RNA–Protein interactions for RNA: ENST00000507247.5

RNF4-208, Transcript of ring finger protein 4, humanhuman

TSL 1 (best)

Gene RNF4, Length 616 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-208ENST00000507247 ACSS3Q9H6R3 686 aa14.1□□□□□ -0.15
RNF4-208ENST00000507247 ASB8Q9H765 288 aa14.1□□□□□ -0.15
RNF4-208ENST00000507247 PPANQ9NQ55 473 aaKnown RBP14.1□□□□□ -0.15
RNF4-208ENST00000507247 CATSPERZQ9NTU4 200 aa14.1□□□□□ -0.15
RNF4-208ENST00000507247 ARGLU1Q9NWB6 273 aaPredicted RBP14.1□□□□□ -0.15
RNF4-208ENST00000507247 KCTD5Q9NXV2 234 aa14.1□□□□□ -0.15
RNF4-208ENST00000507247 CA5BQ9Y2D0 317 aa14.1□□□□□ -0.15
RNF4-208ENST00000507247 ZBTB32Q9Y2Y4 487 aaPredicted RBP14.1□□□□□ -0.15
RNF4-208ENST00000507247 SLC30A1Q9Y6M5 507 aa14.1□□□□□ -0.15
RNF4-208ENST00000507247 FANCMQ8IYD8 2048 aa14.1□□□□□ -0.15
RNF4-208ENST00000507247 MUC6Q6W4X9 2439 aa14.1□□□□□ -0.15
RNF4-208ENST00000507247 AGAP14A8MT82 685 aa14.09□□□□□ -0.15
RNF4-208ENST00000507247 METTL12A8MUP2 240 aa14.09□□□□□ -0.15
RNF4-208ENST00000507247 CD3EAPO15446 510 aaKnown RBP14.09□□□□□ -0.15
RNF4-208ENST00000507247 SHBGP04278 402 aa14.09□□□□□ -0.15
RNF4-208ENST00000507247 SP9P0CG40 484 aa14.09□□□□□ -0.15
RNF4-208ENST00000507247 ITGALP20701 1170 aa14.09□□□□□ -0.15
RNF4-208ENST00000507247 SLC1A2P43004 574 aa14.09□□□□□ -0.15
RNF4-208ENST00000507247 THOC5Q13769 683 aaKnown RBP14.09□□□□□ -0.15
RNF4-208ENST00000507247 SETMARQ53H47 684 aaPredicted RBP14.09□□□□□ -0.15
RNF4-208ENST00000507247 FASTKD1Q53R41 847 aaKnown RBP14.09□□□□□ -0.15
RNF4-208ENST00000507247 TEDDM1Q5T9Z0 273 aa14.09□□□□□ -0.15
RNF4-208ENST00000507247 ZNF470Q6ECI4 717 aa14.09□□□□□ -0.15
RNF4-208ENST00000507247 PNCKQ6P2M8 343 aa14.09□□□□□ -0.15
RNF4-208ENST00000507247 ZNF449Q6P9G9 518 aa14.09□□□□□ -0.15
RNF4-208ENST00000507247 ALYREFQ86V81 257 aaKnown RBP14.09□□□□□ -0.15
RNF4-208ENST00000507247 CNTN4Q8IWV2 1026 aa14.09□□□□□ -0.15
RNF4-208ENST00000507247 CADM4Q8NFZ8 388 aa14.09□□□□□ -0.15
RNF4-208ENST00000507247 GPR150Q8NGU9 434 aa14.09□□□□□ -0.15
RNF4-208ENST00000507247 GAB3Q8WWW8 586 aa14.09□□□□□ -0.15
RNF4-208ENST00000507247 CCDC97Q96F63 343 aaPredicted RBP14.09□□□□□ -0.15
RNF4-208ENST00000507247 LENG8Q96PV6 779 aaPredicted RBP14.09□□□□□ -0.15
RNF4-208ENST00000507247 FAM167BQ9BTA0 163 aa14.09□□□□□ -0.15
RNF4-208ENST00000507247 ZSCAN5AQ9BUG6 496 aa14.09□□□□□ -0.15
RNF4-208ENST00000507247 PCED1AQ9H1Q7 454 aa14.09□□□□□ -0.15
RNF4-208ENST00000507247 ARFGAP3Q9NP61 516 aa14.09□□□□□ -0.15
RNF4-208ENST00000507247 PSAT1Q9Y617 370 aa14.09□□□□□ -0.15
RNF4-208ENST00000507247 SLCO1B1Q9Y6L6 691 aa14.09□□□□□ -0.15
RNF4-208ENST00000507247 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa14.08□□□□□ -0.16
RNF4-208ENST00000507247 MAP3K13O43283 966 aa14.08□□□□□ -0.16
RNF4-208ENST00000507247 HRO43593 1189 aa14.08□□□□□ -0.16
RNF4-208ENST00000507247 OGNP20774 298 aaKnown RBP14.08□□□□□ -0.16
RNF4-208ENST00000507247 HNRNPA2B1P22626 353 aaKnown RBP14.08□□□□□ -0.16
RNF4-208ENST00000507247 GPR1P46091 355 aa14.08□□□□□ -0.16
RNF4-208ENST00000507247 CLDN2P57739 230 aa14.08□□□□□ -0.16
RNF4-208ENST00000507247 MPP1Q00013 466 aa14.08□□□□□ -0.16
RNF4-208ENST00000507247 CTBP1Q13363 440 aa14.08□□□□□ -0.16
RNF4-208ENST00000507247 ITGA9Q13797 1035 aa14.08□□□□□ -0.16
RNF4-208ENST00000507247 DBN1Q16643 649 aa14.08□□□□□ -0.16
RNF4-208ENST00000507247 TYSND1Q2T9J0 566 aa14.08□□□□□ -0.16
RNF4-208ENST00000507247 ZNF528Q3MIS6 628 aa14.08□□□□□ -0.16
RNF4-208ENST00000507247 MARK2Q7KZI7 788 aaKnown RBP14.08□□□□□ -0.16
RNF4-208ENST00000507247 TAS2R42Q7RTR8 314 aa14.08□□□□□ -0.16
RNF4-208ENST00000507247 CILP2Q8IUL8 1156 aa14.08□□□□□ -0.16
RNF4-208ENST00000507247 TMEFF1Q8IYR6 380 aa14.08□□□□□ -0.16
RNF4-208ENST00000507247 OTUD6BQ8N6M0 293 aa14.08□□□□□ -0.16
RNF4-208ENST00000507247 C2CD4AQ8NCU7 369 aaPredicted RBP14.08□□□□□ -0.16
RNF4-208ENST00000507247 DENND6BQ8NEG7 585 aa14.08□□□□□ -0.16
RNF4-208ENST00000507247 OR2W6PQ8NHA6 318 aa14.08□□□□□ -0.16
RNF4-208ENST00000507247 ANKRD7Q92527 254 aa14.08□□□□□ -0.16
RNF4-208ENST00000507247 SNX19Q92543 992 aa14.08□□□□□ -0.16
RNF4-208ENST00000507247 HSPA12BQ96MM6 686 aa14.08□□□□□ -0.16
RNF4-208ENST00000507247 C1QTNF7Q9BXJ2 289 aa14.08□□□□□ -0.16
RNF4-208ENST00000507247 FAM126AQ9BYI3 521 aaPredicted RBP14.08□□□□□ -0.16
RNF4-208ENST00000507247 SMOXQ9NWM0 555 aa14.08□□□□□ -0.16
RNF4-208ENST00000507247 ZFATQ9P243 1243 aa14.08□□□□□ -0.16
RNF4-208ENST00000507247 CRLS1Q9UJA2 301 aa14.08□□□□□ -0.16
RNF4-208ENST00000507247 FBXO5Q9UKT4 447 aa14.08□□□□□ -0.16
RNF4-208ENST00000507247 CNOT6Q9ULM6 557 aaKnown RBP14.08□□□□□ -0.16
RNF4-208ENST00000507247 TP53BP1Q12888 1972 aaPredicted RBP14.08□□□□□ -0.16
RNF4-208ENST00000507247 SPAG17Q6Q759 2223 aa14.07□□□□□ -0.16
RNF4-208ENST00000507247 A0A1W2PPC4 97 aa14.07□□□□□ -0.16
RNF4-208ENST00000507247 H0Y8X5 98 aa14.07□□□□□ -0.16
RNF4-208ENST00000507247 INPP4BO15327 924 aa14.07□□□□□ -0.16
RNF4-208ENST00000507247 GALR2O43603 387 aaPredicted RBP14.07□□□□□ -0.16
RNF4-208ENST00000507247 NUDT17P0C025 328 aa14.07□□□□□ -0.16
RNF4-208ENST00000507247 ACRV1P26436 265 aa14.07□□□□□ -0.16
RNF4-208ENST00000507247 GABRB3P28472 473 aa14.07□□□□□ -0.16
RNF4-208ENST00000507247 GCAP28676 217 aa14.07□□□□□ -0.16
RNF4-208ENST00000507247 TCF15Q12870 199 aa14.07□□□□□ -0.16
RNF4-208ENST00000507247 INPP5AQ14642 412 aa14.07□□□□□ -0.16
RNF4-208ENST00000507247 GPR33Q49SQ1 333 aa14.07□□□□□ -0.16
RNF4-208ENST00000507247 KHDC1Q4VXA5 237 aaKnown RBP14.07□□□□□ -0.16
RNF4-208ENST00000507247 ZNF789Q5FWF6 425 aa14.07□□□□□ -0.16
RNF4-208ENST00000507247 GPRC6AQ5T6X5 926 aa14.07□□□□□ -0.16
RNF4-208ENST00000507247 GCNT7Q6ZNI0 430 aa14.07□□□□□ -0.16
RNF4-208ENST00000507247 TRIM74Q86UV6 250 aa14.07□□□□□ -0.16
RNF4-208ENST00000507247 SERPINA9Q86WD7 417 aa14.07□□□□□ -0.16
RNF4-208ENST00000507247 CTAGE3PQ8IX95 158 aa14.07□□□□□ -0.16
RNF4-208ENST00000507247 LMNTD2Q8IXW0 634 aa14.07□□□□□ -0.16
RNF4-208ENST00000507247 NXPE1Q8N323 547 aa14.07□□□□□ -0.16
RNF4-208ENST00000507247 PPM1NQ8N819 430 aa14.07□□□□□ -0.16
RNF4-208ENST00000507247 TMEM145Q8NBT3 493 aa14.07□□□□□ -0.16
RNF4-208ENST00000507247 CALML6Q8TD86 181 aa14.07□□□□□ -0.16
RNF4-208ENST00000507247 BTN2A2Q8WVV5 523 aa14.07□□□□□ -0.16
RNF4-208ENST00000507247 GLYATL1Q969I3 302 aa14.07□□□□□ -0.16
RNF4-208ENST00000507247 TBRG4Q969Z0 631 aaKnown RBP eCLIP14.07□□□□□ -0.162e-6■■■■■ 54.9
RNF4-208ENST00000507247 FUBP1Q96AE4 644 aaKnown RBP14.07□□□□□ -0.16
RNF4-208ENST00000507247 MRRFQ96E11 262 aaKnown RBP14.07□□□□□ -0.16
RNF4-208ENST00000507247 VPS35Q96QK1 796 aa14.07□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms