RNA–Protein interactions for RNA: ENST00000505553.5

TRAPPC13-208, Transcript of trafficking protein particle complex 13, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene TRAPPC13, Length 1,410 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC13-208ENST00000505553 EXOC4Q96A65 974 aa3.91□□□□□ -1.78
TRAPPC13-208ENST00000505553 ZNF419Q96HQ0 510 aaPredicted RBP3.91□□□□□ -1.78
TRAPPC13-208ENST00000505553 RITA1Q96K30 269 aa3.91□□□□□ -1.78
TRAPPC13-208ENST00000505553 ACOX2Q99424 681 aa3.91□□□□□ -1.78
TRAPPC13-208ENST00000505553 TMEM79Q9BSE2 394 aa3.91□□□□□ -1.78
TRAPPC13-208ENST00000505553 PIMREGQ9BSJ6 248 aa3.91□□□□□ -1.78
TRAPPC13-208ENST00000505553 MLPHQ9BV36 600 aaPredicted RBP3.91□□□□□ -1.78
TRAPPC13-208ENST00000505553 FAM129AQ9BZQ8 928 aa3.91□□□□□ -1.78
TRAPPC13-208ENST00000505553 SLCO5A1Q9H2Y9 848 aa3.91□□□□□ -1.78
TRAPPC13-208ENST00000505553 GOLPH3LQ9H4A5 285 aa3.91□□□□□ -1.78
TRAPPC13-208ENST00000505553 MAGIXQ9H6Y5 334 aa3.91□□□□□ -1.78
TRAPPC13-208ENST00000505553 DNAJC18Q9H819 358 aa3.91□□□□□ -1.78
TRAPPC13-208ENST00000505553 NOL11Q9H8H0 719 aaKnown RBP3.91□□□□□ -1.78
TRAPPC13-208ENST00000505553 ANKZF1Q9H8Y5 726 aa3.91□□□□□ -1.78
TRAPPC13-208ENST00000505553 EPB41L5Q9HCM4 733 aa3.91□□□□□ -1.78
TRAPPC13-208ENST00000505553 MLXIPLQ9NP71 852 aa3.91□□□□□ -1.78
TRAPPC13-208ENST00000505553 PNRC2Q9NPJ4 139 aaKnown RBP3.91□□□□□ -1.78
TRAPPC13-208ENST00000505553 PLEKHB1Q9UF11 243 aaPredicted RBP3.91□□□□□ -1.78
TRAPPC13-208ENST00000505553 MOSPD1Q9UJG1 213 aa3.91□□□□□ -1.78
TRAPPC13-208ENST00000505553 LEF1Q9UJU2 399 aaPredicted RBP3.91□□□□□ -1.78
TRAPPC13-208ENST00000505553 NFE2L3Q9Y4A8 694 aa3.91□□□□□ -1.78
TRAPPC13-208ENST00000505553 LIPGQ9Y5X9 500 aa3.91□□□□□ -1.78
TRAPPC13-208ENST00000505553 COX11Q9Y6N1 276 aa3.91□□□□□ -1.78
TRAPPC13-208ENST00000505553 ARHGEF40Q8TER5 1519 aa3.9□□□□□ -1.78
TRAPPC13-208ENST00000505553 CPED1A4D0V7 1026 aa3.9□□□□□ -1.78
TRAPPC13-208ENST00000505553 HTR3EA5X5Y0 456 aa3.9□□□□□ -1.78
TRAPPC13-208ENST00000505553 ZNF263O14978 683 aa3.9□□□□□ -1.78
TRAPPC13-208ENST00000505553 MOSPD3O75425 235 aa3.9□□□□□ -1.78
TRAPPC13-208ENST00000505553 SLCO2B1O94956 709 aa3.9□□□□□ -1.78
TRAPPC13-208ENST00000505553 NDUFB4O95168 129 aa3.9□□□□□ -1.78
TRAPPC13-208ENST00000505553 LINGO3P0C6S8 592 aa3.9□□□□□ -1.78
TRAPPC13-208ENST00000505553 WT1P19544 449 aaPredicted RBP3.9□□□□□ -1.78
TRAPPC13-208ENST00000505553 ACHEP22303 614 aa3.9□□□□□ -1.78
TRAPPC13-208ENST00000505553 UBA1P22314 1058 aaKnown RBP3.9□□□□□ -1.78
TRAPPC13-208ENST00000505553 HSPA4P34932 840 aa3.9□□□□□ -1.78
TRAPPC13-208ENST00000505553 CXCR3P49682 368 aa3.9□□□□□ -1.78
TRAPPC13-208ENST00000505553 SREBF2Q12772 1141 aa3.9□□□□□ -1.78
TRAPPC13-208ENST00000505553 FOXI1Q12951 378 aa3.9□□□□□ -1.78
TRAPPC13-208ENST00000505553 COASYQ13057 564 aa3.9□□□□□ -1.78
TRAPPC13-208ENST00000505553 PPIGQ13427 754 aaKnown RBP eCLIP3.9□□□□□ -1.78
TRAPPC13-208ENST00000505553 CAPSQ13938 189 aa3.9□□□□□ -1.78
TRAPPC13-208ENST00000505553 LPIN1Q14693 890 aa3.9□□□□□ -1.78
TRAPPC13-208ENST00000505553 PTPRCAPQ14761 206 aa3.9□□□□□ -1.78
TRAPPC13-208ENST00000505553 MEP1BQ16820 701 aa3.9□□□□□ -1.78
TRAPPC13-208ENST00000505553 DCAF6Q58WW2 860 aa3.9□□□□□ -1.78
TRAPPC13-208ENST00000505553 NHSL2Q5HYW2 709 aa3.9□□□□□ -1.78
TRAPPC13-208ENST00000505553 EARS2Q5JPH6 523 aaKnown RBP3.9□□□□□ -1.78
TRAPPC13-208ENST00000505553 GLRA4Q5JXX5 417 aa3.9□□□□□ -1.78
TRAPPC13-208ENST00000505553 SFMBT2Q5VUG0 894 aa3.9□□□□□ -1.78
TRAPPC13-208ENST00000505553 METTL2BQ6P1Q9 378 aaKnown RBP3.9□□□□□ -1.78
TRAPPC13-208ENST00000505553 ZNF449Q6P9G9 518 aa3.9□□□□□ -1.78
TRAPPC13-208ENST00000505553 TRILQ7L0X0 811 aa3.9□□□□□ -1.78
TRAPPC13-208ENST00000505553 OTOAQ7RTW8 1153 aa3.9□□□□□ -1.78
TRAPPC13-208ENST00000505553 CACNA2D4Q7Z3S7 1137 aa3.9□□□□□ -1.78
TRAPPC13-208ENST00000505553 SPATA19Q7Z5L4 167 aa3.9□□□□□ -1.78
TRAPPC13-208ENST00000505553 CENPVQ7Z7K6 275 aaPredicted RBP3.9□□□□□ -1.78
TRAPPC13-208ENST00000505553 RBM15BQ8NDT2 890 aaKnown RBP3.9□□□□□ -1.78
TRAPPC13-208ENST00000505553 OSR1Q8TAX0 266 aaPredicted RBP3.9□□□□□ -1.78
TRAPPC13-208ENST00000505553 SPACA9Q96E40 222 aaPredicted RBP3.9□□□□□ -1.78
TRAPPC13-208ENST00000505553 METTL2AQ96IZ6 378 aaKnown RBP3.9□□□□□ -1.78
TRAPPC13-208ENST00000505553 PPP1R13BQ96KQ4 1090 aa3.9□□□□□ -1.78
TRAPPC13-208ENST00000505553 LINC00615Q96LM1 132 aaPredicted RBP3.9□□□□□ -1.78
TRAPPC13-208ENST00000505553 TIMP4Q99727 224 aa3.9□□□□□ -1.78
TRAPPC13-208ENST00000505553 ACAT2Q9BWD1 397 aa3.9□□□□□ -1.78
TRAPPC13-208ENST00000505553 CHMP1AQ9HD42 196 aaPredicted RBP3.9□□□□□ -1.78
TRAPPC13-208ENST00000505553 GPR108Q9NPR9 543 aa3.9□□□□□ -1.78
TRAPPC13-208ENST00000505553 SIRT3Q9NTG7 399 aaPredicted RBP3.9□□□□□ -1.78
TRAPPC13-208ENST00000505553 LARSQ9P2J5 1176 aaKnown RBP3.9□□□□□ -1.78
TRAPPC13-208ENST00000505553 SLC17A6Q9P2U8 582 aa3.9□□□□□ -1.78
TRAPPC13-208ENST00000505553 CACNG4Q9UBN1 327 aa3.9□□□□□ -1.78
TRAPPC13-208ENST00000505553 TSPYL4Q9UJ04 414 aa3.9□□□□□ -1.78
TRAPPC13-208ENST00000505553 UTS2RQ9UKP6 389 aa3.9□□□□□ -1.78
TRAPPC13-208ENST00000505553 ODF2LQ9ULJ1 636 aa3.9□□□□□ -1.78
TRAPPC13-208ENST00000505553 CLIC4Q9Y696 253 aa3.9□□□□□ -1.78
TRAPPC13-208ENST00000505553 ABCC9O60706 1549 aa3.9□□□□□ -1.79
TRAPPC13-208ENST00000505553 A0A087WV48 116 aa3.89□□□□□ -1.79
TRAPPC13-208ENST00000505553 LRRD1A4D1F6 860 aa3.89□□□□□ -1.79
TRAPPC13-208ENST00000505553 A4D1N5 150 aa3.89□□□□□ -1.79
TRAPPC13-208ENST00000505553 SMIM22K7EJ46 135 aa3.89□□□□□ -1.79
TRAPPC13-208ENST00000505553 MAP2K7O14733 419 aa3.89□□□□□ -1.79
TRAPPC13-208ENST00000505553 IFIT3O14879 490 aaKnown RBP3.89□□□□□ -1.79
TRAPPC13-208ENST00000505553 RGS11O94810 467 aa3.89□□□□□ -1.79
TRAPPC13-208ENST00000505553 ZWINTO95229 277 aa3.89□□□□□ -1.79
TRAPPC13-208ENST00000505553 WNT1P04628 370 aa3.89□□□□□ -1.79
TRAPPC13-208ENST00000505553 SUPT20HL2P0C7V6 817 aa3.89□□□□□ -1.79
TRAPPC13-208ENST00000505553 CYP2A6P11509 494 aaPredicted RBP3.89□□□□□ -1.79
TRAPPC13-208ENST00000505553 DDX5P17844 614 aaKnown RBP3.89□□□□□ -1.79
TRAPPC13-208ENST00000505553 GPTP24298 496 aa3.89□□□□□ -1.79
TRAPPC13-208ENST00000505553 RAD23BP54727 409 aa3.89□□□□□ -1.79
TRAPPC13-208ENST00000505553 YPEL5P62699 121 aa3.89□□□□□ -1.79
TRAPPC13-208ENST00000505553 TUBB4BP68371 445 aa3.89□□□□□ -1.79
TRAPPC13-208ENST00000505553 SIM1P81133 766 aaPredicted RBP3.89□□□□□ -1.79
TRAPPC13-208ENST00000505553 FAM27E3Q08E93 113 aa3.89□□□□□ -1.79
TRAPPC13-208ENST00000505553 GRIK2Q13002 908 aa3.89□□□□□ -1.79
TRAPPC13-208ENST00000505553 NEDD9Q14511 834 aa3.89□□□□□ -1.79
TRAPPC13-208ENST00000505553 PKN2Q16513 984 aaKnown RBP3.89□□□□□ -1.79
TRAPPC13-208ENST00000505553 TWISTNBQ3B726 338 aaPredicted RBP3.89□□□□□ -1.79
TRAPPC13-208ENST00000505553 SUPT20HL1Q3ZLR7 823 aa3.89□□□□□ -1.79
TRAPPC13-208ENST00000505553 ZRANB3Q5FWF4 1079 aa3.89□□□□□ -1.79
TRAPPC13-208ENST00000505553 ENTPD8Q5MY95 495 aa3.89□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms