RNA–Protein interactions for RNA: ENST00000508474.5

UBE2D3-224, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

TSL 2

Gene UBE2D3, Length 4,819 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-224ENST00000508474 FAM156AQ8NDB6 213 aa7.28□□□□□ -1.24
UBE2D3-224ENST00000508474 TMEM161BQ8NDZ6 487 aa7.28□□□□□ -1.24
UBE2D3-224ENST00000508474 OR6J1Q8NGC5 347 aa7.28□□□□□ -1.24
UBE2D3-224ENST00000508474 FAM84AQ96KN4 292 aa7.28□□□□□ -1.24
UBE2D3-224ENST00000508474 ZNF512Q96ME7 567 aaPredicted RBP7.28□□□□□ -1.24
UBE2D3-224ENST00000508474 PPM1MQ96MI6 270 aa7.28□□□□□ -1.24
UBE2D3-224ENST00000508474 SLC30A2Q9BRI3 323 aa7.28□□□□□ -1.24
UBE2D3-224ENST00000508474 TMEM246Q9BRR3 403 aa7.28□□□□□ -1.24
UBE2D3-224ENST00000508474 FNDC11Q9BVV2 318 aa7.28□□□□□ -1.24
UBE2D3-224ENST00000508474 LRRC3Q9BY71 257 aa7.28□□□□□ -1.24
UBE2D3-224ENST00000508474 ACTR3BQ9P1U1 418 aa7.28□□□□□ -1.24
UBE2D3-224ENST00000508474 RABL2AQ9UBK7 228 aaPredicted RBP7.28□□□□□ -1.24
UBE2D3-224ENST00000508474 UPB1Q9UBR1 384 aa7.28□□□□□ -1.24
UBE2D3-224ENST00000508474 USP21Q9UK80 565 aa7.28□□□□□ -1.24
UBE2D3-224ENST00000508474 CNTN6Q9UQ52 1028 aa7.28□□□□□ -1.24
UBE2D3-224ENST00000508474 ZBTB14O43829 449 aa7.28□□□□□ -1.24
UBE2D3-224ENST00000508474 RHOCP08134 193 aa7.28□□□□□ -1.24
UBE2D3-224ENST00000508474 SLC6A2P23975 617 aa7.28□□□□□ -1.24
UBE2D3-224ENST00000508474 RHOAP61586 193 aa7.28□□□□□ -1.24
UBE2D3-224ENST00000508474 EFR3AQ14156 821 aa7.28□□□□□ -1.24
UBE2D3-224ENST00000508474 RFTN1Q14699 578 aaPredicted RBP7.28□□□□□ -1.24
UBE2D3-224ENST00000508474 AMHR2Q16671 573 aa7.28□□□□□ -1.24
UBE2D3-224ENST00000508474 CTC1Q2NKJ3 1217 aa7.28□□□□□ -1.24
UBE2D3-224ENST00000508474 SLC9B1Q4ZJI4 515 aa7.28□□□□□ -1.24
UBE2D3-224ENST00000508474 OLFML2AQ68BL7 652 aa7.28□□□□□ -1.24
UBE2D3-224ENST00000508474 EPGNQ6UW88 154 aa7.28□□□□□ -1.24
UBE2D3-224ENST00000508474 FAM180AQ6UWF9 173 aa7.28□□□□□ -1.24
UBE2D3-224ENST00000508474 ZNF767PQ75MW2 155 aa7.28□□□□□ -1.24
UBE2D3-224ENST00000508474 ZC3H7AQ8IWR0 971 aaKnown RBP7.28□□□□□ -1.24
UBE2D3-224ENST00000508474 CANT1Q8WVQ1 401 aa7.28□□□□□ -1.24
UBE2D3-224ENST00000508474 CREB3L1Q96BA8 519 aa7.28□□□□□ -1.24
UBE2D3-224ENST00000508474 SLC7A6OSQ96CW6 309 aaPredicted RBP7.28□□□□□ -1.24
UBE2D3-224ENST00000508474 ZNF607Q96SK3 696 aa7.28□□□□□ -1.24
UBE2D3-224ENST00000508474 CDK5RAP1Q96SZ6 601 aaKnown RBP7.28□□□□□ -1.24
UBE2D3-224ENST00000508474 SLC9A7Q96T83 725 aa7.28□□□□□ -1.24
UBE2D3-224ENST00000508474 ARL15Q9NXU5 204 aa7.28□□□□□ -1.24
UBE2D3-224ENST00000508474 NKIRAS2Q9NYR9 191 aa7.28□□□□□ -1.24
UBE2D3-224ENST00000508474 FAM50BQ9Y247 325 aa7.28□□□□□ -1.24
UBE2D3-224ENST00000508474 TMX2Q9Y320 296 aa7.28□□□□□ -1.24
UBE2D3-224ENST00000508474 LYVE1Q9Y5Y7 322 aa7.28□□□□□ -1.24
UBE2D3-224ENST00000508474 DISP2A7MBM2 1401 aa7.28□□□□□ -1.24
UBE2D3-224ENST00000508474 COQ9O75208 318 aa7.28□□□□□ -1.24
UBE2D3-224ENST00000508474 DLDP09622 509 aaKnown RBP7.28□□□□□ -1.24
UBE2D3-224ENST00000508474 FGRP09769 529 aa7.28□□□□□ -1.24
UBE2D3-224ENST00000508474 UROSP10746 265 aa7.28□□□□□ -1.24
UBE2D3-224ENST00000508474 PROZP22891 400 aa7.28□□□□□ -1.24
UBE2D3-224ENST00000508474 ABL2P42684 1182 aa7.28□□□□□ -1.24
UBE2D3-224ENST00000508474 GNPDA1P46926 289 aa7.28□□□□□ -1.24
UBE2D3-224ENST00000508474 DEFA5Q01523 94 aa7.28□□□□□ -1.24
UBE2D3-224ENST00000508474 CTBP1Q13363 440 aa7.28□□□□□ -1.24
UBE2D3-224ENST00000508474 TMEM44Q2T9K0 475 aa7.28□□□□□ -1.24
UBE2D3-224ENST00000508474 MGAT5BQ3V5L5 792 aa7.28□□□□□ -1.24
UBE2D3-224ENST00000508474 ZC3H12AQ5D1E8 599 aaKnown RBP7.28□□□□□ -1.24
UBE2D3-224ENST00000508474 LYPLAL1Q5VWZ2 237 aa7.28□□□□□ -1.24
UBE2D3-224ENST00000508474 OR52E8Q6IFG1 317 aa7.28□□□□□ -1.24
UBE2D3-224ENST00000508474 PAOXQ6QHF9 649 aa7.28□□□□□ -1.24
UBE2D3-224ENST00000508474 RALGPS2Q86X27 583 aaPredicted RBP7.28□□□□□ -1.24
UBE2D3-224ENST00000508474 GLB1L3Q8NCI6 653 aaPredicted RBP7.28□□□□□ -1.24
UBE2D3-224ENST00000508474 P2RY11Q96G91 374 aa7.28□□□□□ -1.24
UBE2D3-224ENST00000508474 PRICKLE1Q96MT3 831 aaPredicted RBP7.28□□□□□ -1.24
UBE2D3-224ENST00000508474 PDCD2LQ9BRP1 358 aa7.28□□□□□ -1.24
UBE2D3-224ENST00000508474 ZSCAN5AQ9BUG6 496 aa7.28□□□□□ -1.24
UBE2D3-224ENST00000508474 POLR3BQ9NW08 1133 aaPredicted RBP7.28□□□□□ -1.24
UBE2D3-224ENST00000508474 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP7.28□□□□□ -1.243e-8■■■□□ 18.1
UBE2D3-224ENST00000508474 NCKAP1Q9Y2A7 1128 aa7.28□□□□□ -1.24
UBE2D3-224ENST00000508474 CXCR6O00574 342 aa7.27□□□□□ -1.24
UBE2D3-224ENST00000508474 OR7A10O76100 309 aa7.27□□□□□ -1.24
UBE2D3-224ENST00000508474 INMTO95050 263 aa7.27□□□□□ -1.24
UBE2D3-224ENST00000508474 SNX4O95219 450 aa7.27□□□□□ -1.24
UBE2D3-224ENST00000508474 CRYZL1O95825 349 aa7.27□□□□□ -1.24
UBE2D3-224ENST00000508474 RLN1P04808 185 aa7.27□□□□□ -1.24
UBE2D3-224ENST00000508474 ZNF182P17025 639 aaPredicted RBP7.27□□□□□ -1.24
UBE2D3-224ENST00000508474 PRKACBP22694 351 aa7.27□□□□□ -1.24
UBE2D3-224ENST00000508474 STOMP27105 288 aa7.27□□□□□ -1.24
UBE2D3-224ENST00000508474 GRIA2P42262 883 aa7.27□□□□□ -1.24
UBE2D3-224ENST00000508474 HMGCS2P54868 508 aa7.27□□□□□ -1.24
UBE2D3-224ENST00000508474 TGFB2P61812 414 aa7.27□□□□□ -1.24
UBE2D3-224ENST00000508474 LCP2Q13094 533 aa7.27□□□□□ -1.24
UBE2D3-224ENST00000508474 SNAPC1Q16533 368 aa7.27□□□□□ -1.24
UBE2D3-224ENST00000508474 PPM1JQ5JR12 505 aa7.27□□□□□ -1.24
UBE2D3-224ENST00000508474 TXNRD3Q86VQ6 643 aa7.27□□□□□ -1.24
UBE2D3-224ENST00000508474 NAT8LQ8N9F0 302 aa7.27□□□□□ -1.24
UBE2D3-224ENST00000508474 ZNF285Q96NJ3 590 aa7.27□□□□□ -1.24
UBE2D3-224ENST00000508474 CCDC106Q9BWC9 280 aa7.27□□□□□ -1.24
UBE2D3-224ENST00000508474 PCDHAC1Q9H158 963 aa7.27□□□□□ -1.24
UBE2D3-224ENST00000508474 ZFP14Q9HCL3 533 aa7.27□□□□□ -1.24
UBE2D3-224ENST00000508474 HSPB11Q9Y547 144 aa7.27□□□□□ -1.24
UBE2D3-224ENST00000508474 KCNE2Q9Y6J6 123 aa7.27□□□□□ -1.24
UBE2D3-224ENST00000508474 ARHGAP23Q9P227 1491 aa7.27□□□□□ -1.25
UBE2D3-224ENST00000508474 TISP43B9A030 160 aa7.27□□□□□ -1.25
UBE2D3-224ENST00000508474 ARPC2O15144 300 aa7.27□□□□□ -1.25
UBE2D3-224ENST00000508474 MID1O15344 667 aa7.27□□□□□ -1.25
UBE2D3-224ENST00000508474 RFPL2O75678 378 aa7.27□□□□□ -1.25
UBE2D3-224ENST00000508474 SLITRK5O94991 958 aa7.27□□□□□ -1.25
UBE2D3-224ENST00000508474 OXSR1O95747 527 aaPredicted RBP7.27□□□□□ -1.25
UBE2D3-224ENST00000508474 SPATA31C1P0DKV0 1188 aa7.27□□□□□ -1.25
UBE2D3-224ENST00000508474 TSPAN8P19075 237 aa7.27□□□□□ -1.25
UBE2D3-224ENST00000508474 KLRC2P26717 231 aa7.27□□□□□ -1.25
UBE2D3-224ENST00000508474 CYP4F8P98187 520 aa7.27□□□□□ -1.25
UBE2D3-224ENST00000508474 IRF8Q02556 426 aa7.27□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms