RNA–Protein interactions for RNA: ENST00000508852.5

CCHCR1-227, Transcript of coiled-coil alpha-helical rod protein 1, humanhuman

TSL 4

Gene CCHCR1, Length 589 nt, Biotype nonsense mediated decay.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCHCR1-227ENST00000508852 SLC38A3Q99624 504 aa13.5□□□□□ -0.25
CCHCR1-227ENST00000508852 ZSCAN5AQ9BUG6 496 aa13.5□□□□□ -0.25
CCHCR1-227ENST00000508852 RIOK2Q9BVS4 552 aaKnown RBP13.5□□□□□ -0.25
CCHCR1-227ENST00000508852 CARD9Q9H257 536 aa13.5□□□□□ -0.25
CCHCR1-227ENST00000508852 SEMA6CQ9H3T2 930 aa13.5□□□□□ -0.25
CCHCR1-227ENST00000508852 ZFYVE1Q9HBF4 777 aa13.5□□□□□ -0.25
CCHCR1-227ENST00000508852 ZNHIT2Q9UHR6 403 aa13.5□□□□□ -0.25
CCHCR1-227ENST00000508852 HELZ2Q9BYK8 2649 aaKnown RBP13.49□□□□□ -0.25
CCHCR1-227ENST00000508852 IGHV1OR21-1A0A087WYE8 117 aa13.49□□□□□ -0.25
CCHCR1-227ENST00000508852 KIR2DS5A0A0G2JLQ3 304 aa13.49□□□□□ -0.25
CCHCR1-227ENST00000508852 PRAMEF33A0A0G2JMD5 474 aa13.49□□□□□ -0.25
CCHCR1-227ENST00000508852 A0A0G2JNG1 304 aa13.49□□□□□ -0.25
CCHCR1-227ENST00000508852 IGHV5-10-1A0A0J9YXX1 117 aa13.49□□□□□ -0.25
CCHCR1-227ENST00000508852 PMS2P1A4D2B8 440 aa13.49□□□□□ -0.25
CCHCR1-227ENST00000508852 KIR2DS3K7RE56 304 aa13.49□□□□□ -0.25
CCHCR1-227ENST00000508852 MTSS1O43312 755 aa13.49□□□□□ -0.25
CCHCR1-227ENST00000508852 PRAMEF10O60809 474 aa13.49□□□□□ -0.25
CCHCR1-227ENST00000508852 C1QL1O75973 258 aa13.49□□□□□ -0.25
CCHCR1-227ENST00000508852 PRB1P04280 392 aa13.49□□□□□ -0.25
CCHCR1-227ENST00000508852 HGFP14210 728 aa13.49□□□□□ -0.25
CCHCR1-227ENST00000508852 CD86P42081 329 aa13.49□□□□□ -0.25
CCHCR1-227ENST00000508852 CLCNKAP51800 687 aa13.49□□□□□ -0.25
CCHCR1-227ENST00000508852 EPHA4P54764 986 aa13.49□□□□□ -0.25
CCHCR1-227ENST00000508852 TAS2R40P59535 323 aa13.49□□□□□ -0.25
CCHCR1-227ENST00000508852 DCDC1P59894 354 aa13.49□□□□□ -0.25
CCHCR1-227ENST00000508852 AP1B1Q10567 949 aa13.49□□□□□ -0.25
CCHCR1-227ENST00000508852 TFDP2Q14188 446 aa13.49□□□□□ -0.25
CCHCR1-227ENST00000508852 KIR2DS5Q14953 304 aa13.49□□□□□ -0.25
CCHCR1-227ENST00000508852 QPCTQ16769 361 aa13.49□□□□□ -0.25
CCHCR1-227ENST00000508852 SLC9A4Q6AI14 798 aa13.49□□□□□ -0.25
CCHCR1-227ENST00000508852 WDR74Q6RFH5 385 aaPredicted RBP13.49□□□□□ -0.25
CCHCR1-227ENST00000508852 PCSK4Q6UW60 755 aa13.49□□□□□ -0.25
CCHCR1-227ENST00000508852 LYSMD3Q7Z3D4 306 aa13.49□□□□□ -0.25
CCHCR1-227ENST00000508852 CNGA4Q8IV77 575 aa13.49□□□□□ -0.25
CCHCR1-227ENST00000508852 RHOT1Q8IXI2 618 aa13.49□□□□□ -0.25
CCHCR1-227ENST00000508852 SFRP1Q8N474 314 aa13.49□□□□□ -0.25
CCHCR1-227ENST00000508852 ZPBPQ9BS86 351 aa13.49□□□□□ -0.25
CCHCR1-227ENST00000508852 DDA1Q9BW61 102 aa13.49□□□□□ -0.25
CCHCR1-227ENST00000508852 ZMYND15Q9H091 742 aa13.49□□□□□ -0.25
CCHCR1-227ENST00000508852 SLC25A51Q9H1U9 297 aa13.49□□□□□ -0.25
CCHCR1-227ENST00000508852 RDH14Q9HBH5 336 aa13.49□□□□□ -0.25
CCHCR1-227ENST00000508852 MAGEE1Q9HCI5 957 aa13.49□□□□□ -0.25
CCHCR1-227ENST00000508852 SARS2Q9NP81 518 aaKnown RBP13.49□□□□□ -0.25
CCHCR1-227ENST00000508852 ABHD10Q9NUJ1 306 aa13.49□□□□□ -0.25
CCHCR1-227ENST00000508852 WDR70Q9NW82 654 aa13.49□□□□□ -0.25
CCHCR1-227ENST00000508852 NFKBIL1Q9UBC1 381 aaPredicted RBP13.49□□□□□ -0.25
CCHCR1-227ENST00000508852 TMEM98Q9Y2Y6 226 aa13.49□□□□□ -0.25
CCHCR1-227ENST00000508852 HEY1Q9Y5J3 304 aa13.49□□□□□ -0.25
CCHCR1-227ENST00000508852 AHCTF1Q8WYP5 2266 aa13.49□□□□□ -0.25
CCHCR1-227ENST00000508852 ATMQ13315 3056 aa13.48□□□□□ -0.25
CCHCR1-227ENST00000508852 B4E171 279 aa13.48□□□□□ -0.25
CCHCR1-227ENST00000508852 CASC3O15234 703 aaKnown RBP13.48□□□□□ -0.25
CCHCR1-227ENST00000508852 PPM1DO15297 605 aa13.48□□□□□ -0.25
CCHCR1-227ENST00000508852 INPP4BO15327 924 aa13.48□□□□□ -0.25
CCHCR1-227ENST00000508852 CAPN5O15484 640 aaPredicted RBP13.48□□□□□ -0.25
CCHCR1-227ENST00000508852 DNAJC6O75061 913 aa13.48□□□□□ -0.25
CCHCR1-227ENST00000508852 ITIH1P19827 911 aa13.48□□□□□ -0.25
CCHCR1-227ENST00000508852 TSPAN7P41732 249 aa13.48□□□□□ -0.25
CCHCR1-227ENST00000508852 PPM1FP49593 454 aaPredicted RBP13.48□□□□□ -0.25
CCHCR1-227ENST00000508852 NIPAL4Q0D2K0 466 aa13.48□□□□□ -0.25
CCHCR1-227ENST00000508852 SLC10A2Q12908 348 aaPredicted RBP13.48□□□□□ -0.25
CCHCR1-227ENST00000508852 TCEAL1Q15170 157 aa13.48□□□□□ -0.25
CCHCR1-227ENST00000508852 ZNF569Q5MCW4 686 aa13.48□□□□□ -0.25
CCHCR1-227ENST00000508852 ZDHHC20Q5W0Z9 365 aa13.48□□□□□ -0.25
CCHCR1-227ENST00000508852 MARK2Q7KZI7 788 aaKnown RBP13.48□□□□□ -0.25
CCHCR1-227ENST00000508852 DTX1Q86Y01 620 aa13.48□□□□□ -0.25
CCHCR1-227ENST00000508852 PHYKPLQ8IUZ5 450 aa13.48□□□□□ -0.25
CCHCR1-227ENST00000508852 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP13.48□□□□□ -0.25
CCHCR1-227ENST00000508852 RAPGEF5Q92565 580 aa13.48□□□□□ -0.25
CCHCR1-227ENST00000508852 IMP4Q96G21 291 aaKnown RBP13.48□□□□□ -0.25
CCHCR1-227ENST00000508852 CCDC74BQ96LY2 380 aa13.48□□□□□ -0.25
CCHCR1-227ENST00000508852 NUDT22Q9BRQ3 303 aa13.48□□□□□ -0.25
CCHCR1-227ENST00000508852 ARHGAP9Q9BRR9 750 aa13.48□□□□□ -0.25
CCHCR1-227ENST00000508852 EFHD1Q9BUP0 239 aa13.48□□□□□ -0.25
CCHCR1-227ENST00000508852 NHEJ1Q9H9Q4 299 aaPredicted RBP13.48□□□□□ -0.25
CCHCR1-227ENST00000508852 TRIM39Q9HCM9 518 aa13.48□□□□□ -0.25
CCHCR1-227ENST00000508852 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP13.48□□□□□ -0.25
CCHCR1-227ENST00000508852 PDP2Q9P2J9 529 aa13.48□□□□□ -0.25
CCHCR1-227ENST00000508852 B8ZZF3 427 aa13.47□□□□□ -0.25
CCHCR1-227ENST00000508852 C9orf172C9J069 976 aa13.47□□□□□ -0.25
CCHCR1-227ENST00000508852 KCNK1O00180 336 aa13.47□□□□□ -0.25
CCHCR1-227ENST00000508852 EFSO43281 561 aa13.47□□□□□ -0.25
CCHCR1-227ENST00000508852 GRID2O43424 1007 aa13.47□□□□□ -0.25
CCHCR1-227ENST00000508852 NUAK1O60285 661 aa13.47□□□□□ -0.25
CCHCR1-227ENST00000508852 MAP3K6O95382 1288 aa13.47□□□□□ -0.25
CCHCR1-227ENST00000508852 THRAP10827 490 aa13.47□□□□□ -0.25
CCHCR1-227ENST00000508852 NOP2P46087 812 aaKnown RBP13.47□□□□□ -0.25
CCHCR1-227ENST00000508852 HHEXQ03014 270 aa13.47□□□□□ -0.25
CCHCR1-227ENST00000508852 CDK18Q07002 472 aa13.47□□□□□ -0.25
CCHCR1-227ENST00000508852 C16orf72Q14CZ0 275 aa13.47□□□□□ -0.25
CCHCR1-227ENST00000508852 CHCHD2P9Q5T1J5 151 aaPredicted RBP13.47□□□□□ -0.25
CCHCR1-227ENST00000508852 DCAF12Q5T6F0 453 aa13.47□□□□□ -0.25
CCHCR1-227ENST00000508852 IYDQ6PHW0 289 aa13.47□□□□□ -0.25
CCHCR1-227ENST00000508852 ZNF574Q6ZN55 896 aaPredicted RBP13.47□□□□□ -0.25
CCHCR1-227ENST00000508852 CHST15Q7LFX5 561 aaPredicted RBP13.47□□□□□ -0.25
CCHCR1-227ENST00000508852 VSTM4Q8IW00 320 aa13.47□□□□□ -0.25
CCHCR1-227ENST00000508852 SFTPA2Q8IWL1 248 aa13.47□□□□□ -0.25
CCHCR1-227ENST00000508852 TRAM1L1Q8N609 369 aa13.47□□□□□ -0.25
CCHCR1-227ENST00000508852 PLD5Q8N7P1 536 aa13.47□□□□□ -0.25
CCHCR1-227ENST00000508852 SLC37A2Q8TED4 501 aa13.47□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 41.8 ms