RNA–Protein interactions for RNA: ENST00000508597.1

HMGB1P44-201, Transcript of high mobility group box 1 pseudogene 44, humanhuman

BASIC

Gene HMGB1P44, Length 572 nt, Biotype processed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P44-201ENST00000508597 HAUS1Q96CS2 278 aa5.57□□□□□ -1.52
HMGB1P44-201ENST00000508597 HDAC11Q96DB2 347 aa5.57□□□□□ -1.52
HMGB1P44-201ENST00000508597 CHFRQ96EP1 664 aa5.57□□□□□ -1.52
HMGB1P44-201ENST00000508597 MYEOVQ96EZ4 313 aa5.57□□□□□ -1.52
HMGB1P44-201ENST00000508597 ALG14Q96F25 216 aa5.57□□□□□ -1.52
HMGB1P44-201ENST00000508597 ZNF599Q96NL3 588 aa5.57□□□□□ -1.52
HMGB1P44-201ENST00000508597 TSGA13Q96PP4 275 aa5.57□□□□□ -1.52
HMGB1P44-201ENST00000508597 NAPGQ99747 312 aaPredicted RBP5.57□□□□□ -1.52
HMGB1P44-201ENST00000508597 MENTQ9BUN1 341 aa5.57□□□□□ -1.52
HMGB1P44-201ENST00000508597 TUBB2BQ9BVA1 445 aa5.57□□□□□ -1.52
HMGB1P44-201ENST00000508597 TLR10Q9BXR5 811 aa5.57□□□□□ -1.52
HMGB1P44-201ENST00000508597 ACE2Q9BYF1 805 aaPredicted RBP5.57□□□□□ -1.52
HMGB1P44-201ENST00000508597 KRTAP4-2Q9BYR5 136 aa5.57□□□□□ -1.52
HMGB1P44-201ENST00000508597 ASPSCR1Q9BZE9 553 aa5.57□□□□□ -1.52
HMGB1P44-201ENST00000508597 KLC2Q9H0B6 622 aa5.57□□□□□ -1.52
HMGB1P44-201ENST00000508597 MFSD1Q9H3U5 465 aa5.57□□□□□ -1.52
HMGB1P44-201ENST00000508597 GOLPH3Q9H4A6 298 aa5.57□□□□□ -1.52
HMGB1P44-201ENST00000508597 LRRC19Q9H756 370 aa5.57□□□□□ -1.52
HMGB1P44-201ENST00000508597 TBC1D17Q9HA65 648 aa5.57□□□□□ -1.52
HMGB1P44-201ENST00000508597 LTB4R2Q9NPC1 389 aa5.57□□□□□ -1.52
HMGB1P44-201ENST00000508597 ABCB8Q9NUT2 735 aa5.57□□□□□ -1.52
HMGB1P44-201ENST00000508597 KLHL42Q9P2K6 505 aa5.57□□□□□ -1.52
HMGB1P44-201ENST00000508597 THAP10Q9P2Z0 257 aaPredicted RBP5.57□□□□□ -1.52
HMGB1P44-201ENST00000508597 SUN2Q9UH99 717 aa5.57□□□□□ -1.52
HMGB1P44-201ENST00000508597 DNAI1Q9UI46 699 aa5.57□□□□□ -1.52
HMGB1P44-201ENST00000508597 SLC25A13Q9UJS0 675 aa5.57□□□□□ -1.52
HMGB1P44-201ENST00000508597 VPS28Q9UK41 221 aa5.57□□□□□ -1.52
HMGB1P44-201ENST00000508597 TTC7AQ9ULT0 858 aaPredicted RBP5.57□□□□□ -1.52
HMGB1P44-201ENST00000508597 CA14Q9ULX7 337 aa5.57□□□□□ -1.52
HMGB1P44-201ENST00000508597 HS3ST2Q9Y278 367 aa5.57□□□□□ -1.52
HMGB1P44-201ENST00000508597 HYOU1Q9Y4L1 999 aa5.57□□□□□ -1.52
HMGB1P44-201ENST00000508597 OR51B4Q9Y5P0 310 aa5.57□□□□□ -1.52
HMGB1P44-201ENST00000508597 SNX10Q9Y5X0 201 aa5.57□□□□□ -1.52
HMGB1P44-201ENST00000508597 CKAP5Q14008 2032 aa5.57□□□□□ -1.52
HMGB1P44-201ENST00000508597 SHROOM3Q8TF72 1996 aa5.56□□□□□ -1.52
HMGB1P44-201ENST00000508597 CACNA1IQ9P0X4 2223 aa5.56□□□□□ -1.52
HMGB1P44-201ENST00000508597 MUC3AQ02505 3323 aa5.56□□□□□ -1.52
HMGB1P44-201ENST00000508597 TARSL2A2RTX5 802 aaKnown RBP5.56□□□□□ -1.52
HMGB1P44-201ENST00000508597 TMEM221A6NGB7 291 aa5.56□□□□□ -1.52
HMGB1P44-201ENST00000508597 SHISA7A6NL88 538 aa5.56□□□□□ -1.52
HMGB1P44-201ENST00000508597 USP27XA6NNY8 438 aa5.56□□□□□ -1.52
HMGB1P44-201ENST00000508597 RASA4BC9J798 803 aa5.56□□□□□ -1.52
HMGB1P44-201ENST00000508597 K7EQS6 105 aa5.56□□□□□ -1.52
HMGB1P44-201ENST00000508597 M0R296 226 aa5.56□□□□□ -1.52
HMGB1P44-201ENST00000508597 RASA4O43374 803 aa5.56□□□□□ -1.52
HMGB1P44-201ENST00000508597 CST8O60676 142 aa5.56□□□□□ -1.52
HMGB1P44-201ENST00000508597 PRAMEF11O60813 436 aa5.56□□□□□ -1.52
HMGB1P44-201ENST00000508597 ZMPSTE24O75844 475 aa5.56□□□□□ -1.52
HMGB1P44-201ENST00000508597 CD48P09326 243 aa5.56□□□□□ -1.52
HMGB1P44-201ENST00000508597 AOC1P19801 751 aa5.56□□□□□ -1.52
HMGB1P44-201ENST00000508597 CD70P32970 193 aa5.56□□□□□ -1.52
HMGB1P44-201ENST00000508597 HSPA9P38646 679 aaKnown RBP5.56□□□□□ -1.52
HMGB1P44-201ENST00000508597 CSKP41240 450 aa5.56□□□□□ -1.52
HMGB1P44-201ENST00000508597 GARSP41250 739 aaKnown RBP5.56□□□□□ -1.52
HMGB1P44-201ENST00000508597 RENBPP51606 427 aa5.56□□□□□ -1.52
HMGB1P44-201ENST00000508597 IL10RBQ08334 325 aa5.56□□□□□ -1.52
HMGB1P44-201ENST00000508597 NSUN2Q08J23 767 aaKnown RBP eCLIP5.56□□□□□ -1.52
HMGB1P44-201ENST00000508597 GALNT2Q10471 571 aa5.56□□□□□ -1.52
HMGB1P44-201ENST00000508597 KLF1Q13351 362 aaPredicted RBP5.56□□□□□ -1.52
HMGB1P44-201ENST00000508597 ENPP2Q13822 863 aa5.56□□□□□ -1.52
HMGB1P44-201ENST00000508597 HNRNPDQ14103 355 aaKnown RBP5.56□□□□□ -1.52
HMGB1P44-201ENST00000508597 GRM3Q14832 879 aa5.56□□□□□ -1.52
HMGB1P44-201ENST00000508597 UBXN2BQ14CS0 331 aa5.56□□□□□ -1.52
HMGB1P44-201ENST00000508597 GEN1Q17RS7 908 aa5.56□□□□□ -1.52
HMGB1P44-201ENST00000508597 FUT11Q495W5 492 aa5.56□□□□□ -1.52
HMGB1P44-201ENST00000508597 PITRM1Q5JRX3 1037 aa5.56□□□□□ -1.52
HMGB1P44-201ENST00000508597 EOGTQ5NDL2 527 aa5.56□□□□□ -1.52
HMGB1P44-201ENST00000508597 CCDC181Q5TID7 509 aa5.56□□□□□ -1.52
HMGB1P44-201ENST00000508597 NCBP2-AS2Q69YL0 99 aa5.56□□□□□ -1.52
HMGB1P44-201ENST00000508597 IL31Q6EBC2 164 aa5.56□□□□□ -1.52
HMGB1P44-201ENST00000508597 DRICH1Q6PGQ1 229 aaPredicted RBP5.56□□□□□ -1.52
HMGB1P44-201ENST00000508597 ADIPOR2Q86V24 386 aa5.56□□□□□ -1.52
HMGB1P44-201ENST00000508597 ZNF761Q86XN6 746 aaPredicted RBP5.56□□□□□ -1.52
HMGB1P44-201ENST00000508597 SLC13A5Q86YT5 568 aaPredicted RBP5.56□□□□□ -1.52
HMGB1P44-201ENST00000508597 ARHGAP12Q8IWW6 846 aa5.56□□□□□ -1.52
HMGB1P44-201ENST00000508597 ZZZ3Q8IYH5 903 aa5.56□□□□□ -1.52
HMGB1P44-201ENST00000508597 RASGEF1CQ8N431 466 aa5.56□□□□□ -1.52
HMGB1P44-201ENST00000508597 SPEM1Q8N4L4 309 aa5.56□□□□□ -1.52
HMGB1P44-201ENST00000508597 ATPAF2Q8N5M1 289 aa5.56□□□□□ -1.52
HMGB1P44-201ENST00000508597 PCDH20Q8N6Y1 951 aaKnown RBP5.56□□□□□ -1.52
HMGB1P44-201ENST00000508597 PQLC3Q8N755 202 aa5.56□□□□□ -1.52
HMGB1P44-201ENST00000508597 DTX3Q8N9I9 347 aa5.56□□□□□ -1.52
HMGB1P44-201ENST00000508597 PJA1Q8NG27 643 aa5.56□□□□□ -1.52
HMGB1P44-201ENST00000508597 TTC8Q8TAM2 541 aa5.56□□□□□ -1.52
HMGB1P44-201ENST00000508597 WFDC5Q8TCV5 224 aa5.56□□□□□ -1.52
HMGB1P44-201ENST00000508597 ACTRT1Q8TDG2 376 aa5.56□□□□□ -1.52
HMGB1P44-201ENST00000508597 COG1Q8WTW3 980 aa5.56□□□□□ -1.52
HMGB1P44-201ENST00000508597 ZCCHC14Q8WYQ9 949 aaKnown RBP5.56□□□□□ -1.52
HMGB1P44-201ENST00000508597 P2RY11Q96G91 374 aa5.56□□□□□ -1.52
HMGB1P44-201ENST00000508597 CCDC114Q96M63 670 aa5.56□□□□□ -1.52
HMGB1P44-201ENST00000508597 VAT1Q99536 393 aa5.56□□□□□ -1.52
HMGB1P44-201ENST00000508597 ELF4Q99607 663 aaPredicted RBP5.56□□□□□ -1.52
HMGB1P44-201ENST00000508597 MAGEB5Q9BZ81 275 aa5.56□□□□□ -1.52
HMGB1P44-201ENST00000508597 SLC39A8Q9C0K1 460 aa5.56□□□□□ -1.52
HMGB1P44-201ENST00000508597 ZCCHC4Q9H5U6 513 aa5.56□□□□□ -1.52
HMGB1P44-201ENST00000508597 LMAN1LQ9HAT1 526 aa5.56□□□□□ -1.52
HMGB1P44-201ENST00000508597 FBRSL1Q9HCM7 1045 aaKnown RBP5.56□□□□□ -1.52
HMGB1P44-201ENST00000508597 RIC8BQ9NVN3 520 aa5.56□□□□□ -1.52
HMGB1P44-201ENST00000508597 IPO11Q9UI26 975 aaKnown RBP5.56□□□□□ -1.52
HMGB1P44-201ENST00000508597 CROTQ9UKG9 612 aa5.56□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms