RNA–Protein interactions for RNA: ENST00000504387.5

NEDD9-208, Transcript of neural precursor cell expressed, developmentally down-regulated 9, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene NEDD9, Length 3,211 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD9-208ENST00000504387 HERC3Q15034 1050 aa7.59□□□□□ -1.19
NEDD9-208ENST00000504387 ADPRMQ3LIE5 342 aa7.59□□□□□ -1.19
NEDD9-208ENST00000504387 RBM23Q86U06 439 aaKnown RBP7.59□□□□□ -1.19
NEDD9-208ENST00000504387 AKAP14Q86UN6 197 aa7.59□□□□□ -1.19
NEDD9-208ENST00000504387 ANKRD13BQ86YJ7 626 aa7.59□□□□□ -1.19
NEDD9-208ENST00000504387 ALDH16A1Q8IZ83 802 aa7.59□□□□□ -1.19
NEDD9-208ENST00000504387 C8orf59Q8N0T1 100 aaPredicted RBP7.59□□□□□ -1.19
NEDD9-208ENST00000504387 SCML4Q8N228 414 aa7.59□□□□□ -1.19
NEDD9-208ENST00000504387 HASPINQ8TF76 798 aa7.59□□□□□ -1.19
NEDD9-208ENST00000504387 RAB2BQ8WUD1 216 aa7.59□□□□□ -1.19
NEDD9-208ENST00000504387 NIFKQ9BYG3 293 aaKnown RBP7.59□□□□□ -1.19
NEDD9-208ENST00000504387 RHOBTB2Q9BYZ6 727 aa7.59□□□□□ -1.19
NEDD9-208ENST00000504387 RNF167Q9H6Y7 350 aa7.59□□□□□ -1.19
NEDD9-208ENST00000504387 MRPL40Q9NQ50 206 aaKnown RBP7.59□□□□□ -1.19
NEDD9-208ENST00000504387 GDAP2Q9NXN4 497 aa7.59□□□□□ -1.19
NEDD9-208ENST00000504387 COQ3Q9NZJ6 369 aa7.59□□□□□ -1.19
NEDD9-208ENST00000504387 GOLGA4Q13439 2230 aaKnown RBP7.59□□□□□ -1.19
NEDD9-208ENST00000504387 UBA6A0AVT1 1052 aaPredicted RBP7.59□□□□□ -1.19
NEDD9-208ENST00000504387 ANKRD34BA5PLL1 514 aa7.59□□□□□ -1.19
NEDD9-208ENST00000504387 FXYD1O00168 92 aa7.59□□□□□ -1.19
NEDD9-208ENST00000504387 CCRL2O00421 344 aa7.59□□□□□ -1.19
NEDD9-208ENST00000504387 MSI1O43347 362 aaKnown RBP7.59□□□□□ -1.19
NEDD9-208ENST00000504387 H2AFYO75367 372 aaKnown RBP7.59□□□□□ -1.19
NEDD9-208ENST00000504387 UGT2B4P06133 528 aa7.59□□□□□ -1.19
NEDD9-208ENST00000504387 APOA4P06727 396 aa7.59□□□□□ -1.19
NEDD9-208ENST00000504387 THRBP10828 461 aa7.59□□□□□ -1.19
NEDD9-208ENST00000504387 GPX3P22352 226 aa7.59□□□□□ -1.19
NEDD9-208ENST00000504387 ARSFP54793 590 aa7.59□□□□□ -1.19
NEDD9-208ENST00000504387 CD47Q08722 323 aa7.59□□□□□ -1.19
NEDD9-208ENST00000504387 TRIP4Q15650 581 aaPredicted RBP7.59□□□□□ -1.19
NEDD9-208ENST00000504387 PPP2R2DQ66LE6 453 aa7.59□□□□□ -1.19
NEDD9-208ENST00000504387 RAP1GAP2Q684P5 730 aa7.59□□□□□ -1.19
NEDD9-208ENST00000504387 NEPROQ6NW34 567 aa7.59□□□□□ -1.19
NEDD9-208ENST00000504387 ENPP6Q6UWR7 440 aa7.59□□□□□ -1.19
NEDD9-208ENST00000504387 GALNT10Q86SR1 603 aa7.59□□□□□ -1.19
NEDD9-208ENST00000504387 DPP9Q86TI2 863 aa7.59□□□□□ -1.19
NEDD9-208ENST00000504387 PLD3Q8IV08 490 aa7.59□□□□□ -1.19
NEDD9-208ENST00000504387 TWIST2Q8WVJ9 160 aa7.59□□□□□ -1.19
NEDD9-208ENST00000504387 KLRG1Q96E93 195 aa7.59□□□□□ -1.19
NEDD9-208ENST00000504387 B3GALT6Q96L58 329 aa7.59□□□□□ -1.19
NEDD9-208ENST00000504387 HSFY1Q96LI6 401 aa7.59□□□□□ -1.19
NEDD9-208ENST00000504387 MYRFLQ96LU7 910 aa7.59□□□□□ -1.19
NEDD9-208ENST00000504387 MRPL57Q9BQC6 102 aaKnown RBP7.59□□□□□ -1.19
NEDD9-208ENST00000504387 TRIM15Q9C019 465 aa7.59□□□□□ -1.19
NEDD9-208ENST00000504387 TNKS2Q9H2K2 1166 aa7.59□□□□□ -1.19
NEDD9-208ENST00000504387 RERGLQ9H628 205 aa7.59□□□□□ -1.19
NEDD9-208ENST00000504387 EML4Q9HC35 981 aaKnown RBP7.59□□□□□ -1.19
NEDD9-208ENST00000504387 TXNRD2Q9NNW7 524 aa7.59□□□□□ -1.19
NEDD9-208ENST00000504387 MRGBPQ9NV56 204 aa7.59□□□□□ -1.19
NEDD9-208ENST00000504387 PRMT7Q9NVM4 692 aaPredicted RBP7.59□□□□□ -1.19
NEDD9-208ENST00000504387 C14orf119Q9NWQ9 140 aa7.59□□□□□ -1.19
NEDD9-208ENST00000504387 IL37Q9NZH6 218 aa7.59□□□□□ -1.19
NEDD9-208ENST00000504387 SCHIP1Q9P0W5 487 aaPredicted RBP7.59□□□□□ -1.19
NEDD9-208ENST00000504387 DNMT3BQ9UBC3 853 aaKnown RBP7.59□□□□□ -1.19
NEDD9-208ENST00000504387 ERVK-11Q9UQG0 969 aa7.59□□□□□ -1.19
NEDD9-208ENST00000504387 PDE10AQ9Y233 779 aa7.59□□□□□ -1.19
NEDD9-208ENST00000504387 SNX8Q9Y5X2 465 aa7.59□□□□□ -1.19
NEDD9-208ENST00000504387 DNMT3AQ9Y6K1 912 aaPredicted RBP7.59□□□□□ -1.19
NEDD9-208ENST00000504387 ZNF638Q14966 1978 aaKnown RBP7.59□□□□□ -1.2
NEDD9-208ENST00000504387 KIAA1217Q5T5P2 1943 aa7.58□□□□□ -1.2
NEDD9-208ENST00000504387 IQCA1LA6NCM1 817 aa7.58□□□□□ -1.2
NEDD9-208ENST00000504387 MYO1GB0I1T2 1018 aa7.58□□□□□ -1.2
NEDD9-208ENST00000504387 TARM1B6A8C7 271 aa7.58□□□□□ -1.2
NEDD9-208ENST00000504387 GSTA4O15217 222 aa7.58□□□□□ -1.2
NEDD9-208ENST00000504387 RAD51BO15315 384 aa7.58□□□□□ -1.2
NEDD9-208ENST00000504387 ASNA1O43681 348 aa7.58□□□□□ -1.2
NEDD9-208ENST00000504387 NDUFS2O75306 463 aa7.58□□□□□ -1.2
NEDD9-208ENST00000504387 KATNA1O75449 491 aa7.58□□□□□ -1.2
NEDD9-208ENST00000504387 USP2O75604 605 aaPredicted RBP7.58□□□□□ -1.2
NEDD9-208ENST00000504387 DDNO94850 711 aaPredicted RBP7.58□□□□□ -1.2
NEDD9-208ENST00000504387 PGLSO95336 258 aa7.58□□□□□ -1.2
NEDD9-208ENST00000504387 GOT2P00505 430 aaKnown RBP7.58□□□□□ -1.2
NEDD9-208ENST00000504387 HTR1AP08908 422 aa7.58□□□□□ -1.2
NEDD9-208ENST00000504387 CDH1P12830 882 aa7.58□□□□□ -1.2
NEDD9-208ENST00000504387 CYP2B6P20813 491 aa7.58□□□□□ -1.2
NEDD9-208ENST00000504387 S100A1P23297 94 aa7.58□□□□□ -1.2
NEDD9-208ENST00000504387 KCNK10P57789 538 aa7.58□□□□□ -1.2
NEDD9-208ENST00000504387 IFITM2Q01629 132 aa7.58□□□□□ -1.2
NEDD9-208ENST00000504387 MBTD1Q05BQ5 628 aa7.58□□□□□ -1.2
NEDD9-208ENST00000504387 CDH17Q12864 832 aa7.58□□□□□ -1.2
NEDD9-208ENST00000504387 KCNAB2Q13303 367 aa7.58□□□□□ -1.2
NEDD9-208ENST00000504387 GTF2H3Q13889 308 aa7.58□□□□□ -1.2
NEDD9-208ENST00000504387 TTLL4Q14679 1199 aa7.58□□□□□ -1.2
NEDD9-208ENST00000504387 SGO1Q5FBB7 561 aa7.58□□□□□ -1.2
NEDD9-208ENST00000504387 THAP5Q7Z6K1 395 aa7.58□□□□□ -1.2
NEDD9-208ENST00000504387 CELF2-AS1Q8N7Q2 184 aa7.58□□□□□ -1.2
NEDD9-208ENST00000504387 MFSD2AQ8NA29 543 aa7.58□□□□□ -1.2
NEDD9-208ENST00000504387 CHST13Q8NET6 341 aa7.58□□□□□ -1.2
NEDD9-208ENST00000504387 ITFG1Q8TB96 612 aa7.58□□□□□ -1.2
NEDD9-208ENST00000504387 NSMCE2Q96MF7 247 aa7.58□□□□□ -1.2
NEDD9-208ENST00000504387 CYP2S1Q96SQ9 504 aa7.58□□□□□ -1.2
NEDD9-208ENST00000504387 THUMPD3Q9BV44 507 aaKnown RBP7.58□□□□□ -1.2
NEDD9-208ENST00000504387 MROQ9BYG7 248 aa7.58□□□□□ -1.2
NEDD9-208ENST00000504387 ROGDIQ9GZN7 287 aa7.58□□□□□ -1.2
NEDD9-208ENST00000504387 SMOC2Q9H3U7 446 aa7.58□□□□□ -1.2
NEDD9-208ENST00000504387 NXF3Q9H4D5 531 aaKnown RBP7.58□□□□□ -1.2
NEDD9-208ENST00000504387 RIBC2Q9H4K1 309 aa7.58□□□□□ -1.2
NEDD9-208ENST00000504387 SARS2Q9NP81 518 aaKnown RBP7.58□□□□□ -1.2
NEDD9-208ENST00000504387 ARMC1Q9NVT9 282 aa7.58□□□□□ -1.2
NEDD9-208ENST00000504387 TUBA8Q9NY65 449 aaPredicted RBP7.58□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms