RNA–Protein interactions for RNA: ENST00000503742.5

UBE2D3-216, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

TSL 1 (best)

Gene UBE2D3, Length 1,977 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-216ENST00000503742 ECT2LQ008S8 904 aa21.21■□□□□ 0.99
UBE2D3-216ENST00000503742 UNC50Q53HI1 259 aa21.21■□□□□ 0.99
UBE2D3-216ENST00000503742 RPS27LQ71UM5 84 aaKnown RBP21.21■□□□□ 0.99
UBE2D3-216ENST00000503742 ADIPOR2Q86V24 386 aa21.21■□□□□ 0.99
UBE2D3-216ENST00000503742 NKAPQ8N5F7 415 aaKnown RBP21.21■□□□□ 0.99
UBE2D3-216ENST00000503742 MAELQ96JY0 434 aaKnown RBP21.21■□□□□ 0.99
UBE2D3-216ENST00000503742 ERVK-6Q9BXR3 956 aa21.21■□□□□ 0.99
UBE2D3-216ENST00000503742 MMADHCQ9H3L0 296 aaPredicted RBP21.21■□□□□ 0.99
UBE2D3-216ENST00000503742 SUV39H2Q9H5I1 410 aa21.21■□□□□ 0.99
UBE2D3-216ENST00000503742 TNFRSF12AQ9NP84 129 aa21.21■□□□□ 0.99
UBE2D3-216ENST00000503742 SLCO3A1Q9UIG8 710 aa21.21■□□□□ 0.99
UBE2D3-216ENST00000503742 IKZF3Q9UKT9 509 aa21.21■□□□□ 0.99
UBE2D3-216ENST00000503742 CDYLQ9Y232 598 aa21.21■□□□□ 0.99
UBE2D3-216ENST00000503742 GOLGA8QA0A0J9YX86 632 aa21.21■□□□□ 0.99
UBE2D3-216ENST00000503742 GOLGA8OA6NCC3 632 aa21.21■□□□□ 0.99
UBE2D3-216ENST00000503742 GOLGA8NF8WBI6 632 aa21.21■□□□□ 0.99
UBE2D3-216ENST00000503742 TSPAN12O95859 305 aa21.21■□□□□ 0.99
UBE2D3-216ENST00000503742 CARD16Q5EG05 197 aa21.21■□□□□ 0.99
UBE2D3-216ENST00000503742 ACAD11Q709F0 780 aa21.21■□□□□ 0.99
UBE2D3-216ENST00000503742 CUZD1Q86UP6 607 aa21.21■□□□□ 0.99
UBE2D3-216ENST00000503742 CBARPQ8N350 705 aaPredicted RBP21.21■□□□□ 0.99
UBE2D3-216ENST00000503742 GIMAP7Q8NHV1 300 aa21.21■□□□□ 0.99
UBE2D3-216ENST00000503742 STAG3L4Q8TBR4 150 aa21.21■□□□□ 0.99
UBE2D3-216ENST00000503742 CD200R1Q8TD46 325 aa21.21■□□□□ 0.99
UBE2D3-216ENST00000503742 TBRG4Q969Z0 631 aaKnown RBP eCLIP21.21■□□□□ 0.99
UBE2D3-216ENST00000503742 FAR2Q96K12 515 aa21.21■□□□□ 0.99
UBE2D3-216ENST00000503742 IL26Q9NPH9 171 aa21.21■□□□□ 0.99
UBE2D3-216ENST00000503742 GTSE1Q9NYZ3 720 aa21.21■□□□□ 0.99
UBE2D3-216ENST00000503742 DPP7Q9UHL4 492 aa21.21■□□□□ 0.99
UBE2D3-216ENST00000503742 PLA2G4CQ9UP65 541 aa21.21■□□□□ 0.99
UBE2D3-216ENST00000503742 WNT6Q9Y6F9 365 aa21.21■□□□□ 0.99
UBE2D3-216ENST00000503742 CHD9Q3L8U1 2897 aa21.2■□□□□ 0.98
UBE2D3-216ENST00000503742 GRXCR1A8MXD5 290 aa21.2■□□□□ 0.98
UBE2D3-216ENST00000503742 UBXN8O00124 270 aa21.2■□□□□ 0.98
UBE2D3-216ENST00000503742 NEMP1O14524 444 aa21.2■□□□□ 0.98
UBE2D3-216ENST00000503742 DCXO43602 365 aa21.2■□□□□ 0.98
UBE2D3-216ENST00000503742 PRAMEF1O95521 474 aa21.2■□□□□ 0.98
UBE2D3-216ENST00000503742 BPIP17213 487 aa21.2■□□□□ 0.98
UBE2D3-216ENST00000503742 PRDX6P30041 224 aa21.2■□□□□ 0.98
UBE2D3-216ENST00000503742 CCNHP51946 323 aaPredicted RBP21.2■□□□□ 0.98
UBE2D3-216ENST00000503742 NAA25Q14CX7 972 aa21.2■□□□□ 0.98
UBE2D3-216ENST00000503742 PDCD2Q16342 344 aaPredicted RBP21.2■□□□□ 0.98
UBE2D3-216ENST00000503742 WASHC2DQ5SRD0 308 aa21.2■□□□□ 0.98
UBE2D3-216ENST00000503742 FAM151BQ6UXP7 276 aa21.2■□□□□ 0.98
UBE2D3-216ENST00000503742 SNX20Q7Z614 316 aa21.2■□□□□ 0.98
UBE2D3-216ENST00000503742 SIDT2Q8NBJ9 832 aaKnown RBP21.2■□□□□ 0.98
UBE2D3-216ENST00000503742 ZNF385DQ9H6B1 395 aa21.2■□□□□ 0.98
UBE2D3-216ENST00000503742 TRMT6Q9UJA5 497 aaKnown RBP21.2■□□□□ 0.98
UBE2D3-216ENST00000503742 APPL1Q9UKG1 709 aa21.2■□□□□ 0.98
UBE2D3-216ENST00000503742 TRBV5-4A0A0C4DH59 114 aa21.19■□□□□ 0.98
UBE2D3-216ENST00000503742 NPIPB15A6NHN6 443 aaPredicted RBP21.19■□□□□ 0.98
UBE2D3-216ENST00000503742 TRPC5OSA6NMA1 111 aa21.19■□□□□ 0.98
UBE2D3-216ENST00000503742 UBFD1O14562 309 aaKnown RBP21.19■□□□□ 0.98
UBE2D3-216ENST00000503742 PRMT5O14744 637 aaPredicted RBP21.19■□□□□ 0.98
UBE2D3-216ENST00000503742 POP4O95707 220 aaKnown RBP21.19■□□□□ 0.98
UBE2D3-216ENST00000503742 CA3P07451 260 aa21.19■□□□□ 0.98
UBE2D3-216ENST00000503742 CA5AP35218 305 aa21.19■□□□□ 0.98
UBE2D3-216ENST00000503742 CPOXP36551 454 aa21.19■□□□□ 0.98
UBE2D3-216ENST00000503742 KLF10Q13118 480 aa21.19■□□□□ 0.98
UBE2D3-216ENST00000503742 CBX2Q14781 532 aaPredicted RBP21.19■□□□□ 0.98
UBE2D3-216ENST00000503742 TMEM215Q68D42 235 aa21.19■□□□□ 0.98
UBE2D3-216ENST00000503742 FAM109BQ6ICB4 259 aaPredicted RBP21.19■□□□□ 0.98
UBE2D3-216ENST00000503742 DPY19L3Q6ZPD9 716 aa21.19■□□□□ 0.98
UBE2D3-216ENST00000503742 SERPINA9Q86WD7 417 aa21.19■□□□□ 0.98
UBE2D3-216ENST00000503742 PAF1Q8N7H5 531 aa21.19■□□□□ 0.98
UBE2D3-216ENST00000503742 PTGR2Q8N8N7 351 aaPredicted RBP21.19■□□□□ 0.98
UBE2D3-216ENST00000503742 ING5Q8WYH8 240 aa21.19■□□□□ 0.98
UBE2D3-216ENST00000503742 MCUR1Q96AQ8 359 aa21.19■□□□□ 0.98
UBE2D3-216ENST00000503742 SCRN2Q96FV2 425 aa21.19■□□□□ 0.98
UBE2D3-216ENST00000503742 PPP1R36Q96LQ0 422 aa21.19■□□□□ 0.98
UBE2D3-216ENST00000503742 DENND2DQ9H6A0 471 aaPredicted RBP21.19■□□□□ 0.98
UBE2D3-216ENST00000503742 PCDHB1Q9Y5F3 818 aa21.19■□□□□ 0.98
UBE2D3-216ENST00000503742 SDHDO14521 159 aa21.19■□□□□ 0.98
UBE2D3-216ENST00000503742 MAGEC1O60732 1142 aa21.19■□□□□ 0.98
UBE2D3-216ENST00000503742 SUPT7LO94864 414 aa21.19■□□□□ 0.98
UBE2D3-216ENST00000503742 RPS3P23396 243 aaKnown RBP eCLIP21.19■□□□□ 0.985e-12■□□□□ 9.4
UBE2D3-216ENST00000503742 CLCN7P51798 805 aa21.19■□□□□ 0.98
UBE2D3-216ENST00000503742 NFATC2Q13469 925 aa21.19■□□□□ 0.98
UBE2D3-216ENST00000503742 ACCSLQ4AC99 568 aa21.19■□□□□ 0.98
UBE2D3-216ENST00000503742 CRTC1Q6UUV9 634 aa21.19■□□□□ 0.98
UBE2D3-216ENST00000503742 TPRG1Q6ZUI0 275 aa21.19■□□□□ 0.98
UBE2D3-216ENST00000503742 TSPAN33Q86UF1 283 aa21.19■□□□□ 0.98
UBE2D3-216ENST00000503742 PLPP6Q8IY26 295 aa21.19■□□□□ 0.98
UBE2D3-216ENST00000503742 CPSF7Q8N684 471 aaKnown RBP21.19■□□□□ 0.98
UBE2D3-216ENST00000503742 AGAP11Q8TF27 550 aa21.19■□□□□ 0.98
UBE2D3-216ENST00000503742 EXT2Q93063 718 aa21.19■□□□□ 0.98
UBE2D3-216ENST00000503742 CMTM5Q96DZ9 223 aa21.19■□□□□ 0.98
UBE2D3-216ENST00000503742 ZNF641Q96N77 438 aaPredicted RBP21.19■□□□□ 0.98
UBE2D3-216ENST00000503742 MCCC1Q96RQ3 725 aaPredicted RBP21.19■□□□□ 0.98
UBE2D3-216ENST00000503742 SLC2A11Q9BYW1 496 aa21.19■□□□□ 0.98
UBE2D3-216ENST00000503742 MRPS23Q9Y3D9 190 aaKnown RBP21.19■□□□□ 0.98
UBE2D3-216ENST00000503742 CCDC189A1A4V9 331 aa21.18■□□□□ 0.98
UBE2D3-216ENST00000503742 SATB1Q01826 763 aa21.18■□□□□ 0.98
UBE2D3-216ENST00000503742 GPM6BQ13491 265 aa21.18■□□□□ 0.98
UBE2D3-216ENST00000503742 DNAL1Q4LDG9 190 aa21.18■□□□□ 0.98
UBE2D3-216ENST00000503742 KIRREL3Q8IZU9 778 aa21.18■□□□□ 0.98
UBE2D3-216ENST00000503742 POU5F2Q8N7G0 328 aa21.18■□□□□ 0.98
UBE2D3-216ENST00000503742 ITFG1Q8TB96 612 aa21.18■□□□□ 0.98
UBE2D3-216ENST00000503742 NUP210Q8TEM1 1887 aaPredicted RBP21.18■□□□□ 0.98
UBE2D3-216ENST00000503742 FUBP1Q96AE4 644 aaKnown RBP21.18■□□□□ 0.98
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms