RNA–Protein interactions for RNA: ENST00000509258.5

RNF4-212, Transcript of ring finger protein 4, humanhuman

TSL 1 (best) BASIC

Gene RNF4, Length 893 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-212ENST00000509258 DPTQ07507 201 aa10.84□□□□□ -0.67
RNF4-212ENST00000509258 TAZQ16635 292 aa10.84□□□□□ -0.67
RNF4-212ENST00000509258 SKOR2Q2VWA4 1001 aaPredicted RBP10.84□□□□□ -0.67
RNF4-212ENST00000509258 LINC00303Q3SY05 128 aa10.84□□□□□ -0.67
RNF4-212ENST00000509258 ZNF648Q5T619 568 aaPredicted RBP10.84□□□□□ -0.67
RNF4-212ENST00000509258 PHF19Q5T6S3 580 aa10.84□□□□□ -0.67
RNF4-212ENST00000509258 TIGD7Q6NT04 549 aaPredicted RBP10.84□□□□□ -0.67
RNF4-212ENST00000509258 SLC30A9Q6PML9 568 aa10.84□□□□□ -0.67
RNF4-212ENST00000509258 ADAMTSL4Q6UY14 1074 aa10.84□□□□□ -0.67
RNF4-212ENST00000509258 MARK2Q7KZI7 788 aaKnown RBP10.84□□□□□ -0.67
RNF4-212ENST00000509258 PIM3Q86V86 326 aa10.84□□□□□ -0.67
RNF4-212ENST00000509258 LRRC49Q8IUZ0 686 aa10.84□□□□□ -0.67
RNF4-212ENST00000509258 SLITRK4Q8IW52 837 aa10.84□□□□□ -0.67
RNF4-212ENST00000509258 NAGSQ8N159 534 aa10.84□□□□□ -0.67
RNF4-212ENST00000509258 CCNYQ8ND76 341 aa10.84□□□□□ -0.67
RNF4-212ENST00000509258 CCDC112Q8NEF3 446 aa10.84□□□□□ -0.67
RNF4-212ENST00000509258 TADA1Q96BN2 335 aa10.84□□□□□ -0.67
RNF4-212ENST00000509258 AP2M1Q96CW1 435 aa10.84□□□□□ -0.67
RNF4-212ENST00000509258 COX14Q96I36 57 aa10.84□□□□□ -0.67
RNF4-212ENST00000509258 TRIB3Q96RU7 358 aa10.84□□□□□ -0.67
RNF4-212ENST00000509258 HERPUD2Q9BSE4 406 aa10.84□□□□□ -0.67
RNF4-212ENST00000509258 B3GNT4Q9C0J1 378 aa10.84□□□□□ -0.67
RNF4-212ENST00000509258 SEMA6CQ9H3T2 930 aa10.84□□□□□ -0.67
RNF4-212ENST00000509258 PCDH9Q9HC56 1237 aa10.84□□□□□ -0.67
RNF4-212ENST00000509258 ARFGAP3Q9NP61 516 aa10.84□□□□□ -0.67
RNF4-212ENST00000509258 STARD5Q9NSY2 213 aa10.84□□□□□ -0.67
RNF4-212ENST00000509258 TRNAU1APQ9NX07 287 aaKnown RBP10.84□□□□□ -0.67
RNF4-212ENST00000509258 FOXJ2Q9P0K8 574 aa10.84□□□□□ -0.67
RNF4-212ENST00000509258 PRKAB1Q9Y478 270 aa10.84□□□□□ -0.67
RNF4-212ENST00000509258 PTPN13Q12923 2485 aa10.84□□□□□ -0.67
RNF4-212ENST00000509258 PIKFYVEQ9Y2I7 2098 aa10.83□□□□□ -0.68
RNF4-212ENST00000509258 RCCD1A6NED2 376 aa10.83□□□□□ -0.68
RNF4-212ENST00000509258 HGSO14964 777 aaPredicted RBP10.83□□□□□ -0.68
RNF4-212ENST00000509258 ECEL1O95672 775 aa10.83□□□□□ -0.68
RNF4-212ENST00000509258 ATP1A1P05023 1023 aaKnown RBP10.83□□□□□ -0.68
RNF4-212ENST00000509258 TPM3P06753 285 aa10.83□□□□□ -0.68
RNF4-212ENST00000509258 IVLP07476 585 aa10.83□□□□□ -0.68
RNF4-212ENST00000509258 FAM87AP0C7U9 286 aa10.83□□□□□ -0.68
RNF4-212ENST00000509258 PTMSP20962 102 aa10.83□□□□□ -0.68
RNF4-212ENST00000509258 CSF2RBP32927 897 aa10.83□□□□□ -0.68
RNF4-212ENST00000509258 GPR1P46091 355 aa10.83□□□□□ -0.68
RNF4-212ENST00000509258 MAPK10P53779 464 aa10.83□□□□□ -0.68
RNF4-212ENST00000509258 NOMO1Q15155 1222 aa10.83□□□□□ -0.68
RNF4-212ENST00000509258 TCEAL1Q15170 157 aa10.83□□□□□ -0.68
RNF4-212ENST00000509258 PYCR3Q53H96 274 aa10.83□□□□□ -0.68
RNF4-212ENST00000509258 ZFYVE27Q5T4F4 411 aa10.83□□□□□ -0.68
RNF4-212ENST00000509258 ZNF574Q6ZN55 896 aaPredicted RBP10.83□□□□□ -0.68
RNF4-212ENST00000509258 LYSMD3Q7Z3D4 306 aa10.83□□□□□ -0.68
RNF4-212ENST00000509258 KDELC2Q7Z4H8 507 aa10.83□□□□□ -0.68
RNF4-212ENST00000509258 ZNF438Q7Z4V0 828 aa10.83□□□□□ -0.68
RNF4-212ENST00000509258 VASH2Q86V25 355 aa10.83□□□□□ -0.68
RNF4-212ENST00000509258 ZFAND4Q86XD8 727 aa10.83□□□□□ -0.68
RNF4-212ENST00000509258 ZNF761Q86XN6 746 aaPredicted RBP10.83□□□□□ -0.68
RNF4-212ENST00000509258 DTX1Q86Y01 620 aa10.83□□□□□ -0.68
RNF4-212ENST00000509258 SPATA22Q8NHS9 363 aa10.83□□□□□ -0.68
RNF4-212ENST00000509258 ZDHHC1Q8WTX9 485 aa10.83□□□□□ -0.68
RNF4-212ENST00000509258 USP7Q93009 1102 aa10.83□□□□□ -0.68
RNF4-212ENST00000509258 PMEPA1Q969W9 287 aa10.83□□□□□ -0.68
RNF4-212ENST00000509258 CCDC42Q96M95 316 aa10.83□□□□□ -0.68
RNF4-212ENST00000509258 LYSMD1Q96S90 227 aa10.83□□□□□ -0.68
RNF4-212ENST00000509258 DPYSL5Q9BPU6 564 aa10.83□□□□□ -0.68
RNF4-212ENST00000509258 NUDT22Q9BRQ3 303 aa10.83□□□□□ -0.68
RNF4-212ENST00000509258 ZMYND15Q9H091 742 aa10.83□□□□□ -0.68
RNF4-212ENST00000509258 CDH19Q9H159 772 aa10.83□□□□□ -0.68
RNF4-212ENST00000509258 RDH14Q9HBH5 336 aa10.83□□□□□ -0.68
RNF4-212ENST00000509258 DNPEPQ9ULA0 475 aa10.83□□□□□ -0.68
RNF4-212ENST00000509258 UBR5O95071 2799 aaPredicted RBP10.82□□□□□ -0.68
RNF4-212ENST00000509258 TRBV23OR9-2A0A075B6M9 112 aa10.82□□□□□ -0.68
RNF4-212ENST00000509258 C1orf232A0A0U1RR37 186 aa10.82□□□□□ -0.68
RNF4-212ENST00000509258 ZNF487B1APH4 448 aa10.82□□□□□ -0.68
RNF4-212ENST00000509258 C9orf172C9J069 976 aa10.82□□□□□ -0.68
RNF4-212ENST00000509258 AKR1B15C9JRZ8 316 aaPredicted RBP10.82□□□□□ -0.68
RNF4-212ENST00000509258 F5H423 210 aaPredicted RBP10.82□□□□□ -0.68
RNF4-212ENST00000509258 STMND1H3BQB6 276 aa10.82□□□□□ -0.68
RNF4-212ENST00000509258 APOL1O14791 398 aa10.82□□□□□ -0.68
RNF4-212ENST00000509258 AURKAO14965 403 aa10.82□□□□□ -0.68
RNF4-212ENST00000509258 PPM1DO15297 605 aa10.82□□□□□ -0.68
RNF4-212ENST00000509258 ARHGAP6O43182 974 aa10.82□□□□□ -0.68
RNF4-212ENST00000509258 DNAJC6O75061 913 aa10.82□□□□□ -0.68
RNF4-212ENST00000509258 MT-CYBP00156 380 aaPredicted RBP10.82□□□□□ -0.68
RNF4-212ENST00000509258 CA4P22748 312 aa10.82□□□□□ -0.68
RNF4-212ENST00000509258 CD68P34810 354 aaPredicted RBP10.82□□□□□ -0.68
RNF4-212ENST00000509258 CA5AP35218 305 aa10.82□□□□□ -0.68
RNF4-212ENST00000509258 CDKN2BP42772 138 aa10.82□□□□□ -0.68
RNF4-212ENST00000509258 GPR3P46089 330 aa10.82□□□□□ -0.68
RNF4-212ENST00000509258 SPINT3P49223 89 aa10.82□□□□□ -0.68
RNF4-212ENST00000509258 ATP1A2P50993 1020 aa10.82□□□□□ -0.68
RNF4-212ENST00000509258 EPHB1P54762 984 aa10.82□□□□□ -0.68
RNF4-212ENST00000509258 AP1B1Q10567 949 aa10.82□□□□□ -0.68
RNF4-212ENST00000509258 TRA2AQ13595 282 aaKnown RBP eCLIP10.82□□□□□ -0.68
RNF4-212ENST00000509258 NR1D2Q14995 579 aa10.82□□□□□ -0.68
RNF4-212ENST00000509258 C16orf72Q14CZ0 275 aa10.82□□□□□ -0.68
RNF4-212ENST00000509258 HENMT1Q5T8I9 393 aaKnown RBP10.82□□□□□ -0.68
RNF4-212ENST00000509258 NKAIN2Q5VXU1 208 aa10.82□□□□□ -0.68
RNF4-212ENST00000509258 SARM1Q6SZW1 724 aa10.82□□□□□ -0.68
RNF4-212ENST00000509258 ATG14Q6ZNE5 492 aa10.82□□□□□ -0.68
RNF4-212ENST00000509258 ZNF765Q7L2R6 523 aa10.82□□□□□ -0.68
RNF4-212ENST00000509258 RFX6Q8HWS3 928 aa10.82□□□□□ -0.68
RNF4-212ENST00000509258 MAP7D3Q8IWC1 876 aa10.82□□□□□ -0.68
RNF4-212ENST00000509258 KRT35Q92764 455 aa10.82□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 6.6 ms