RNA–Protein interactions for RNA: ENST00000511604.5

CPNE4-208, Transcript of copine 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CPNE4, Length 2,503 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE4-208ENST00000511604 KPNA5O15131 536 aa7.3□□□□□ -1.24
CPNE4-208ENST00000511604 GREM1O60565 184 aa7.3□□□□□ -1.24
CPNE4-208ENST00000511604 STAU1O95793 577 aaKnown RBP7.3□□□□□ -1.24
CPNE4-208ENST00000511604 NR3C2P08235 984 aa7.3□□□□□ -1.24
CPNE4-208ENST00000511604 IL7RP16871 459 aa7.3□□□□□ -1.24
CPNE4-208ENST00000511604 PCMT1P22061 227 aa7.3□□□□□ -1.24
CPNE4-208ENST00000511604 MAOBP27338 520 aa7.3□□□□□ -1.24
CPNE4-208ENST00000511604 ZNF273Q14593 569 aa7.3□□□□□ -1.24
CPNE4-208ENST00000511604 LTB4RQ15722 352 aa7.3□□□□□ -1.24
CPNE4-208ENST00000511604 ZNF124Q15973 351 aa7.3□□□□□ -1.24
CPNE4-208ENST00000511604 BTBD16Q32M84 506 aa7.3□□□□□ -1.24
CPNE4-208ENST00000511604 BRDTQ58F21 947 aaPredicted RBP7.3□□□□□ -1.24
CPNE4-208ENST00000511604 VARS2Q5ST30 1063 aaKnown RBP7.3□□□□□ -1.24
CPNE4-208ENST00000511604 TNS2Q63HR2 1409 aa7.3□□□□□ -1.24
CPNE4-208ENST00000511604 FCRLBQ6BAA4 426 aa7.3□□□□□ -1.24
CPNE4-208ENST00000511604 LRRC8EQ6NSJ5 796 aa7.3□□□□□ -1.24
CPNE4-208ENST00000511604 USP50Q70EL3 339 aaPredicted RBP7.3□□□□□ -1.24
CPNE4-208ENST00000511604 KRT77Q7Z794 578 aa7.3□□□□□ -1.24
CPNE4-208ENST00000511604 CMTR2Q8IYT2 770 aaKnown RBP7.3□□□□□ -1.24
CPNE4-208ENST00000511604 TNS4Q8IZW8 715 aa7.3□□□□□ -1.24
CPNE4-208ENST00000511604 TEX47Q8TBZ9 253 aa7.3□□□□□ -1.24
CPNE4-208ENST00000511604 SLC22A17Q8WUG5 538 aa7.3□□□□□ -1.24
CPNE4-208ENST00000511604 RSAD2Q8WXG1 361 aa7.3□□□□□ -1.24
CPNE4-208ENST00000511604 ST8SIA4Q92187 359 aa7.3□□□□□ -1.24
CPNE4-208ENST00000511604 UFD1Q92890 307 aa7.3□□□□□ -1.24
CPNE4-208ENST00000511604 NCLNQ969V3 563 aa7.3□□□□□ -1.24
CPNE4-208ENST00000511604 SLC47A1Q96FL8 570 aa7.3□□□□□ -1.24
CPNE4-208ENST00000511604 FOPNLQ96NB1 174 aa7.3□□□□□ -1.24
CPNE4-208ENST00000511604 GAD1Q99259 594 aa7.3□□□□□ -1.24
CPNE4-208ENST00000511604 ZNF416Q9BWM5 594 aa7.3□□□□□ -1.24
CPNE4-208ENST00000511604 NUAK2Q9H093 628 aa7.3□□□□□ -1.24
CPNE4-208ENST00000511604 ABCG4Q9H172 646 aa7.3□□□□□ -1.24
CPNE4-208ENST00000511604 SAV1Q9H4B6 383 aaPredicted RBP7.3□□□□□ -1.24
CPNE4-208ENST00000511604 HPS4Q9NQG7 708 aa7.3□□□□□ -1.24
CPNE4-208ENST00000511604 ENTPD7Q9NQZ7 604 aa7.3□□□□□ -1.24
CPNE4-208ENST00000511604 PIH1D1Q9NWS0 290 aaKnown RBP7.3□□□□□ -1.24
CPNE4-208ENST00000511604 TMOD3Q9NYL9 352 aa7.3□□□□□ -1.24
CPNE4-208ENST00000511604 SLC23A1Q9UHI7 598 aa7.3□□□□□ -1.24
CPNE4-208ENST00000511604 NUFIP1Q9UHK0 495 aaKnown RBP7.3□□□□□ -1.24
CPNE4-208ENST00000511604 COPS3Q9UNS2 423 aa7.3□□□□□ -1.24
CPNE4-208ENST00000511604 OR6C65A6NJZ3 312 aa7.29□□□□□ -1.24
CPNE4-208ENST00000511604 EIF3DO15371 548 aaKnown RBP eCLIP7.29□□□□□ -1.24
CPNE4-208ENST00000511604 SLC22A5O76082 557 aa7.29□□□□□ -1.24
CPNE4-208ENST00000511604 SNX4O95219 450 aa7.29□□□□□ -1.24
CPNE4-208ENST00000511604 STARD3NLO95772 234 aa7.29□□□□□ -1.24
CPNE4-208ENST00000511604 POU2F1P14859 743 aa7.29□□□□□ -1.24
CPNE4-208ENST00000511604 ZNF3P17036 446 aa7.29□□□□□ -1.24
CPNE4-208ENST00000511604 RAB3AP20336 220 aa7.29□□□□□ -1.24
CPNE4-208ENST00000511604 ATP6V1B2P21281 511 aa7.29□□□□□ -1.24
CPNE4-208ENST00000511604 TGM2P21980 687 aa7.29□□□□□ -1.24
CPNE4-208ENST00000511604 CYP3A7P24462 503 aa7.29□□□□□ -1.24
CPNE4-208ENST00000511604 IL1R2P27930 398 aa7.29□□□□□ -1.24
CPNE4-208ENST00000511604 CDKN2BP42772 138 aa7.29□□□□□ -1.24
CPNE4-208ENST00000511604 HOXA1P49639 335 aaPredicted RBP7.29□□□□□ -1.24
CPNE4-208ENST00000511604 CPT1AP50416 773 aa7.29□□□□□ -1.24
CPNE4-208ENST00000511604 WNT7BP56706 349 aa7.29□□□□□ -1.24
CPNE4-208ENST00000511604 GABARAPL2P60520 117 aa7.29□□□□□ -1.24
CPNE4-208ENST00000511604 YBX1P67809 324 aaKnown RBP7.29□□□□□ -1.24
CPNE4-208ENST00000511604 RGS1Q08116 209 aa7.29□□□□□ -1.24
CPNE4-208ENST00000511604 PITRM1Q5JRX3 1037 aa7.29□□□□□ -1.24
CPNE4-208ENST00000511604 PIK3R6Q5UE93 754 aa7.29□□□□□ -1.24
CPNE4-208ENST00000511604 ALKBH2Q6NS38 261 aa7.29□□□□□ -1.24
CPNE4-208ENST00000511604 TXNDC11Q6PKC3 985 aa7.29□□□□□ -1.24
CPNE4-208ENST00000511604 C16orf62Q7Z3J2 963 aa7.29□□□□□ -1.24
CPNE4-208ENST00000511604 GPAT4Q86UL3 456 aa7.29□□□□□ -1.24
CPNE4-208ENST00000511604 PLD3Q8IV08 490 aa7.29□□□□□ -1.24
CPNE4-208ENST00000511604 RASGRP3Q8IV61 690 aa7.29□□□□□ -1.24
CPNE4-208ENST00000511604 KCT2Q8NC54 265 aa7.29□□□□□ -1.24
CPNE4-208ENST00000511604 OR10T2Q8NGX3 314 aa7.29□□□□□ -1.24
CPNE4-208ENST00000511604 OR8K5Q8NH50 307 aa7.29□□□□□ -1.24
CPNE4-208ENST00000511604 SYTL5Q8TDW5 730 aaPredicted RBP7.29□□□□□ -1.24
CPNE4-208ENST00000511604 RIT1Q92963 219 aa7.29□□□□□ -1.24
CPNE4-208ENST00000511604 PHF21AQ96BD5 680 aa7.29□□□□□ -1.24
CPNE4-208ENST00000511604 MAGEB10Q96LZ2 347 aaPredicted RBP7.29□□□□□ -1.24
CPNE4-208ENST00000511604 NECTIN4Q96NY8 510 aa7.29□□□□□ -1.24
CPNE4-208ENST00000511604 NEDD4LQ96PU5 975 aa7.29□□□□□ -1.24
CPNE4-208ENST00000511604 CPXM1Q96SM3 734 aa7.29□□□□□ -1.24
CPNE4-208ENST00000511604 TTPALQ9BTX7 342 aa7.29□□□□□ -1.24
CPNE4-208ENST00000511604 KIFC3Q9BVG8 833 aa7.29□□□□□ -1.24
CPNE4-208ENST00000511604 C6orf62Q9GZU0 229 aaPredicted RBP7.29□□□□□ -1.24
CPNE4-208ENST00000511604 SLC6A15Q9H2J7 730 aa7.29□□□□□ -1.24
CPNE4-208ENST00000511604 MRM3Q9HC36 420 aaKnown RBP7.29□□□□□ -1.24
CPNE4-208ENST00000511604 SPAG4Q9NPE6 437 aa7.29□□□□□ -1.24
CPNE4-208ENST00000511604 TMEM39AQ9NV64 488 aa7.29□□□□□ -1.24
CPNE4-208ENST00000511604 TBC1D13Q9NVG8 400 aa7.29□□□□□ -1.24
CPNE4-208ENST00000511604 DPP3Q9NY33 737 aa7.29□□□□□ -1.24
CPNE4-208ENST00000511604 HSPBP1Q9NZL4 362 aa7.29□□□□□ -1.24
CPNE4-208ENST00000511604 EHD3Q9NZN3 535 aa7.29□□□□□ -1.24
CPNE4-208ENST00000511604 CD300AQ9UGN4 299 aa7.29□□□□□ -1.24
CPNE4-208ENST00000511604 PDE10AQ9Y233 779 aa7.29□□□□□ -1.24
CPNE4-208ENST00000511604 SLC45A1Q9Y2W3 748 aa7.29□□□□□ -1.24
CPNE4-208ENST00000511604 PCDHGB6Q9Y5F9 930 aa7.29□□□□□ -1.24
CPNE4-208ENST00000511604 DHRS12A0PJE2 317 aa7.29□□□□□ -1.24
CPNE4-208ENST00000511604 C3orf70A6NLC5 250 aaPredicted RBP7.29□□□□□ -1.24
CPNE4-208ENST00000511604 GMDSO60547 372 aa7.29□□□□□ -1.24
CPNE4-208ENST00000511604 GLRA3O75311 464 aa7.29□□□□□ -1.24
CPNE4-208ENST00000511604 HSPA4LO95757 839 aa7.29□□□□□ -1.24
CPNE4-208ENST00000511604 ADORA3P0DMS8 318 aa7.29□□□□□ -1.24
CPNE4-208ENST00000511604 TFE3P19532 575 aaPredicted RBP7.29□□□□□ -1.24
CPNE4-208ENST00000511604 PRKCHP24723 683 aa7.29□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 46.9 ms