RNA–Protein interactions for RNA: ENST00000507162.1

VCAN-207, Transcript of versican, humanhuman

TSL 3

Gene VCAN, Length 766 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCAN-207ENST00000507162 PIGVQ9NUD9 493 aa7.13□□□□□ -1.27
VCAN-207ENST00000507162 EXOC1Q9NV70 894 aa7.13□□□□□ -1.27
VCAN-207ENST00000507162 PPP4R2Q9NY27 417 aa7.13□□□□□ -1.27
VCAN-207ENST00000507162 MFHAS1Q9Y4C4 1052 aa7.13□□□□□ -1.27
VCAN-207ENST00000507162 TLN2Q9Y4G6 2542 aa7.13□□□□□ -1.27
VCAN-207ENST00000507162 SPTBP11277 2137 aa7.13□□□□□ -1.27
VCAN-207ENST00000507162 MXRA5Q9NR99 2828 aa7.13□□□□□ -1.27
VCAN-207ENST00000507162 IGLV3-10A0A075B6K4 115 aa7.12□□□□□ -1.27
VCAN-207ENST00000507162 A0A0U1RQS6 177 aa7.12□□□□□ -1.27
VCAN-207ENST00000507162 CFAP69A5D8W1 941 aa7.12□□□□□ -1.27
VCAN-207ENST00000507162 TOX3O15405 576 aaPredicted RBP7.12□□□□□ -1.27
VCAN-207ENST00000507162 HSF2BPO75031 334 aa7.12□□□□□ -1.27
VCAN-207ENST00000507162 UBXN7O94888 489 aa7.12□□□□□ -1.27
VCAN-207ENST00000507162 CLDN14O95500 239 aa7.12□□□□□ -1.27
VCAN-207ENST00000507162 GM2AP17900 193 aa7.12□□□□□ -1.27
VCAN-207ENST00000507162 NELFEP18615 380 aaKnown RBP7.12□□□□□ -1.27
VCAN-207ENST00000507162 TFE3P19532 575 aaPredicted RBP7.12□□□□□ -1.27
VCAN-207ENST00000507162 PCSK6P29122 969 aa7.12□□□□□ -1.27
VCAN-207ENST00000507162 ADSLP30566 484 aaPredicted RBP7.12□□□□□ -1.27
VCAN-207ENST00000507162 TSFMP43897 325 aaKnown RBP7.12□□□□□ -1.27
VCAN-207ENST00000507162 CXCR3P49682 368 aa7.12□□□□□ -1.27
VCAN-207ENST00000507162 ARL4DP49703 201 aa7.12□□□□□ -1.27
VCAN-207ENST00000507162 OTUD4Q01804 1114 aaKnown RBP7.12□□□□□ -1.27
VCAN-207ENST00000507162 DEUP1Q05D60 604 aa7.12□□□□□ -1.27
VCAN-207ENST00000507162 RALGDSQ12967 914 aa7.12□□□□□ -1.27
VCAN-207ENST00000507162 GPS2Q13227 327 aa7.12□□□□□ -1.27
VCAN-207ENST00000507162 ZNF169Q14929 603 aaPredicted RBP7.12□□□□□ -1.27
VCAN-207ENST00000507162 CDSNQ15517 529 aa7.12□□□□□ -1.27
VCAN-207ENST00000507162 CEBPEQ15744 281 aa7.12□□□□□ -1.27
VCAN-207ENST00000507162 CBWD6Q4V339 395 aa7.12□□□□□ -1.27
VCAN-207ENST00000507162 PYCR3Q53H96 274 aa7.12□□□□□ -1.27
VCAN-207ENST00000507162 DCAF17Q5H9S7 520 aaPredicted RBP7.12□□□□□ -1.27
VCAN-207ENST00000507162 CBWD3Q5JTY5 395 aa7.12□□□□□ -1.27
VCAN-207ENST00000507162 BRMS1LQ5PSV4 323 aa7.12□□□□□ -1.27
VCAN-207ENST00000507162 CBWD5Q5RIA9 395 aa7.12□□□□□ -1.27
VCAN-207ENST00000507162 RAET1GQ6H3X3 334 aa7.12□□□□□ -1.27
VCAN-207ENST00000507162 IRGCQ6NXR0 463 aa7.12□□□□□ -1.27
VCAN-207ENST00000507162 CYB5D1Q6P9G0 228 aa7.12□□□□□ -1.27
VCAN-207ENST00000507162 BRAT1Q6PJG6 821 aa7.12□□□□□ -1.27
VCAN-207ENST00000507162 CHST15Q7LFX5 561 aaPredicted RBP7.12□□□□□ -1.27
VCAN-207ENST00000507162 ZSWIM9Q86XI8 627 aa7.12□□□□□ -1.27
VCAN-207ENST00000507162 RAB43Q86YS6 212 aa7.12□□□□□ -1.27
VCAN-207ENST00000507162 GALNT13Q8IUC8 556 aa7.12□□□□□ -1.27
VCAN-207ENST00000507162 TMEM126BQ8IUX1 230 aa7.12□□□□□ -1.27
VCAN-207ENST00000507162 DNAJB8Q8NHS0 232 aa7.12□□□□□ -1.27
VCAN-207ENST00000507162 HCAR2Q8TDS4 363 aa7.12□□□□□ -1.27
VCAN-207ENST00000507162 STK32AQ8WU08 396 aa7.12□□□□□ -1.27
VCAN-207ENST00000507162 KAT5Q92993 513 aa7.12□□□□□ -1.27
VCAN-207ENST00000507162 NUS1Q96E22 293 aa7.12□□□□□ -1.27
VCAN-207ENST00000507162 FER1L6-AS2Q96M78 137 aa7.12□□□□□ -1.27
VCAN-207ENST00000507162 FCRL4Q96PJ5 515 aa7.12□□□□□ -1.27
VCAN-207ENST00000507162 GBP5Q96PP8 586 aa7.12□□□□□ -1.27
VCAN-207ENST00000507162 SLX1AQ9BQ83 275 aa7.12□□□□□ -1.27
VCAN-207ENST00000507162 NLNQ9BYT8 704 aa7.12□□□□□ -1.27
VCAN-207ENST00000507162 CXXC4Q9H2H0 198 aa7.12□□□□□ -1.27
VCAN-207ENST00000507162 OGFRQ9NZT2 677 aa7.12□□□□□ -1.27
VCAN-207ENST00000507162 CPNE7Q9UBL6 633 aa7.12□□□□□ -1.27
VCAN-207ENST00000507162 ZNF212Q9UDV6 495 aa7.12□□□□□ -1.27
VCAN-207ENST00000507162 TBC1D29Q9UFV1 150 aa7.12□□□□□ -1.27
VCAN-207ENST00000507162 SMC3Q9UQE7 1217 aa7.12□□□□□ -1.27
VCAN-207ENST00000507162 MAPK8IP1Q9UQF2 711 aa7.12□□□□□ -1.27
VCAN-207ENST00000507162 BTRCQ9Y297 605 aa7.12□□□□□ -1.27
VCAN-207ENST00000507162 SLC17A4Q9Y2C5 497 aa7.12□□□□□ -1.27
VCAN-207ENST00000507162 PRKAB1Q9Y478 270 aa7.12□□□□□ -1.27
VCAN-207ENST00000507162 PCDHGC4Q9Y5F7 938 aa7.12□□□□□ -1.27
VCAN-207ENST00000507162 SLC30A1Q9Y6M5 507 aa7.12□□□□□ -1.27
VCAN-207ENST00000507162 CCDC78A2IDD5 438 aa7.11□□□□□ -1.27
VCAN-207ENST00000507162 PEX12O00623 359 aa7.11□□□□□ -1.27
VCAN-207ENST00000507162 POLR2DO15514 142 aaKnown RBP7.11□□□□□ -1.27
VCAN-207ENST00000507162 LDB2O43679 373 aa7.11□□□□□ -1.27
VCAN-207ENST00000507162 KDELR3O43731 214 aa7.11□□□□□ -1.27
VCAN-207ENST00000507162 CPNE3O75131 537 aaKnown RBP7.11□□□□□ -1.27
VCAN-207ENST00000507162 SCRG1O75711 98 aa7.11□□□□□ -1.27
VCAN-207ENST00000507162 LETM1O95202 739 aaPredicted RBP7.11□□□□□ -1.27
VCAN-207ENST00000507162 ASMTLO95671 621 aa7.11□□□□□ -1.27
VCAN-207ENST00000507162 GLI1P08151 1106 aa7.11□□□□□ -1.27
VCAN-207ENST00000507162 RAB40ALP0C0E4 278 aa7.11□□□□□ -1.27
VCAN-207ENST00000507162 EBLN1P0CF75 366 aa7.11□□□□□ -1.27
VCAN-207ENST00000507162 ADRA1BP35368 520 aa7.11□□□□□ -1.27
VCAN-207ENST00000507162 ARCN1P48444 511 aaKnown RBP7.11□□□□□ -1.27
VCAN-207ENST00000507162 SULT1E1P49888 294 aa7.11□□□□□ -1.27
VCAN-207ENST00000507162 MEOX1P50221 254 aa7.11□□□□□ -1.27
VCAN-207ENST00000507162 CASP6P55212 293 aa7.11□□□□□ -1.27
VCAN-207ENST00000507162 ADORA2A-AS1P86434 159 aa7.11□□□□□ -1.27
VCAN-207ENST00000507162 SLC39A14Q15043 492 aa7.11□□□□□ -1.27
VCAN-207ENST00000507162 PRKD1Q15139 912 aaPredicted RBP7.11□□□□□ -1.27
VCAN-207ENST00000507162 PRAMEF17Q5VTA0 474 aa7.11□□□□□ -1.27
VCAN-207ENST00000507162 FCRL6Q6DN72 434 aa7.11□□□□□ -1.27
VCAN-207ENST00000507162 PLEKHA7Q6IQ23 1121 aa7.11□□□□□ -1.27
VCAN-207ENST00000507162 TRIM74Q86UV6 250 aa7.11□□□□□ -1.27
VCAN-207ENST00000507162 PPM1KQ8N3J5 372 aa7.11□□□□□ -1.27
VCAN-207ENST00000507162 SLC38A9Q8NBW4 561 aa7.11□□□□□ -1.27
VCAN-207ENST00000507162 KLHL6Q8WZ60 621 aa7.11□□□□□ -1.27
VCAN-207ENST00000507162 ZDHHC12Q96GR4 267 aa7.11□□□□□ -1.27
VCAN-207ENST00000507162 INTS4Q96HW7 963 aaKnown RBP7.11□□□□□ -1.27
VCAN-207ENST00000507162 ZNF641Q96N77 438 aaPredicted RBP7.11□□□□□ -1.27
VCAN-207ENST00000507162 TMEM121Q9BTD3 319 aa7.11□□□□□ -1.27
VCAN-207ENST00000507162 MAGEH1Q9H213 219 aa7.11□□□□□ -1.27
VCAN-207ENST00000507162 TRAF3IP3Q9Y228 551 aa7.11□□□□□ -1.27
VCAN-207ENST00000507162 KCNK6Q9Y257 313 aa7.11□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms