RNA–Protein interactions for RNA: ENST00000509784.1

CALCOCO2-216, Transcript of calcium binding and coiled-coil domain 2, humanhuman

TSL 4

Gene CALCOCO2, Length 578 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALCOCO2-216ENST00000509784 BEST2Q8NFU1 509 aa3.22□□□□□ -1.89
CALCOCO2-216ENST00000509784 C16orf52Q8NHV5 167 aa3.22□□□□□ -1.89
CALCOCO2-216ENST00000509784 INPP5DQ92835 1189 aa3.22□□□□□ -1.89
CALCOCO2-216ENST00000509784 SNAPC3Q92966 411 aa3.22□□□□□ -1.89
CALCOCO2-216ENST00000509784 OTULINQ96BN8 352 aa3.22□□□□□ -1.89
CALCOCO2-216ENST00000509784 TMEM68Q96MH6 324 aa3.22□□□□□ -1.89
CALCOCO2-216ENST00000509784 ZNF830Q96NB3 372 aaPredicted RBP3.22□□□□□ -1.89
CALCOCO2-216ENST00000509784 CRAMP1Q96RY5 1269 aa3.22□□□□□ -1.89
CALCOCO2-216ENST00000509784 MEIS3Q99687 375 aa3.22□□□□□ -1.89
CALCOCO2-216ENST00000509784 NCAPGQ9BPX3 1015 aa3.22□□□□□ -1.89
CALCOCO2-216ENST00000509784 MSTO1Q9BUK6 570 aa3.22□□□□□ -1.89
CALCOCO2-216ENST00000509784 SPRTNQ9H040 489 aaPredicted RBP3.22□□□□□ -1.89
CALCOCO2-216ENST00000509784 ISCUQ9H1K1 167 aa3.22□□□□□ -1.89
CALCOCO2-216ENST00000509784 FZD3Q9NPG1 666 aa3.22□□□□□ -1.89
CALCOCO2-216ENST00000509784 DDX4Q9NQI0 724 aaKnown RBP3.22□□□□□ -1.89
CALCOCO2-216ENST00000509784 SIRT3Q9NTG7 399 aaPredicted RBP3.22□□□□□ -1.89
CALCOCO2-216ENST00000509784 TUBA8Q9NY65 449 aaPredicted RBP3.22□□□□□ -1.89
CALCOCO2-216ENST00000509784 CISD1Q9NZ45 108 aaKnown RBP3.22□□□□□ -1.89
CALCOCO2-216ENST00000509784 CGNQ9P2M7 1197 aaKnown RBP3.22□□□□□ -1.89
CALCOCO2-216ENST00000509784 CTNNA3Q9UI47 895 aa3.22□□□□□ -1.89
CALCOCO2-216ENST00000509784 NENFQ9UMX5 172 aa3.22□□□□□ -1.89
CALCOCO2-216ENST00000509784 SNX8Q9Y5X2 465 aa3.22□□□□□ -1.89
CALCOCO2-216ENST00000509784 HS3ST3B1Q9Y662 390 aa3.22□□□□□ -1.89
CALCOCO2-216ENST00000509784 RPS6KL1Q9Y6S9 549 aa3.22□□□□□ -1.89
CALCOCO2-216ENST00000509784 CFAP65Q6ZU64 1925 aaKnown RBP3.22□□□□□ -1.89
CALCOCO2-216ENST00000509784 ABCC6O95255 1503 aa3.22□□□□□ -1.89
CALCOCO2-216ENST00000509784 ELP1O95163 1332 aa3.21□□□□□ -1.89
CALCOCO2-216ENST00000509784 TTC21AQ8NDW8 1320 aa3.21□□□□□ -1.89
CALCOCO2-216ENST00000509784 KDM3BQ7LBC6 1761 aa3.21□□□□□ -1.9
CALCOCO2-216ENST00000509784 GAGE12JA6NER3 117 aa3.21□□□□□ -1.9
CALCOCO2-216ENST00000509784 A8MZ25 164 aa3.21□□□□□ -1.9
CALCOCO2-216ENST00000509784 KDM4EB2RXH2 506 aaPredicted RBP3.21□□□□□ -1.9
CALCOCO2-216ENST00000509784 AKR1B15C9JRZ8 316 aaPredicted RBP3.21□□□□□ -1.9
CALCOCO2-216ENST00000509784 H0YGN5 161 aa3.21□□□□□ -1.9
CALCOCO2-216ENST00000509784 LDB2O43679 373 aa3.21□□□□□ -1.9
CALCOCO2-216ENST00000509784 EPN2O95208 641 aa3.21□□□□□ -1.9
CALCOCO2-216ENST00000509784 FGBP02675 491 aa3.21□□□□□ -1.9
CALCOCO2-216ENST00000509784 MMP2P08253 660 aa3.21□□□□□ -1.9
CALCOCO2-216ENST00000509784 HMOX1P09601 288 aa3.21□□□□□ -1.9
CALCOCO2-216ENST00000509784 PRF1P14222 555 aa3.21□□□□□ -1.9
CALCOCO2-216ENST00000509784 GABRB1P18505 474 aa3.21□□□□□ -1.9
CALCOCO2-216ENST00000509784 MYF6P23409 242 aa3.21□□□□□ -1.9
CALCOCO2-216ENST00000509784 HSPA4P34932 840 aa3.21□□□□□ -1.9
CALCOCO2-216ENST00000509784 PIGAP37287 484 aa3.21□□□□□ -1.9
CALCOCO2-216ENST00000509784 THPOP40225 353 aa3.21□□□□□ -1.9
CALCOCO2-216ENST00000509784 EIF2DP41214 584 aaKnown RBP3.21□□□□□ -1.9
CALCOCO2-216ENST00000509784 ABCG1P45844 678 aa3.21□□□□□ -1.9
CALCOCO2-216ENST00000509784 ME1P48163 572 aa3.21□□□□□ -1.9
CALCOCO2-216ENST00000509784 CAMPP49913 170 aa3.21□□□□□ -1.9
CALCOCO2-216ENST00000509784 ZNF75DP51815 510 aa3.21□□□□□ -1.9
CALCOCO2-216ENST00000509784 PSMC6P62333 389 aa3.21□□□□□ -1.9
CALCOCO2-216ENST00000509784 SLC20A2Q08357 652 aa3.21□□□□□ -1.9
CALCOCO2-216ENST00000509784 EPS8Q12929 822 aa3.21□□□□□ -1.9
CALCOCO2-216ENST00000509784 STK4Q13043 487 aa3.21□□□□□ -1.9
CALCOCO2-216ENST00000509784 IKQ13123 557 aaPredicted RBP3.21□□□□□ -1.9
CALCOCO2-216ENST00000509784 GPR18Q14330 331 aa3.21□□□□□ -1.9
CALCOCO2-216ENST00000509784 PTGR1Q14914 329 aa3.21□□□□□ -1.9
CALCOCO2-216ENST00000509784 NAB2Q15742 525 aa3.21□□□□□ -1.9
CALCOCO2-216ENST00000509784 SMN1Q16637 294 aaKnown RBP3.21□□□□□ -1.9
CALCOCO2-216ENST00000509784 C2orf68Q2NKX9 166 aa3.21□□□□□ -1.9
CALCOCO2-216ENST00000509784 USP41Q3LFD5 358 aa3.21□□□□□ -1.9
CALCOCO2-216ENST00000509784 DCAF6Q58WW2 860 aa3.21□□□□□ -1.9
CALCOCO2-216ENST00000509784 RAB41Q5JT25 222 aa3.21□□□□□ -1.9
CALCOCO2-216ENST00000509784 PLEKHS1Q5SXH7 462 aa3.21□□□□□ -1.9
CALCOCO2-216ENST00000509784 C6orf141Q5SZD1 244 aa3.21□□□□□ -1.9
CALCOCO2-216ENST00000509784 PXDC1Q5TGL8 231 aa3.21□□□□□ -1.9
CALCOCO2-216ENST00000509784 DCAF12L2Q5VW00 463 aa3.21□□□□□ -1.9
CALCOCO2-216ENST00000509784 MORN5Q5VZ52 161 aa3.21□□□□□ -1.9
CALCOCO2-216ENST00000509784 KIAA0930Q6ICG6 404 aaPredicted RBP3.21□□□□□ -1.9
CALCOCO2-216ENST00000509784 RBM43Q6ZSC3 357 aaKnown RBP3.21□□□□□ -1.9
CALCOCO2-216ENST00000509784 ZNF771Q7L3S4 317 aaPredicted RBP3.21□□□□□ -1.9
CALCOCO2-216ENST00000509784 ARHGAP30Q7Z6I6 1101 aaPredicted RBP3.21□□□□□ -1.9
CALCOCO2-216ENST00000509784 PIP4P1Q86T03 277 aa3.21□□□□□ -1.9
CALCOCO2-216ENST00000509784 SFTPA2Q8IWL1 248 aa3.21□□□□□ -1.9
CALCOCO2-216ENST00000509784 ARFGAP1Q8N6T3 406 aa3.21□□□□□ -1.9
CALCOCO2-216ENST00000509784 LSMEM1Q8N8F7 131 aa3.21□□□□□ -1.9
CALCOCO2-216ENST00000509784 ZNF397Q8NF99 534 aaPredicted RBP3.21□□□□□ -1.9
CALCOCO2-216ENST00000509784 OR14L1PQ8NHC6 308 aa3.21□□□□□ -1.9
CALCOCO2-216ENST00000509784 KIF18AQ8NI77 898 aa3.21□□□□□ -1.9
CALCOCO2-216ENST00000509784 GABPB2Q8TAK5 448 aaPredicted RBP3.21□□□□□ -1.9
CALCOCO2-216ENST00000509784 ARRDC2Q8TBH0 407 aa3.21□□□□□ -1.9
CALCOCO2-216ENST00000509784 BICD2Q8TD16 824 aa3.21□□□□□ -1.9
CALCOCO2-216ENST00000509784 PIGOQ8TEQ8 1089 aa3.21□□□□□ -1.9
CALCOCO2-216ENST00000509784 NTN5Q8WTR8 489 aaPredicted RBP3.21□□□□□ -1.9
CALCOCO2-216ENST00000509784 SNRNP27Q8WVK2 155 aaKnown RBP3.21□□□□□ -1.9
CALCOCO2-216ENST00000509784 LPAR1Q92633 364 aa3.21□□□□□ -1.9
CALCOCO2-216ENST00000509784 ERGIC1Q969X5 290 aa3.21□□□□□ -1.9
CALCOCO2-216ENST00000509784 SLC25A28Q96A46 364 aa3.21□□□□□ -1.9
CALCOCO2-216ENST00000509784 JAKMIP2Q96AA8 810 aa3.21□□□□□ -1.9
CALCOCO2-216ENST00000509784 SAT2Q96F10 170 aaPredicted RBP3.21□□□□□ -1.9
CALCOCO2-216ENST00000509784 ELMOD3Q96FG2 381 aa3.21□□□□□ -1.9
CALCOCO2-216ENST00000509784 VCPIP1Q96JH7 1222 aa3.21□□□□□ -1.9
CALCOCO2-216ENST00000509784 FEM1CQ96JP0 617 aa3.21□□□□□ -1.9
CALCOCO2-216ENST00000509784 APOLD1Q96LR9 279 aa3.21□□□□□ -1.9
CALCOCO2-216ENST00000509784 TTC14Q96N46 770 aa3.21□□□□□ -1.9
CALCOCO2-216ENST00000509784 SLITRK1Q96PX8 696 aa3.21□□□□□ -1.9
CALCOCO2-216ENST00000509784 PRAM1Q96QH2 718 aa3.21□□□□□ -1.9
CALCOCO2-216ENST00000509784 TMEM47Q9BQJ4 181 aa3.21□□□□□ -1.9
CALCOCO2-216ENST00000509784 SRSF8Q9BRL6 282 aaKnown RBP3.21□□□□□ -1.9
CALCOCO2-216ENST00000509784 IFIH1Q9BYX4 1025 aaKnown RBP3.21□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms