RNA–Protein interactions for RNA: ENST00000508809.1

COL4A3BP-206, Transcript of collagen type IV alpha 3 binding protein, humanhuman

TSL 2

Gene COL4A3BP, Length 693 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A3BP-206ENST00000508809 HMCESQ96FZ2 354 aa8.64□□□□□ -1.03
COL4A3BP-206ENST00000508809 WDR92Q96MX6 357 aa8.64□□□□□ -1.03
COL4A3BP-206ENST00000508809 ZNF641Q96N77 438 aaPredicted RBP8.64□□□□□ -1.03
COL4A3BP-206ENST00000508809 CMKLR1Q99788 373 aa8.64□□□□□ -1.03
COL4A3BP-206ENST00000508809 WRAP53Q9BUR4 548 aaKnown RBP8.64□□□□□ -1.03
COL4A3BP-206ENST00000508809 STK33Q9BYT3 514 aa8.64□□□□□ -1.03
COL4A3BP-206ENST00000508809 TRIM4Q9C037 500 aa8.64□□□□□ -1.03
COL4A3BP-206ENST00000508809 KLC2Q9H0B6 622 aa8.64□□□□□ -1.03
COL4A3BP-206ENST00000508809 SLC25A18Q9H1K4 315 aa8.64□□□□□ -1.03
COL4A3BP-206ENST00000508809 SYNDIG1Q9H7V2 258 aa8.64□□□□□ -1.03
COL4A3BP-206ENST00000508809 PCDH12Q9NPG4 1184 aa8.64□□□□□ -1.03
COL4A3BP-206ENST00000508809 SEPT10Q9P0V9 454 aa8.64□□□□□ -1.03
COL4A3BP-206ENST00000508809 LHX3Q9UBR4 397 aa8.64□□□□□ -1.03
COL4A3BP-206ENST00000508809 KLQ9UEF7 1012 aa8.64□□□□□ -1.03
COL4A3BP-206ENST00000508809 PISDQ9UG56 409 aa8.64□□□□□ -1.03
COL4A3BP-206ENST00000508809 ADGRE2Q9UHX3 823 aa8.64□□□□□ -1.03
COL4A3BP-206ENST00000508809 COQ6Q9Y2Z9 468 aa8.64□□□□□ -1.03
COL4A3BP-206ENST00000508809 DAAM1Q9Y4D1 1078 aa8.64□□□□□ -1.03
COL4A3BP-206ENST00000508809 FHOD1Q9Y613 1164 aa8.64□□□□□ -1.03
COL4A3BP-206ENST00000508809 RNF215Q9Y6U7 377 aa8.64□□□□□ -1.03
COL4A3BP-206ENST00000508809 USP9YO00507 2555 aaPredicted RBP8.63□□□□□ -1.03
COL4A3BP-206ENST00000508809 PRAMEF33A0A0G2JMD5 474 aa8.63□□□□□ -1.03
COL4A3BP-206ENST00000508809 FAM221AA4D161 298 aa8.63□□□□□ -1.03
COL4A3BP-206ENST00000508809 TMEM202A6NGA9 273 aa8.63□□□□□ -1.03
COL4A3BP-206ENST00000508809 B4GAT1O43505 415 aa8.63□□□□□ -1.03
COL4A3BP-206ENST00000508809 NUDT21O43809 227 aaKnown RBP8.63□□□□□ -1.03
COL4A3BP-206ENST00000508809 BUB1BO60566 1050 aaPredicted RBP8.63□□□□□ -1.03
COL4A3BP-206ENST00000508809 PRAMEF10O60809 474 aa8.63□□□□□ -1.03
COL4A3BP-206ENST00000508809 UCHL3P15374 230 aa8.63□□□□□ -1.03
COL4A3BP-206ENST00000508809 CHRNB2P17787 502 aa8.63□□□□□ -1.03
COL4A3BP-206ENST00000508809 SDC4P31431 198 aa8.63□□□□□ -1.03
COL4A3BP-206ENST00000508809 MMP12P39900 470 aa8.63□□□□□ -1.03
COL4A3BP-206ENST00000508809 KIR3DL1P43629 444 aa8.63□□□□□ -1.03
COL4A3BP-206ENST00000508809 GSCP56915 257 aaPredicted RBP8.63□□□□□ -1.03
COL4A3BP-206ENST00000508809 KIAA1024LP59773 190 aa8.63□□□□□ -1.03
COL4A3BP-206ENST00000508809 RHOAP61586 193 aa8.63□□□□□ -1.03
COL4A3BP-206ENST00000508809 NFKB2Q00653 900 aa8.63□□□□□ -1.03
COL4A3BP-206ENST00000508809 B4GALNT1Q00973 533 aa8.63□□□□□ -1.03
COL4A3BP-206ENST00000508809 SERINC3Q13530 473 aa8.63□□□□□ -1.03
COL4A3BP-206ENST00000508809 NR1D2Q14995 579 aa8.63□□□□□ -1.03
COL4A3BP-206ENST00000508809 CLPPQ16740 277 aaPredicted RBP8.63□□□□□ -1.03
COL4A3BP-206ENST00000508809 CDO1Q16878 200 aa8.63□□□□□ -1.03
COL4A3BP-206ENST00000508809 C14orf28Q4W4Y0 310 aa8.63□□□□□ -1.03
COL4A3BP-206ENST00000508809 NAA35Q5VZE5 725 aa8.63□□□□□ -1.03
COL4A3BP-206ENST00000508809 BRAT1Q6PJG6 821 aa8.63□□□□□ -1.03
COL4A3BP-206ENST00000508809 ZNF574Q6ZN55 896 aaPredicted RBP8.63□□□□□ -1.03
COL4A3BP-206ENST00000508809 DNAAF5Q86Y56 855 aa8.63□□□□□ -1.03
COL4A3BP-206ENST00000508809 UMODL1-AS1Q8N2C9 162 aa8.63□□□□□ -1.03
COL4A3BP-206ENST00000508809 CCDC185Q8N715 623 aa8.63□□□□□ -1.03
COL4A3BP-206ENST00000508809 Q8N9G6 341 aaPredicted RBP8.63□□□□□ -1.03
COL4A3BP-206ENST00000508809 MLKLQ8NB16 471 aa8.63□□□□□ -1.03
COL4A3BP-206ENST00000508809 NETO2Q8NC67 525 aa8.63□□□□□ -1.03
COL4A3BP-206ENST00000508809 FAM13CQ8NE31 585 aa8.63□□□□□ -1.03
COL4A3BP-206ENST00000508809 JOSD2Q8TAC2 188 aa8.63□□□□□ -1.03
COL4A3BP-206ENST00000508809 GPT2Q8TD30 523 aa8.63□□□□□ -1.03
COL4A3BP-206ENST00000508809 OR1E3Q8WZA6 343 aa8.63□□□□□ -1.03
COL4A3BP-206ENST00000508809 FUBP1Q96AE4 644 aaKnown RBP8.63□□□□□ -1.03
COL4A3BP-206ENST00000508809 PDXPQ96GD0 296 aa8.63□□□□□ -1.03
COL4A3BP-206ENST00000508809 DPH2Q9BQC3 489 aaPredicted RBP8.63□□□□□ -1.03
COL4A3BP-206ENST00000508809 SLC12A9Q9BXP2 914 aa8.63□□□□□ -1.03
COL4A3BP-206ENST00000508809 METTL5Q9NRN9 209 aaKnown RBP8.63□□□□□ -1.03
COL4A3BP-206ENST00000508809 FOXJ2Q9P0K8 574 aa8.63□□□□□ -1.03
COL4A3BP-206ENST00000508809 LRIT1Q9P2V4 623 aa8.63□□□□□ -1.03
COL4A3BP-206ENST00000508809 OR1A2Q9Y585 309 aa8.63□□□□□ -1.03
COL4A3BP-206ENST00000508809 ZFC3H1O60293 1989 aaKnown RBP8.62□□□□□ -1.03
COL4A3BP-206ENST00000508809 RP1L1Q8IWN7 2480 aaPredicted RBP8.62□□□□□ -1.03
COL4A3BP-206ENST00000508809 RASA4BC9J798 803 aa8.62□□□□□ -1.03
COL4A3BP-206ENST00000508809 F8VZ95 297 aa8.62□□□□□ -1.03
COL4A3BP-206ENST00000508809 RASA4O43374 803 aa8.62□□□□□ -1.03
COL4A3BP-206ENST00000508809 PPFIA2O75334 1257 aa8.62□□□□□ -1.03
COL4A3BP-206ENST00000508809 PIGNO95427 931 aa8.62□□□□□ -1.03
COL4A3BP-206ENST00000508809 CPNE6O95741 557 aa8.62□□□□□ -1.03
COL4A3BP-206ENST00000508809 XPAP23025 273 aaPredicted RBP8.62□□□□□ -1.03
COL4A3BP-206ENST00000508809 RFC1P35251 1148 aaPredicted RBP8.62□□□□□ -1.03
COL4A3BP-206ENST00000508809 CSNK1DP48730 415 aa8.62□□□□□ -1.03
COL4A3BP-206ENST00000508809 FMO1Q01740 532 aa8.62□□□□□ -1.03
COL4A3BP-206ENST00000508809 CDR2Q01850 454 aa8.62□□□□□ -1.03
COL4A3BP-206ENST00000508809 PTP4A2Q12974 167 aa8.62□□□□□ -1.03
COL4A3BP-206ENST00000508809 IKZF1Q13422 519 aa8.62□□□□□ -1.03
COL4A3BP-206ENST00000508809 SQSTM1Q13501 440 aa8.62□□□□□ -1.03
COL4A3BP-206ENST00000508809 RAPGEF1Q13905 1077 aa8.62□□□□□ -1.03
COL4A3BP-206ENST00000508809 CLCA4Q14CN2 919 aa8.62□□□□□ -1.03
COL4A3BP-206ENST00000508809 TCEA2Q15560 299 aa8.62□□□□□ -1.03
COL4A3BP-206ENST00000508809 PARP15Q460N3 678 aa8.62□□□□□ -1.03
COL4A3BP-206ENST00000508809 AFMIDQ63HM1 303 aa8.62□□□□□ -1.03
COL4A3BP-206ENST00000508809 ERAP2Q6P179 960 aa8.62□□□□□ -1.03
COL4A3BP-206ENST00000508809 WDR59Q6PJI9 974 aa8.62□□□□□ -1.03
COL4A3BP-206ENST00000508809 TAF8Q7Z7C8 310 aa8.62□□□□□ -1.03
COL4A3BP-206ENST00000508809 SLFN11Q7Z7L1 901 aa8.62□□□□□ -1.03
COL4A3BP-206ENST00000508809 VASH2Q86V25 355 aa8.62□□□□□ -1.03
COL4A3BP-206ENST00000508809 ZSWIM9Q86XI8 627 aa8.62□□□□□ -1.03
COL4A3BP-206ENST00000508809 SFTPA2Q8IWL1 248 aa8.62□□□□□ -1.03
COL4A3BP-206ENST00000508809 PYROXD2Q8N2H3 581 aa8.62□□□□□ -1.03
COL4A3BP-206ENST00000508809 PLA2G15Q8NCC3 412 aa8.62□□□□□ -1.03
COL4A3BP-206ENST00000508809 FAM46DQ8NEK8 389 aa8.62□□□□□ -1.03
COL4A3BP-206ENST00000508809 OR56A4Q8NGH8 313 aa8.62□□□□□ -1.03
COL4A3BP-206ENST00000508809 FAM172AQ8WUF8 416 aa8.62□□□□□ -1.03
COL4A3BP-206ENST00000508809 ECHDC3Q96DC8 303 aa8.62□□□□□ -1.03
COL4A3BP-206ENST00000508809 TUBGCP5Q96RT8 1024 aa8.62□□□□□ -1.03
COL4A3BP-206ENST00000508809 TUBGCP2Q9BSJ2 902 aa8.62□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 47.7 ms