RNA–Protein interactions for RNA: ENST00000509409.5

TPM3-219, Transcript of tropomyosin 3, humanhuman

TSL 2

Gene TPM3, Length 1,248 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-219ENST00000509409 ZNF761Q86XN6 746 aaPredicted RBP15.27■□□□□ 0.04
TPM3-219ENST00000509409 RAVER1Q8IY67 606 aaKnown RBP15.27■□□□□ 0.04
TPM3-219ENST00000509409 AGBL5Q8NDL9 886 aa15.27■□□□□ 0.04
TPM3-219ENST00000509409 CCDC112Q8NEF3 446 aa15.27■□□□□ 0.04
TPM3-219ENST00000509409 OR4D9Q8NGE8 314 aa15.27■□□□□ 0.04
TPM3-219ENST00000509409 SLC35G2Q8TBE7 412 aa15.27■□□□□ 0.04
TPM3-219ENST00000509409 JPH3Q8WXH2 748 aaPredicted RBP15.27■□□□□ 0.04
TPM3-219ENST00000509409 HDAC11Q96DB2 347 aa15.27■□□□□ 0.04
TPM3-219ENST00000509409 TAAR9Q96RI9 348 aa15.27■□□□□ 0.04
TPM3-219ENST00000509409 B8ZZF3 427 aa15.26■□□□□ 0.03
TPM3-219ENST00000509409 SNX2O60749 519 aa15.26■□□□□ 0.03
TPM3-219ENST00000509409 TMEM253P0C7T8 217 aa15.26■□□□□ 0.03
TPM3-219ENST00000509409 FGF3P11487 239 aaPredicted RBP15.26■□□□□ 0.03
TPM3-219ENST00000509409 MAN1A1P33908 653 aa15.26■□□□□ 0.03
TPM3-219ENST00000509409 GPLD1P80108 840 aa15.26■□□□□ 0.03
TPM3-219ENST00000509409 SNAP47Q5SQN1 464 aa15.26■□□□□ 0.03
TPM3-219ENST00000509409 TMEM71Q6P5X7 295 aa15.26■□□□□ 0.03
TPM3-219ENST00000509409 OR10G6Q8NH81 332 aa15.26■□□□□ 0.03
TPM3-219ENST00000509409 SLC37A2Q8TED4 501 aa15.26■□□□□ 0.03
TPM3-219ENST00000509409 LYSMD1Q96S90 227 aa15.26■□□□□ 0.03
TPM3-219ENST00000509409 ANP32EQ9BTT0 268 aa15.26■□□□□ 0.03
TPM3-219ENST00000509409 SPATA16Q9BXB7 569 aa15.26■□□□□ 0.03
TPM3-219ENST00000509409 B3GNT4Q9C0J1 378 aa15.26■□□□□ 0.03
TPM3-219ENST00000509409 STN1Q9H668 368 aaKnown RBP15.26■□□□□ 0.03
TPM3-219ENST00000509409 SLC39A1Q9NY26 324 aa15.26■□□□□ 0.03
TPM3-219ENST00000509409 CNOT6Q9ULM6 557 aaKnown RBP15.26■□□□□ 0.03
TPM3-219ENST00000509409 KCNK6Q9Y257 313 aa15.26■□□□□ 0.03
TPM3-219ENST00000509409 OAS3Q9Y6K5 1087 aaKnown RBP15.26■□□□□ 0.03
TPM3-219ENST00000509409 GCN1Q92616 2671 aaKnown RBP15.26■□□□□ 0.03
TPM3-219ENST00000509409 SSU72P8A0A1W2PR75 194 aa15.25■□□□□ 0.03
TPM3-219ENST00000509409 RGSL1A5PLK6 1076 aa15.25■□□□□ 0.03
TPM3-219ENST00000509409 A8MU76 341 aa15.25■□□□□ 0.03
TPM3-219ENST00000509409 STMND1H3BQB6 276 aa15.25■□□□□ 0.03
TPM3-219ENST00000509409 J3QKU1 62 aa15.25■□□□□ 0.03
TPM3-219ENST00000509409 APOL1O14791 398 aa15.25■□□□□ 0.03
TPM3-219ENST00000509409 DNAJC6O75061 913 aa15.25■□□□□ 0.03
TPM3-219ENST00000509409 MMP2P08253 660 aa15.25■□□□□ 0.03
TPM3-219ENST00000509409 ACP5P13686 325 aa15.25■□□□□ 0.03
TPM3-219ENST00000509409 TNNT1P13805 278 aa15.25■□□□□ 0.03
TPM3-219ENST00000509409 ZFXP17010 805 aaPredicted RBP15.25■□□□□ 0.03
TPM3-219ENST00000509409 PTMSP20962 102 aa15.25■□□□□ 0.03
TPM3-219ENST00000509409 ATP1A2P50993 1020 aa15.25■□□□□ 0.03
TPM3-219ENST00000509409 PPIDQ08752 370 aaKnown RBP15.25■□□□□ 0.03
TPM3-219ENST00000509409 NFATC2Q13469 925 aa15.25■□□□□ 0.03
TPM3-219ENST00000509409 SQSTM1Q13501 440 aa15.25■□□□□ 0.03
TPM3-219ENST00000509409 TRIM14Q14142 442 aa15.25■□□□□ 0.03
TPM3-219ENST00000509409 GALNT3Q14435 633 aa15.25■□□□□ 0.03
TPM3-219ENST00000509409 PDK1Q15118 436 aa15.25■□□□□ 0.03
TPM3-219ENST00000509409 FAM182AQ5T1J6 154 aa15.25■□□□□ 0.03
TPM3-219ENST00000509409 FAM129CQ86XR2 697 aa15.25■□□□□ 0.03
TPM3-219ENST00000509409 RFX6Q8HWS3 928 aa15.25■□□□□ 0.03
TPM3-219ENST00000509409 NCSTNQ92542 709 aa15.25■□□□□ 0.03
TPM3-219ENST00000509409 EXTL1Q92935 676 aa15.25■□□□□ 0.03
TPM3-219ENST00000509409 ART4Q93070 314 aa15.25■□□□□ 0.03
TPM3-219ENST00000509409 CCDC42Q96M95 316 aa15.25■□□□□ 0.03
TPM3-219ENST00000509409 AGAP3Q96P47 875 aa15.25■□□□□ 0.03
TPM3-219ENST00000509409 WDR24Q96S15 920 aa15.25■□□□□ 0.03
TPM3-219ENST00000509409 CEP41Q9BYV8 373 aa15.25■□□□□ 0.03
TPM3-219ENST00000509409 RMI1Q9H9A7 625 aa15.25■□□□□ 0.03
TPM3-219ENST00000509409 TMEM9Q9P0T7 183 aa15.25■□□□□ 0.03
TPM3-219ENST00000509409 VPS18Q9P253 973 aa15.25■□□□□ 0.03
TPM3-219ENST00000509409 ATMQ13315 3056 aa15.25■□□□□ 0.03
TPM3-219ENST00000509409 EFCAB7A8K855 629 aa15.24■□□□□ 0.03
TPM3-219ENST00000509409 GRID2O43424 1007 aa15.24■□□□□ 0.03
TPM3-219ENST00000509409 DUX1O43812 170 aa15.24■□□□□ 0.03
TPM3-219ENST00000509409 EML2O95834 649 aa15.24■□□□□ 0.03
TPM3-219ENST00000509409 SLC4A1P02730 911 aa15.24■□□□□ 0.03
TPM3-219ENST00000509409 KRT1P04264 644 aa15.24■□□□□ 0.03
TPM3-219ENST00000509409 ARHGAP25P42331 645 aa15.24■□□□□ 0.03
TPM3-219ENST00000509409 MAPK9P45984 424 aa15.24■□□□□ 0.03
TPM3-219ENST00000509409 FASLGP48023 281 aa15.24■□□□□ 0.03
TPM3-219ENST00000509409 IFI35P80217 286 aaPredicted RBP15.24■□□□□ 0.03
TPM3-219ENST00000509409 HHEXQ03014 270 aa15.24■□□□□ 0.03
TPM3-219ENST00000509409 ZBTB17Q13105 803 aa15.24■□□□□ 0.03
TPM3-219ENST00000509409 PCSK7Q16549 785 aa15.24■□□□□ 0.03
TPM3-219ENST00000509409 ASTE1Q2TB18 679 aaPredicted RBP15.24■□□□□ 0.03
TPM3-219ENST00000509409 HENMT1Q5T8I9 393 aaKnown RBP15.24■□□□□ 0.03
TPM3-219ENST00000509409 ALS2CLQ60I27 953 aa15.24■□□□□ 0.03
TPM3-219ENST00000509409 CCDC70Q6NSX1 233 aa15.24■□□□□ 0.03
TPM3-219ENST00000509409 IYDQ6PHW0 289 aa15.24■□□□□ 0.03
TPM3-219ENST00000509409 NPNTQ6UXI9 565 aa15.24■□□□□ 0.03
TPM3-219ENST00000509409 LYSMD3Q7Z3D4 306 aa15.24■□□□□ 0.03
TPM3-219ENST00000509409 SLC9B2Q86UD5 537 aa15.24■□□□□ 0.03
TPM3-219ENST00000509409 NT5DC3Q86UY8 548 aa15.24■□□□□ 0.03
TPM3-219ENST00000509409 DTX1Q86Y01 620 aa15.24■□□□□ 0.03
TPM3-219ENST00000509409 SFRP1Q8N474 314 aa15.24■□□□□ 0.03
TPM3-219ENST00000509409 PLD5Q8N7P1 536 aa15.24■□□□□ 0.03
TPM3-219ENST00000509409 CNTD1Q8N815 330 aa15.24■□□□□ 0.03
TPM3-219ENST00000509409 EXD3Q8N9H8 876 aa15.24■□□□□ 0.03
TPM3-219ENST00000509409 SH3KBP1Q96B97 665 aa15.24■□□□□ 0.03
TPM3-219ENST00000509409 RNF25Q96BH1 459 aaPredicted RBP15.24■□□□□ 0.03
TPM3-219ENST00000509409 DNAJC7Q99615 494 aa15.24■□□□□ 0.03
TPM3-219ENST00000509409 ZFYVE1Q9HBF4 777 aa15.24■□□□□ 0.03
TPM3-219ENST00000509409 ARFGAP3Q9NP61 516 aa15.24■□□□□ 0.03
TPM3-219ENST00000509409 TBC1D29Q9UFV1 150 aa15.24■□□□□ 0.03
TPM3-219ENST00000509409 SHOC2Q9UQ13 582 aa15.24■□□□□ 0.03
TPM3-219ENST00000509409 PCYT1BQ9Y5K3 369 aaPredicted RBP15.24■□□□□ 0.03
TPM3-219ENST00000509409 ARHGEF17Q96PE2 2063 aaPredicted RBP15.24■□□□□ 0.03
TPM3-219ENST00000509409 FADS2P1A8MWK0 482 aa15.23■□□□□ 0.03
TPM3-219ENST00000509409 PPP1R12AO14974 1030 aaPredicted RBP15.23■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms