224ENST00000511667 NFATC3Q12968 1075 aa13.38□□□□□ -0.27
CLDND1-224ENST00000511667 SQSTM1Q13501 440 aa13.38□□□□□ -0.27
CLDND1-224ENST00000511667 ZFYVE27Q5T4F4 411 aa13.38□□□□□ -0.27
CLDND1-224ENST00000511667 DENND2CQ68D51 928 aa13.38□□□□□ -0.27
CLDND1-224ENST00000511667 LYSMD3Q7Z3D4 306 aa13.38□□□□□ -0.27
CLDND1-224ENST00000511667 SPRED1Q7Z699 444 aa13.38□□□□□ -0.27
CLDND1-224ENST00000511667 TAF8Q7Z7C8 310 aa13.38□□□□□ -0.27
CLDND1-224ENST00000511667 LSMEM2Q8N112 164 aa13.38□□□□□ -0.27
CLDND1-224ENST00000511667 PAF1Q8N7H5 531 aa13.38□□□□□ -0.27
CLDND1-224ENST00000511667 FAM46DQ8NEK8 389 aa13.38□□□□□ -0.27
CLDND1-224ENST00000511667 SPATA22Q8NHS9 363 aa13.38□□□□□ -0.27
CLDND1-224ENST00000511667 TFB1MQ8WVM0 346 aaKnown RBP13.38□□□□□ -0.27
CLDND1-224ENST00000511667 ATXN7L3BQ96GX2 97 aa13.38□□□□□ -0.27
CLDND1-224ENST00000511667 RBM41Q96IZ5 413 aaKnown RBP13.38□□□□□ -0.27
CLDND1-224ENST00000511667 ZNF578Q96N58 590 aaPredicted RBP13.38□□□□□ -0.27
CLDND1-224ENST00000511667 AGAP3Q96P47 875 aa13.38□□□□□ -0.27
CLDND1-224ENST00000511667 FCRL5Q96RD9 977 aa13.38□□□□□ -0.27
CLDND1-224ENST00000511667 GORASP1Q9BQQ3 440 aa13.38□□□□□ -0.27
CLDND1-224ENST00000511667 GSDMCQ9BYG8 508 aa13.38□□□□□ -0.27
CLDND1-224ENST00000511667 LUC7LQ9NQ29 371 aaKnown RBP13.38□□□□□ -0.27
CLDND1-224ENST00000511667 TAAR2Q9P1P5 351 aa13.38□□□□□ -0.27
CLDND1-224ENST00000511667 TTLL3Q9Y4R7 772 aa13.38□□□□□ -0.27
CLDND1-224ENST00000511667 OAS3Q9Y6K5 1087 aaKnown RBP13.38□□□□□ -0.27
CLDND1-224ENST00000511667 RNF215Q9Y6U7 377 aa13.38□□□□□ -0.27
CLDND1-224ENST00000511667 A6NCN8 305 aa13.37□□□□□ -0.27
CLDND1-224ENST00000511667 NDST3O95803 873 aa13.37□□□□□ -0.27
CLDND1-224ENST00000511667 CCL7P80098 99 aa13.37□□□□□ -0.27
CLDND1-224ENST00000511667 LRP8Q14114 963 aa13.37□□□□□ -0.27
CLDND1-224ENST00000511667 NOMO1Q15155 1222 aa13.37□□□□□ -0.27
CLDND1-224ENST00000511667 CLPPQ16740 277 aaPredicted RBP13.37□□□□□ -0.27
CLDND1-224ENST00000511667 PDPK2PQ6A1A2 396 aa13.37□□□□□ -0.27
CLDND1-224ENST00000511667 ATG14Q6ZNE5 492 aa13.37□□□□□ -0.27
CLDND1-224ENST00000511667 B4GALNT4Q76KP1 1039 aa13.37□□□□□ -0.27
CLDND1-224ENST00000511667 CLEC14AQ86T13 490 aa13.37□□□□□ -0.27
CLDND1-224ENST00000511667 DAAM2Q86T65 1068 aa13.37□□□□□ -0.27
CLDND1-224ENST00000511667 NAGSQ8N159 534 aa13.37□□□□□ -0.27
CLDND1-224ENST00000511667 ZNF567Q8N184 647 aa13.37□□□□□ -0.27
CLDND1-224ENST00000511667 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP13.37□□□□□ -0.27
CLDND1-224ENST00000511667 GPR26Q8NDV2 337 aa13.37□□□□□ -0.27
CLDND1-224ENST00000511667 KCNE4Q8WWG9 221 aa13.37□□□□□ -0.27
CLDND1-224ENST00000511667 ALG3Q92685 438 aa13.37□□□□□ -0.27
CLDND1-224ENST00000511667 P3H4Q92791 437 aa13.37□□□□□ -0.27
CLDND1-224ENST00000511667 OXNAD1Q96HP4 312 aaPredicted RBP13.37□□□□□ -0.27
CLDND1-224ENST00000511667 MRGPRX2Q96LB1 330 aa13.37□□□□□ -0.27
CLDND1-224ENST00000511667 SLC46A1Q96NT5 459 aa13.37□□□□□ -0.27
CLDND1-224ENST00000511667 LRRN3Q9H3W5 708 aa13.37□□□□□ -0.27
CLDND1-224ENST00000511667 FAM83DQ9H4H8 585 aa13.37□□□□□ -0.27
CLDND1-224ENST00000511667 ZFYVE1Q9HBF4 777 aa13.37□□□□□ -0.27
CLDND1-224ENST00000511667 SIRPGQ9P1W8 387 aa13.37□□□□□ -0.27
CLDND1-224ENST00000511667 IMPACTQ9P2X3 320 aa13.37□□□□□ -0.27
CLDND1-224ENST00000511667 GULP1Q9UBP9 304 aa13.37□□□□□ -0.27
CLDND1-224ENST00000511667 DOLKQ9UPQ8 538 aa13.37□□□□□ -0.27
CLDND1-224ENST00000511667 TMEM98Q9Y2Y6 226 aa13.37□□□□□ -0.27
CLDND1-224ENST00000511667 SPO11Q9Y5K1 396 aa13.37□□□□□ -0.27
CLDND1-224ENST00000511667 DOPEY1Q5JWR5 2465 aa13.36□□□□□ -0.27
CLDND1-224ENST00000511667 CCDC66A2RUB6 948 aa13.36□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms