RNA–Protein interactions for RNA: ENST00000511586.5

PDLIM5-215, Transcript of PDZ and LIM domain 5, humanhuman

TSL 4

Gene PDLIM5, Length 547 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-215ENST00000511586 PPP1R21Q6ZMI0 780 aa7.1□□□□□ -1.27
PDLIM5-215ENST00000511586 PRUNE1Q86TP1 453 aa7.1□□□□□ -1.27
PDLIM5-215ENST00000511586 TRIM74Q86UV6 250 aa7.1□□□□□ -1.27
PDLIM5-215ENST00000511586 GKN2Q86XP6 184 aa7.1□□□□□ -1.27
PDLIM5-215ENST00000511586 DNAAF3Q8N9W5 541 aa7.1□□□□□ -1.27
PDLIM5-215ENST00000511586 FAM181AQ8N9Y4 354 aa7.1□□□□□ -1.27
PDLIM5-215ENST00000511586 GLIS1Q8NBF1 620 aa7.1□□□□□ -1.27
PDLIM5-215ENST00000511586 MNS1Q8NEH6 495 aa7.1□□□□□ -1.27
PDLIM5-215ENST00000511586 OR4K2Q8NGD2 314 aa7.1□□□□□ -1.27
PDLIM5-215ENST00000511586 DTX3LQ8TDB6 740 aa7.1□□□□□ -1.27
PDLIM5-215ENST00000511586 GLMNQ92990 594 aa7.1□□□□□ -1.27
PDLIM5-215ENST00000511586 GLYATL1Q969I3 302 aa7.1□□□□□ -1.27
PDLIM5-215ENST00000511586 SCARF2Q96GP6 870 aaPredicted RBP7.1□□□□□ -1.27
PDLIM5-215ENST00000511586 C19orf43Q9BQ61 176 aa7.1□□□□□ -1.27
PDLIM5-215ENST00000511586 CLPBQ9H078 707 aa7.1□□□□□ -1.27
PDLIM5-215ENST00000511586 RMI1Q9H9A7 625 aa7.1□□□□□ -1.27
PDLIM5-215ENST00000511586 CARS2Q9HA77 564 aaKnown RBP7.1□□□□□ -1.27
PDLIM5-215ENST00000511586 TRIM39Q9HCM9 518 aa7.1□□□□□ -1.27
PDLIM5-215ENST00000511586 IL26Q9NPH9 171 aa7.1□□□□□ -1.27
PDLIM5-215ENST00000511586 EVA1BQ9NVM1 165 aa7.1□□□□□ -1.27
PDLIM5-215ENST00000511586 TRNAU1APQ9NX07 287 aaKnown RBP7.1□□□□□ -1.27
PDLIM5-215ENST00000511586 NCKIPSDQ9NZQ3 722 aa7.1□□□□□ -1.27
PDLIM5-215ENST00000511586 VPS18Q9P253 973 aa7.1□□□□□ -1.27
PDLIM5-215ENST00000511586 SUFUQ9UMX1 484 aa7.1□□□□□ -1.27
PDLIM5-215ENST00000511586 TMEM98Q9Y2Y6 226 aa7.1□□□□□ -1.27
PDLIM5-215ENST00000511586 ARL5AQ9Y689 179 aa7.1□□□□□ -1.27
PDLIM5-215ENST00000511586 SAR1BQ9Y6B6 198 aa7.1□□□□□ -1.27
PDLIM5-215ENST00000511586 CABIN1Q9Y6J0 2220 aa7.1□□□□□ -1.27
PDLIM5-215ENST00000511586 TMEM131Q92545 1883 aa7.1□□□□□ -1.27
PDLIM5-215ENST00000511586 DCHS1Q96JQ0 3298 aa7.1□□□□□ -1.27
PDLIM5-215ENST00000511586 DNAH14Q0VDD8 3507 aa7.09□□□□□ -1.27
PDLIM5-215ENST00000511586 GLYATL1P3A0A0U1RQE8 302 aa7.09□□□□□ -1.27
PDLIM5-215ENST00000511586 AP3B1O00203 1094 aa7.09□□□□□ -1.27
PDLIM5-215ENST00000511586 DYNC1I1O14576 645 aa7.09□□□□□ -1.27
PDLIM5-215ENST00000511586 LDB2O43679 373 aa7.09□□□□□ -1.27
PDLIM5-215ENST00000511586 BUD23O43709 281 aaKnown RBP7.09□□□□□ -1.27
PDLIM5-215ENST00000511586 VEGFDO43915 354 aa7.09□□□□□ -1.27
PDLIM5-215ENST00000511586 PHF2O75151 1096 aa7.09□□□□□ -1.27
PDLIM5-215ENST00000511586 TRIM16O95361 564 aa7.09□□□□□ -1.27
PDLIM5-215ENST00000511586 SLU7O95391 586 aaKnown RBP7.09□□□□□ -1.27
PDLIM5-215ENST00000511586 KRT14P02533 472 aa7.09□□□□□ -1.27
PDLIM5-215ENST00000511586 FUCA1P04066 466 aa7.09□□□□□ -1.27
PDLIM5-215ENST00000511586 CELA2BP08218 269 aaPredicted RBP7.09□□□□□ -1.27
PDLIM5-215ENST00000511586 ADRB1P08588 477 aa7.09□□□□□ -1.27
PDLIM5-215ENST00000511586 FTH1P19P0C7X4 201 aa7.09□□□□□ -1.27
PDLIM5-215ENST00000511586 CDK4P11802 303 aa7.09□□□□□ -1.27
PDLIM5-215ENST00000511586 CKMT1AP12532 417 aa7.09□□□□□ -1.27
PDLIM5-215ENST00000511586 TPH1P17752 444 aa7.09□□□□□ -1.27
PDLIM5-215ENST00000511586 ADCY8P40145 1251 aa7.09□□□□□ -1.27
PDLIM5-215ENST00000511586 HADHAP40939 763 aa7.09□□□□□ -1.27
PDLIM5-215ENST00000511586 PAFAH1B1P43034 410 aa7.09□□□□□ -1.27
PDLIM5-215ENST00000511586 RPIAP49247 311 aa7.09□□□□□ -1.27
PDLIM5-215ENST00000511586 FNTAP49354 379 aa7.09□□□□□ -1.27
PDLIM5-215ENST00000511586 DUSP3P51452 185 aaPredicted RBP7.09□□□□□ -1.27
PDLIM5-215ENST00000511586 BASP1P80723 227 aaKnown RBP7.09□□□□□ -1.27
PDLIM5-215ENST00000511586 DAB2P98082 770 aa7.09□□□□□ -1.27
PDLIM5-215ENST00000511586 CDK16Q00536 496 aa7.09□□□□□ -1.27
PDLIM5-215ENST00000511586 CDH17Q12864 832 aa7.09□□□□□ -1.27
PDLIM5-215ENST00000511586 ILF3Q12906 894 aaKnown RBP eCLIP7.09□□□□□ -1.27
PDLIM5-215ENST00000511586 PEX6Q13608 980 aa7.09□□□□□ -1.27
PDLIM5-215ENST00000511586 ITGA9Q13797 1035 aa7.09□□□□□ -1.27
PDLIM5-215ENST00000511586 TUBB2AQ13885 445 aa7.09□□□□□ -1.27
PDLIM5-215ENST00000511586 PTPRCAPQ14761 206 aa7.09□□□□□ -1.27
PDLIM5-215ENST00000511586 POU6F1Q14863 301 aa7.09□□□□□ -1.27
PDLIM5-215ENST00000511586 TCEA2Q15560 299 aa7.09□□□□□ -1.27
PDLIM5-215ENST00000511586 TRIP13Q15645 432 aaPredicted RBP7.09□□□□□ -1.27
PDLIM5-215ENST00000511586 CHRNA6Q15825 494 aa7.09□□□□□ -1.27
PDLIM5-215ENST00000511586 PROX2Q3B8N5 592 aa7.09□□□□□ -1.27
PDLIM5-215ENST00000511586 ATP13A5Q4VNC0 1218 aa7.09□□□□□ -1.27
PDLIM5-215ENST00000511586 PYCR3Q53H96 274 aa7.09□□□□□ -1.27
PDLIM5-215ENST00000511586 C6orf132Q5T0Z8 1188 aa7.09□□□□□ -1.27
PDLIM5-215ENST00000511586 CCDC137Q6PK04 289 aaKnown RBP7.09□□□□□ -1.27
PDLIM5-215ENST00000511586 FAM151BQ6UXP7 276 aa7.09□□□□□ -1.27
PDLIM5-215ENST00000511586 MARK2Q7KZI7 788 aaKnown RBP7.09□□□□□ -1.27
PDLIM5-215ENST00000511586 TAF8Q7Z7C8 310 aa7.09□□□□□ -1.27
PDLIM5-215ENST00000511586 SLCO6A1Q86UG4 719 aa7.09□□□□□ -1.27
PDLIM5-215ENST00000511586 GALNT13Q8IUC8 556 aa7.09□□□□□ -1.27
PDLIM5-215ENST00000511586 PHYKPLQ8IUZ5 450 aa7.09□□□□□ -1.27
PDLIM5-215ENST00000511586 OR52K1Q8NGK4 314 aa7.09□□□□□ -1.27
PDLIM5-215ENST00000511586 GPBAR1Q8TDU6 330 aa7.09□□□□□ -1.27
PDLIM5-215ENST00000511586 GRK7Q8WTQ7 553 aa7.09□□□□□ -1.27
PDLIM5-215ENST00000511586 STYXQ8WUJ0 223 aa7.09□□□□□ -1.27
PDLIM5-215ENST00000511586 APOLD1Q96LR9 279 aa7.09□□□□□ -1.27
PDLIM5-215ENST00000511586 VPS35Q96QK1 796 aa7.09□□□□□ -1.27
PDLIM5-215ENST00000511586 TUBB2BQ9BVA1 445 aa7.09□□□□□ -1.27
PDLIM5-215ENST00000511586 GSDMCQ9BYG8 508 aa7.09□□□□□ -1.27
PDLIM5-215ENST00000511586 TMEM168Q9H0V1 697 aa7.09□□□□□ -1.27
PDLIM5-215ENST00000511586 SUDS3Q9H7L9 328 aaPredicted RBP7.09□□□□□ -1.27
PDLIM5-215ENST00000511586 EIF2B3Q9NR50 452 aaKnown RBP7.09□□□□□ -1.27
PDLIM5-215ENST00000511586 TOR4AQ9NXH8 423 aa7.09□□□□□ -1.27
PDLIM5-215ENST00000511586 SMARCAL1Q9NZC9 954 aa7.09□□□□□ -1.27
PDLIM5-215ENST00000511586 RNF14Q9UBS8 474 aa7.09□□□□□ -1.27
PDLIM5-215ENST00000511586 ZNHIT2Q9UHR6 403 aa7.09□□□□□ -1.27
PDLIM5-215ENST00000511586 APPL1Q9UKG1 709 aa7.09□□□□□ -1.27
PDLIM5-215ENST00000511586 GPSM3Q9Y4H4 160 aa7.09□□□□□ -1.27
PDLIM5-215ENST00000511586 KCTD3Q9Y597 815 aa7.09□□□□□ -1.27
PDLIM5-215ENST00000511586 PCDHGA1Q9Y5H4 931 aa7.09□□□□□ -1.27
PDLIM5-215ENST00000511586 OAS3Q9Y6K5 1087 aaKnown RBP7.09□□□□□ -1.27
PDLIM5-215ENST00000511586 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP7.08□□□□□ -1.28
PDLIM5-215ENST00000511586 MED19A0JLT2 244 aaPredicted RBP7.08□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms