RNA–Protein interactions for RNA: ENST00000508668.1

HMGN1P11-201, Transcript of high mobility group nucleosome binding domain 1 pseudogene 11, humanhuman

BASIC

Gene HMGN1P11, Length 303 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1P11-201ENST00000508668 OBSL1O75147 1896 aa3.83□□□□□ -1.8
HMGN1P11-201ENST00000508668 MYO16Q9Y6X6 1858 aa3.83□□□□□ -1.8
HMGN1P11-201ENST00000508668 DENND4CQ5VZ89 1909 aa3.83□□□□□ -1.8
HMGN1P11-201ENST00000508668 CNOT1A5YKK6 2376 aaKnown RBP3.83□□□□□ -1.8
HMGN1P11-201ENST00000508668 VPS13AQ96RL7 3174 aa3.83□□□□□ -1.8
HMGN1P11-201ENST00000508668 NUP205Q92621 2012 aa3.82□□□□□ -1.8
HMGN1P11-201ENST00000508668 PRSS38A1L453 326 aa3.82□□□□□ -1.8
HMGN1P11-201ENST00000508668 CPED1A4D0V7 1026 aa3.82□□□□□ -1.8
HMGN1P11-201ENST00000508668 TRIM49BA6NDI0 452 aa3.82□□□□□ -1.8
HMGN1P11-201ENST00000508668 A6NNZ2 444 aa3.82□□□□□ -1.8
HMGN1P11-201ENST00000508668 E5RJQ4 531 aa3.82□□□□□ -1.8
HMGN1P11-201ENST00000508668 GOLGA8SH3BPF8 625 aa3.82□□□□□ -1.8
HMGN1P11-201ENST00000508668 TMX2-CTNND1H3BSU7 103 aa3.82□□□□□ -1.8
HMGN1P11-201ENST00000508668 PLK4O00444 970 aa3.82□□□□□ -1.8
HMGN1P11-201ENST00000508668 MCF2LO15068 1137 aa3.82□□□□□ -1.8
HMGN1P11-201ENST00000508668 GRAP2O75791 330 aa3.82□□□□□ -1.8
HMGN1P11-201ENST00000508668 ENDOD1O94919 500 aa3.82□□□□□ -1.8
HMGN1P11-201ENST00000508668 LPLP06858 475 aa3.82□□□□□ -1.8
HMGN1P11-201ENST00000508668 ANXA6P08133 673 aa3.82□□□□□ -1.8
HMGN1P11-201ENST00000508668 HNRNPA2B1P22626 353 aaKnown RBP3.82□□□□□ -1.8
HMGN1P11-201ENST00000508668 EPHA8P29322 1005 aaPredicted RBP3.82□□□□□ -1.8
HMGN1P11-201ENST00000508668 SDC4P31431 198 aa3.82□□□□□ -1.8
HMGN1P11-201ENST00000508668 CHRNA3P32297 505 aa3.82□□□□□ -1.8
HMGN1P11-201ENST00000508668 NSFP46459 744 aaKnown RBP3.82□□□□□ -1.8
HMGN1P11-201ENST00000508668 PGFP49763 221 aa3.82□□□□□ -1.8
HMGN1P11-201ENST00000508668 NEK3P51956 506 aa3.82□□□□□ -1.8
HMGN1P11-201ENST00000508668 ADPRHP54922 357 aa3.82□□□□□ -1.8
HMGN1P11-201ENST00000508668 MANFP55145 182 aaKnown RBP3.82□□□□□ -1.8
HMGN1P11-201ENST00000508668 TMPRSS3P57727 454 aa3.82□□□□□ -1.8
HMGN1P11-201ENST00000508668 NXPH1P58417 271 aa3.82□□□□□ -1.8
HMGN1P11-201ENST00000508668 SNRPD1P62314 119 aaKnown RBP3.82□□□□□ -1.8
HMGN1P11-201ENST00000508668 TPM4P67936 248 aa3.82□□□□□ -1.8
HMGN1P11-201ENST00000508668 CXADRP78310 365 aa3.82□□□□□ -1.8
HMGN1P11-201ENST00000508668 FAM193AP78312 1265 aa3.82□□□□□ -1.8
HMGN1P11-201ENST00000508668 SLC20A2Q08357 652 aa3.82□□□□□ -1.8
HMGN1P11-201ENST00000508668 TARDBPQ13148 414 aaKnown RBP eCLIP3.82□□□□□ -1.8
HMGN1P11-201ENST00000508668 PDCLQ13371 301 aa3.82□□□□□ -1.8
HMGN1P11-201ENST00000508668 ENPP2Q13822 863 aa3.82□□□□□ -1.8
HMGN1P11-201ENST00000508668 PKP1Q13835 747 aa3.82□□□□□ -1.8
HMGN1P11-201ENST00000508668 USP10Q14694 798 aaKnown RBP3.82□□□□□ -1.8
HMGN1P11-201ENST00000508668 DLG2Q15700 870 aa3.82□□□□□ -1.8
HMGN1P11-201ENST00000508668 MEA1Q16626 185 aa3.82□□□□□ -1.8
HMGN1P11-201ENST00000508668 COBLL1Q53SF7 1204 aa3.82□□□□□ -1.8
HMGN1P11-201ENST00000508668 BRMS1LQ5PSV4 323 aa3.82□□□□□ -1.8
HMGN1P11-201ENST00000508668 PRAMEF14Q5SWL7 426 aa3.82□□□□□ -1.8
HMGN1P11-201ENST00000508668 FAM102AQ5T9C2 384 aaPredicted RBP3.82□□□□□ -1.8
HMGN1P11-201ENST00000508668 FAXCQ5TGI0 409 aa3.82□□□□□ -1.8
HMGN1P11-201ENST00000508668 HES3Q5TGS1 186 aa3.82□□□□□ -1.8
HMGN1P11-201ENST00000508668 KIAA1161Q6NSJ0 714 aa3.82□□□□□ -1.8
HMGN1P11-201ENST00000508668 PPP1R2P3Q6NXS1 205 aa3.82□□□□□ -1.8
HMGN1P11-201ENST00000508668 ERAP2Q6P179 960 aa3.82□□□□□ -1.8
HMGN1P11-201ENST00000508668 KDM7AQ6ZMT4 941 aa3.82□□□□□ -1.8
HMGN1P11-201ENST00000508668 LARP4Q71RC2 724 aaKnown RBP eCLIP3.82□□□□□ -1.8
HMGN1P11-201ENST00000508668 BEND5Q7L4P6 421 aa3.82□□□□□ -1.8
HMGN1P11-201ENST00000508668 SETD3Q86TU7 594 aaPredicted RBP3.82□□□□□ -1.8
HMGN1P11-201ENST00000508668 TAC4Q86UU9 113 aa3.82□□□□□ -1.8
HMGN1P11-201ENST00000508668 FAM217AQ8IXS0 508 aa3.82□□□□□ -1.8
HMGN1P11-201ENST00000508668 DEFB106AQ8N104 65 aa3.82□□□□□ -1.8
HMGN1P11-201ENST00000508668 LGI4Q8N135 537 aa3.82□□□□□ -1.8
HMGN1P11-201ENST00000508668 BCL6BQ8N143 479 aaPredicted RBP3.82□□□□□ -1.8
HMGN1P11-201ENST00000508668 NDUFAF2Q8N183 169 aa3.82□□□□□ -1.8
HMGN1P11-201ENST00000508668 BBS5Q8N3I7 341 aa3.82□□□□□ -1.8
HMGN1P11-201ENST00000508668 CNTD1Q8N815 330 aa3.82□□□□□ -1.8
HMGN1P11-201ENST00000508668 MLKLQ8NB16 471 aa3.82□□□□□ -1.8
HMGN1P11-201ENST00000508668 ZNF248Q8NDW4 579 aa3.82□□□□□ -1.8
HMGN1P11-201ENST00000508668 CXorf40AQ8TE69 158 aa3.82□□□□□ -1.8
HMGN1P11-201ENST00000508668 NSMCE1Q8WV22 266 aa3.82□□□□□ -1.8
HMGN1P11-201ENST00000508668 SLC35F5Q8WV83 523 aa3.82□□□□□ -1.8
HMGN1P11-201ENST00000508668 KCNE4Q8WWG9 221 aa3.82□□□□□ -1.8
HMGN1P11-201ENST00000508668 ZNF606Q8WXB4 792 aa3.82□□□□□ -1.8
HMGN1P11-201ENST00000508668 FGF11Q92914 225 aa3.82□□□□□ -1.8
HMGN1P11-201ENST00000508668 GRAMD1AQ96CP6 724 aa3.82□□□□□ -1.8
HMGN1P11-201ENST00000508668 C18orf8Q96DM3 657 aa3.82□□□□□ -1.8
HMGN1P11-201ENST00000508668 MYOCQ99972 504 aa3.82□□□□□ -1.8
HMGN1P11-201ENST00000508668 CRACR2AQ9BSW2 395 aa3.82□□□□□ -1.8
HMGN1P11-201ENST00000508668 STRADBQ9C0K7 418 aa3.82□□□□□ -1.8
HMGN1P11-201ENST00000508668 TKTL2Q9H0I9 626 aa3.82□□□□□ -1.8
HMGN1P11-201ENST00000508668 ZDHHC6Q9H6R6 413 aa3.82□□□□□ -1.8
HMGN1P11-201ENST00000508668 CD93Q9NPY3 652 aa3.82□□□□□ -1.8
HMGN1P11-201ENST00000508668 ASNSD1Q9NWL6 643 aa3.82□□□□□ -1.8
HMGN1P11-201ENST00000508668 SEPT10Q9P0V9 454 aa3.82□□□□□ -1.8
HMGN1P11-201ENST00000508668 SPASTQ9UBP0 616 aa3.82□□□□□ -1.8
HMGN1P11-201ENST00000508668 IL36AQ9UHA7 158 aa3.82□□□□□ -1.8
HMGN1P11-201ENST00000508668 DNAI1Q9UI46 699 aa3.82□□□□□ -1.8
HMGN1P11-201ENST00000508668 RWDD2AQ9UIY3 292 aa3.82□□□□□ -1.8
HMGN1P11-201ENST00000508668 STOML2Q9UJZ1 356 aa3.82□□□□□ -1.8
HMGN1P11-201ENST00000508668 RALYQ9UKM9 306 aaKnown RBP3.82□□□□□ -1.8
HMGN1P11-201ENST00000508668 EDARQ9UNE0 448 aa3.82□□□□□ -1.8
HMGN1P11-201ENST00000508668 COQ4Q9Y3A0 265 aa3.82□□□□□ -1.8
HMGN1P11-201ENST00000508668 DUSP10Q9Y6W6 482 aa3.82□□□□□ -1.8
HMGN1P11-201ENST00000508668 CACNA1GO43497 2377 aa3.82□□□□□ -1.8
HMGN1P11-201ENST00000508668 ABCA7Q8IZY2 2146 aa3.82□□□□□ -1.8
HMGN1P11-201ENST00000508668 MYO15AQ9UKN7 3530 aa3.82□□□□□ -1.8
HMGN1P11-201ENST00000508668 DMXL1Q9Y485 3027 aa3.81□□□□□ -1.8
HMGN1P11-201ENST00000508668 MAP1BP46821 2468 aaKnown RBP3.81□□□□□ -1.8
HMGN1P11-201ENST00000508668 FAM237AA0A1B0GTK4 181 aa3.81□□□□□ -1.8
HMGN1P11-201ENST00000508668 ANTXRLA6NF34 631 aa3.81□□□□□ -1.8
HMGN1P11-201ENST00000508668 ZSCAN5CA6NGD5 496 aaPredicted RBP3.81□□□□□ -1.8
HMGN1P11-201ENST00000508668 TULP2O00295 520 aa3.81□□□□□ -1.8
HMGN1P11-201ENST00000508668 PMM2O15305 246 aa3.81□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms