RNA–Protein interactions for RNA: ENST00000511439.5

TOPBP1-208, Transcript of DNA topoisomerase II binding protein 1, humanhuman

TSL 5

Gene TOPBP1, Length 1,142 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOPBP1-208ENST00000511439 KALRNO60229 2985 aa3.76□□□□□ -1.81
TOPBP1-208ENST00000511439 UBR5O95071 2799 aaPredicted RBP3.76□□□□□ -1.81
TOPBP1-208ENST00000511439 CELSR3Q9NYQ7 3312 aa3.75□□□□□ -1.81
TOPBP1-208ENST00000511439 SMCHD1A6NHR9 2005 aa3.75□□□□□ -1.81
TOPBP1-208ENST00000511439 TRBV5-7A0A0A0MS05 114 aa3.75□□□□□ -1.81
TOPBP1-208ENST00000511439 CCDC196A0A1B0GTZ2 297 aa3.75□□□□□ -1.81
TOPBP1-208ENST00000511439 ANKRD18BA2A2Z9 1011 aa3.75□□□□□ -1.81
TOPBP1-208ENST00000511439 SH2D7A6NKC9 451 aaPredicted RBP3.75□□□□□ -1.81
TOPBP1-208ENST00000511439 PRR23D1E9PI22 279 aaPredicted RBP3.75□□□□□ -1.81
TOPBP1-208ENST00000511439 CTAGE5O15320 804 aa3.75□□□□□ -1.81
TOPBP1-208ENST00000511439 DDAH2O95865 285 aa3.75□□□□□ -1.81
TOPBP1-208ENST00000511439 CXCL10P02778 98 aa3.75□□□□□ -1.81
TOPBP1-208ENST00000511439 PGK2P07205 417 aa3.75□□□□□ -1.81
TOPBP1-208ENST00000511439 PRR23D2P0DMB1 279 aaPredicted RBP3.75□□□□□ -1.81
TOPBP1-208ENST00000511439 HOXB8P17481 243 aaPredicted RBP3.75□□□□□ -1.81
TOPBP1-208ENST00000511439 PSMC2P35998 433 aaKnown RBP3.75□□□□□ -1.81
TOPBP1-208ENST00000511439 MAGEA9P43362 315 aa3.75□□□□□ -1.81
TOPBP1-208ENST00000511439 ME1P48163 572 aa3.75□□□□□ -1.81
TOPBP1-208ENST00000511439 CYP2J2P51589 502 aa3.75□□□□□ -1.81
TOPBP1-208ENST00000511439 PMPCAQ10713 525 aa3.75□□□□□ -1.81
TOPBP1-208ENST00000511439 TBX2Q13207 712 aaPredicted RBP3.75□□□□□ -1.81
TOPBP1-208ENST00000511439 ASPHD1Q5U4P2 390 aa3.75□□□□□ -1.81
TOPBP1-208ENST00000511439 CES5AQ6NT32 575 aa3.75□□□□□ -1.81
TOPBP1-208ENST00000511439 AAGABQ6PD74 315 aa3.75□□□□□ -1.81
TOPBP1-208ENST00000511439 LRRC8DQ7L1W4 858 aa3.75□□□□□ -1.81
TOPBP1-208ENST00000511439 KDELC2Q7Z4H8 507 aa3.75□□□□□ -1.81
TOPBP1-208ENST00000511439 RBM23Q86U06 439 aaKnown RBP3.75□□□□□ -1.81
TOPBP1-208ENST00000511439 TLK2Q86UE8 772 aa3.75□□□□□ -1.81
TOPBP1-208ENST00000511439 CCDC25Q86WR0 208 aa3.75□□□□□ -1.81
TOPBP1-208ENST00000511439 PAF1Q8N7H5 531 aa3.75□□□□□ -1.81
TOPBP1-208ENST00000511439 SETD9Q8NE22 299 aa3.75□□□□□ -1.81
TOPBP1-208ENST00000511439 MPLKIPQ8TAP9 179 aa3.75□□□□□ -1.81
TOPBP1-208ENST00000511439 HDAC7Q8WUI4 952 aa3.75□□□□□ -1.81
TOPBP1-208ENST00000511439 CDCA3Q99618 268 aaPredicted RBP3.75□□□□□ -1.81
TOPBP1-208ENST00000511439 NAP1L4Q99733 375 aaKnown RBP3.75□□□□□ -1.81
TOPBP1-208ENST00000511439 CLSTN3Q9BQT9 956 aa3.75□□□□□ -1.81
TOPBP1-208ENST00000511439 TRMOQ9BU70 441 aa3.75□□□□□ -1.81
TOPBP1-208ENST00000511439 NPLQ9BXD5 320 aaPredicted RBP3.75□□□□□ -1.81
TOPBP1-208ENST00000511439 UBA5Q9GZZ9 404 aa3.75□□□□□ -1.81
TOPBP1-208ENST00000511439 S1PR5Q9H228 398 aa3.75□□□□□ -1.81
TOPBP1-208ENST00000511439 POMKQ9H5K3 350 aa3.75□□□□□ -1.81
TOPBP1-208ENST00000511439 AAMDCQ9H7C9 122 aa3.75□□□□□ -1.81
TOPBP1-208ENST00000511439 TLE6Q9H808 572 aa3.75□□□□□ -1.81
TOPBP1-208ENST00000511439 HEY2Q9UBP5 337 aa3.75□□□□□ -1.81
TOPBP1-208ENST00000511439 TSPYL4Q9UJ04 414 aa3.75□□□□□ -1.81
TOPBP1-208ENST00000511439 ANAPC4Q9UJX5 808 aa3.75□□□□□ -1.81
TOPBP1-208ENST00000511439 KLK13Q9UKR3 277 aa3.75□□□□□ -1.81
TOPBP1-208ENST00000511439 HSF4Q9ULV5 492 aa3.75□□□□□ -1.81
TOPBP1-208ENST00000511439 PCDHA12Q9UN75 941 aa3.75□□□□□ -1.81
TOPBP1-208ENST00000511439 LRP12Q9Y561 859 aa3.75□□□□□ -1.81
TOPBP1-208ENST00000511439 MYH3P11055 1940 aa3.75□□□□□ -1.81
TOPBP1-208ENST00000511439 TICRRQ7Z2Z1 1910 aa3.74□□□□□ -1.81
TOPBP1-208ENST00000511439 C11orf97A0A1B0GVM6 126 aaPredicted RBP3.74□□□□□ -1.81
TOPBP1-208ENST00000511439 OR6C68A6NDL8 312 aa3.74□□□□□ -1.81
TOPBP1-208ENST00000511439 HMGB1P1B2RPK0 211 aaPredicted RBP3.74□□□□□ -1.81
TOPBP1-208ENST00000511439 F5H6K3 240 aa3.74□□□□□ -1.81
TOPBP1-208ENST00000511439 ATG13O75143 517 aa3.74□□□□□ -1.81
TOPBP1-208ENST00000511439 TULP3O75386 442 aa3.74□□□□□ -1.81
TOPBP1-208ENST00000511439 SLC25A27O95847 323 aa3.74□□□□□ -1.81
TOPBP1-208ENST00000511439 SNAI1O95863 264 aaPredicted RBP3.74□□□□□ -1.81
TOPBP1-208ENST00000511439 IFIT1P09914 478 aaKnown RBP3.74□□□□□ -1.81
TOPBP1-208ENST00000511439 CEACAM1P13688 526 aa3.74□□□□□ -1.81
TOPBP1-208ENST00000511439 PRKCHP24723 683 aa3.74□□□□□ -1.81
TOPBP1-208ENST00000511439 KLRC2P26717 231 aa3.74□□□□□ -1.81
TOPBP1-208ENST00000511439 SLC16A2P36021 539 aa3.74□□□□□ -1.81
TOPBP1-208ENST00000511439 PGM1P36871 562 aa3.74□□□□□ -1.81
TOPBP1-208ENST00000511439 MTHFRP42898 656 aa3.74□□□□□ -1.81
TOPBP1-208ENST00000511439 THBS3P49746 956 aa3.74□□□□□ -1.81
TOPBP1-208ENST00000511439 KRTAP10-6P60371 365 aaPredicted RBP3.74□□□□□ -1.81
TOPBP1-208ENST00000511439 ACVR2BQ13705 512 aa3.74□□□□□ -1.81
TOPBP1-208ENST00000511439 PKP1Q13835 747 aa3.74□□□□□ -1.81
TOPBP1-208ENST00000511439 ALG10Q5BKT4 473 aa3.74□□□□□ -1.81
TOPBP1-208ENST00000511439 CAVIN4Q5BKX8 364 aa3.74□□□□□ -1.81
TOPBP1-208ENST00000511439 ALG10BQ5I7T1 473 aa3.74□□□□□ -1.81
TOPBP1-208ENST00000511439 ENTPD8Q5MY95 495 aa3.74□□□□□ -1.81
TOPBP1-208ENST00000511439 C6orf10Q5SRN2 563 aa3.74□□□□□ -1.81
TOPBP1-208ENST00000511439 ANKRD54Q6NXT1 300 aa3.74□□□□□ -1.81
TOPBP1-208ENST00000511439 LIN28BQ6ZN17 250 aaKnown RBP eCLIP3.74□□□□□ -1.812e-7■■■■□ 23.8
TOPBP1-208ENST00000511439 C9orf47Q6ZRZ4 202 aa3.74□□□□□ -1.81
TOPBP1-208ENST00000511439 MEPCEQ7L2J0 689 aaKnown RBP3.74□□□□□ -1.81
TOPBP1-208ENST00000511439 IGFN1Q86VF2 1251 aa3.74□□□□□ -1.81
TOPBP1-208ENST00000511439 NLRC5Q86WI3 1866 aa3.74□□□□□ -1.81
TOPBP1-208ENST00000511439 ARFGAP1Q8N6T3 406 aa3.74□□□□□ -1.81
TOPBP1-208ENST00000511439 ATP8B4Q8TF62 1192 aa3.74□□□□□ -1.81
TOPBP1-208ENST00000511439 FAR1Q8WVX9 515 aa3.74□□□□□ -1.81
TOPBP1-208ENST00000511439 SEC62Q99442 399 aaKnown RBP3.74□□□□□ -1.81
TOPBP1-208ENST00000511439 IFT27Q9BW83 186 aa3.74□□□□□ -1.81
TOPBP1-208ENST00000511439 TTC12Q9H892 705 aaPredicted RBP3.74□□□□□ -1.81
TOPBP1-208ENST00000511439 ACTR5Q9H9F9 607 aaPredicted RBP3.74□□□□□ -1.81
TOPBP1-208ENST00000511439 UBN1Q9NPG3 1134 aa3.74□□□□□ -1.81
TOPBP1-208ENST00000511439 RNF146Q9NTX7 359 aa3.74□□□□□ -1.81
TOPBP1-208ENST00000511439 HYPKQ9NX55 129 aa3.74□□□□□ -1.81
TOPBP1-208ENST00000511439 ZDHHC7Q9NXF8 308 aa3.74□□□□□ -1.81
TOPBP1-208ENST00000511439 ICKQ9UPZ9 632 aa3.74□□□□□ -1.81
TOPBP1-208ENST00000511439 TMEM98Q9Y2Y6 226 aa3.74□□□□□ -1.81
TOPBP1-208ENST00000511439 CLDN16Q9Y5I7 305 aa3.74□□□□□ -1.81
TOPBP1-208ENST00000511439 HS3ST3B1Q9Y662 390 aa3.74□□□□□ -1.81
TOPBP1-208ENST00000511439 CREBBPQ92793 2442 aa3.74□□□□□ -1.81
TOPBP1-208ENST00000511439 A0A0A0MQY5 61 aa3.73□□□□□ -1.81
TOPBP1-208ENST00000511439 TARSL2A2RTX5 802 aaKnown RBP3.73□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms