RNA–Protein interactions for RNA: ENST00000502948.1

LSM3P4-201, Transcript of LSM3 homolog, U6 small nuclear RNA and mRNA degradation associated pseudogene 4, humanhuman

BASIC

Gene LSM3P4, Length 309 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM3P4-201ENST00000502948 MOSPD1Q9UJG1 213 aa6.06□□□□□ -1.44
LSM3P4-201ENST00000502948 PCDHGA6Q9Y5G7 932 aa6.06□□□□□ -1.44
LSM3P4-201ENST00000502948 B3GALT1Q9Y5Z6 326 aa6.06□□□□□ -1.44
LSM3P4-201ENST00000502948 ADGRG1Q9Y653 693 aa6.06□□□□□ -1.44
LSM3P4-201ENST00000502948 SMTNL1A8MU46 457 aa6.05□□□□□ -1.44
LSM3P4-201ENST00000502948 CHUKO15111 745 aa6.05□□□□□ -1.44
LSM3P4-201ENST00000502948 DLGAP3O95886 979 aa6.05□□□□□ -1.44
LSM3P4-201ENST00000502948 MBD3O95983 291 aa6.05□□□□□ -1.44
LSM3P4-201ENST00000502948 PRLP01236 227 aa6.05□□□□□ -1.44
LSM3P4-201ENST00000502948 CYP1A2P05177 515 aa6.05□□□□□ -1.44
LSM3P4-201ENST00000502948 PDHA1P08559 390 aa6.05□□□□□ -1.44
LSM3P4-201ENST00000502948 MX2P20592 715 aa6.05□□□□□ -1.44
LSM3P4-201ENST00000502948 AMPD1P23109 780 aa6.05□□□□□ -1.44
LSM3P4-201ENST00000502948 POLD2P49005 469 aa6.05□□□□□ -1.44
LSM3P4-201ENST00000502948 SPINT3P49223 89 aa6.05□□□□□ -1.44
LSM3P4-201ENST00000502948 ZNF165P49910 485 aa6.05□□□□□ -1.44
LSM3P4-201ENST00000502948 FOXK1P85037 733 aa6.05□□□□□ -1.44
LSM3P4-201ENST00000502948 TLE1Q04724 770 aa6.05□□□□□ -1.44
LSM3P4-201ENST00000502948 KLHL30Q0D2K2 578 aa6.05□□□□□ -1.44
LSM3P4-201ENST00000502948 NR1I3Q14994 352 aa6.05□□□□□ -1.44
LSM3P4-201ENST00000502948 PDK2Q15119 407 aa6.05□□□□□ -1.44
LSM3P4-201ENST00000502948 ASIC2Q16515 512 aa6.05□□□□□ -1.44
LSM3P4-201ENST00000502948 HADHQ16836 314 aaKnown RBP6.05□□□□□ -1.44
LSM3P4-201ENST00000502948 FILIP1LQ4L180 1135 aa6.05□□□□□ -1.44
LSM3P4-201ENST00000502948 ANKRD20A8PQ5CZ79 823 aa6.05□□□□□ -1.44
LSM3P4-201ENST00000502948 CCDC183Q5T5S1 534 aa6.05□□□□□ -1.44
LSM3P4-201ENST00000502948 HGSNATQ68CP4 663 aa6.05□□□□□ -1.44
LSM3P4-201ENST00000502948 ABRAXAS1Q6UWZ7 409 aa6.05□□□□□ -1.44
LSM3P4-201ENST00000502948 SLC9B2Q86UD5 537 aa6.05□□□□□ -1.44
LSM3P4-201ENST00000502948 TSPAN33Q86UF1 283 aa6.05□□□□□ -1.44
LSM3P4-201ENST00000502948 VASH2Q86V25 355 aa6.05□□□□□ -1.44
LSM3P4-201ENST00000502948 BPHLQ86WA6 291 aaPredicted RBP6.05□□□□□ -1.44
LSM3P4-201ENST00000502948 PLXDC1Q8IUK5 500 aa6.05□□□□□ -1.44
LSM3P4-201ENST00000502948 TP53INP2Q8IXH6 220 aa6.05□□□□□ -1.44
LSM3P4-201ENST00000502948 PAF1Q8N7H5 531 aa6.05□□□□□ -1.44
LSM3P4-201ENST00000502948 RCBTB1Q8NDN9 531 aa6.05□□□□□ -1.44
LSM3P4-201ENST00000502948 ARRDC2Q8TBH0 407 aa6.05□□□□□ -1.44
LSM3P4-201ENST00000502948 PDCD6IPQ8WUM4 868 aaKnown RBP6.05□□□□□ -1.44
LSM3P4-201ENST00000502948 APOBEC4Q8WW27 367 aaKnown RBP6.05□□□□□ -1.44
LSM3P4-201ENST00000502948 PATE1Q8WXA2 126 aa6.05□□□□□ -1.44
LSM3P4-201ENST00000502948 ART4Q93070 314 aa6.05□□□□□ -1.44
LSM3P4-201ENST00000502948 KIAA1143Q96AT1 154 aaPredicted RBP6.05□□□□□ -1.44
LSM3P4-201ENST00000502948 ZNF653Q96CK0 615 aa6.05□□□□□ -1.44
LSM3P4-201ENST00000502948 HDAC11Q96DB2 347 aa6.05□□□□□ -1.44
LSM3P4-201ENST00000502948 AHCYL2Q96HN2 611 aaKnown RBP6.05□□□□□ -1.44
LSM3P4-201ENST00000502948 GBP4Q96PP9 640 aa6.05□□□□□ -1.44
LSM3P4-201ENST00000502948 ZSCAN5AQ9BUG6 496 aa6.05□□□□□ -1.44
LSM3P4-201ENST00000502948 TRIM7Q9C029 511 aa6.05□□□□□ -1.44
LSM3P4-201ENST00000502948 PCDH18Q9HCL0 1135 aa6.05□□□□□ -1.44
LSM3P4-201ENST00000502948 STAU2Q9NUL3 570 aaKnown RBP eCLIP6.05□□□□□ -1.44
LSM3P4-201ENST00000502948 ETNK2Q9NVF9 386 aa6.05□□□□□ -1.44
LSM3P4-201ENST00000502948 OCIAD1Q9NX40 245 aa6.05□□□□□ -1.44
LSM3P4-201ENST00000502948 SIDT1Q9NXL6 827 aaKnown RBP6.05□□□□□ -1.44
LSM3P4-201ENST00000502948 PKD2L2Q9NZM6 624 aa6.05□□□□□ -1.44
LSM3P4-201ENST00000502948 EPHA6Q9UF33 1036 aa6.05□□□□□ -1.44
LSM3P4-201ENST00000502948 CNOT6Q9ULM6 557 aaKnown RBP6.05□□□□□ -1.44
LSM3P4-201ENST00000502948 KCTD3Q9Y597 815 aa6.05□□□□□ -1.44
LSM3P4-201ENST00000502948 PTPN13Q12923 2485 aa6.04□□□□□ -1.44
LSM3P4-201ENST00000502948 FAM170AA1A519 330 aa6.04□□□□□ -1.44
LSM3P4-201ENST00000502948 EFCAB7A8K855 629 aa6.04□□□□□ -1.44
LSM3P4-201ENST00000502948 A8MX80 341 aa6.04□□□□□ -1.44
LSM3P4-201ENST00000502948 GOLGA6L22H0YM25 854 aa6.04□□□□□ -1.44
LSM3P4-201ENST00000502948 MYO1FO00160 1098 aa6.04□□□□□ -1.44
LSM3P4-201ENST00000502948 POLR1CO15160 346 aaPredicted RBP6.04□□□□□ -1.44
LSM3P4-201ENST00000502948 ATMINO43313 823 aaPredicted RBP6.04□□□□□ -1.44
LSM3P4-201ENST00000502948 VEGFDO43915 354 aa6.04□□□□□ -1.44
LSM3P4-201ENST00000502948 MT-ND3P03897 115 aa6.04□□□□□ -1.44
LSM3P4-201ENST00000502948 KRT7P08729 469 aa6.04□□□□□ -1.44
LSM3P4-201ENST00000502948 STAT5AP42229 794 aa6.04□□□□□ -1.44
LSM3P4-201ENST00000502948 MAXP61244 160 aa6.04□□□□□ -1.44
LSM3P4-201ENST00000502948 UBE2IP63279 158 aaKnown RBP6.04□□□□□ -1.44
LSM3P4-201ENST00000502948 IFI35P80217 286 aaPredicted RBP6.04□□□□□ -1.44
LSM3P4-201ENST00000502948 CDC20Q12834 499 aa6.04□□□□□ -1.44
LSM3P4-201ENST00000502948 SEPT6Q14141 434 aa6.04□□□□□ -1.44
LSM3P4-201ENST00000502948 UBAP2LQ14157 1087 aaKnown RBP6.04□□□□□ -1.44
LSM3P4-201ENST00000502948 DPYSL3Q14195 570 aa6.04□□□□□ -1.44
LSM3P4-201ENST00000502948 SMTNL2Q2TAL5 461 aa6.04□□□□□ -1.44
LSM3P4-201ENST00000502948 COLEC12Q5KU26 742 aa6.04□□□□□ -1.44
LSM3P4-201ENST00000502948 CCDC122Q5T0U0 273 aa6.04□□□□□ -1.44
LSM3P4-201ENST00000502948 AGAP9Q5VTM2 703 aa6.04□□□□□ -1.44
LSM3P4-201ENST00000502948 NKAIN2Q5VXU1 208 aa6.04□□□□□ -1.44
LSM3P4-201ENST00000502948 ANKS6Q68DC2 871 aa6.04□□□□□ -1.44
LSM3P4-201ENST00000502948 NCBP2-AS2Q69YL0 99 aa6.04□□□□□ -1.44
LSM3P4-201ENST00000502948 TCTN3Q6NUS6 607 aa6.04□□□□□ -1.44
LSM3P4-201ENST00000502948 PRSS42Q7Z5A4 293 aa6.04□□□□□ -1.44
LSM3P4-201ENST00000502948 PHYKPLQ8IUZ5 450 aa6.04□□□□□ -1.44
LSM3P4-201ENST00000502948 APLFQ8IW19 511 aaPredicted RBP6.04□□□□□ -1.44
LSM3P4-201ENST00000502948 MAP7D3Q8IWC1 876 aa6.04□□□□□ -1.44
LSM3P4-201ENST00000502948 CARFQ8N187 725 aa6.04□□□□□ -1.44
LSM3P4-201ENST00000502948 C9orf43Q8TAL5 461 aaPredicted RBP6.04□□□□□ -1.44
LSM3P4-201ENST00000502948 CCHCR1Q8TD31 782 aa6.04□□□□□ -1.44
LSM3P4-201ENST00000502948 PTCD2Q8WV60 388 aaKnown RBP6.04□□□□□ -1.44
LSM3P4-201ENST00000502948 SCAMP4Q969E2 229 aa6.04□□□□□ -1.44
LSM3P4-201ENST00000502948 PMEPA1Q969W9 287 aa6.04□□□□□ -1.44
LSM3P4-201ENST00000502948 TADA1Q96BN2 335 aa6.04□□□□□ -1.44
LSM3P4-201ENST00000502948 VPS35Q96QK1 796 aa6.04□□□□□ -1.44
LSM3P4-201ENST00000502948 WDR24Q96S15 920 aa6.04□□□□□ -1.44
LSM3P4-201ENST00000502948 TIMM29Q9BSF4 260 aa6.04□□□□□ -1.44
LSM3P4-201ENST00000502948 RIOK2Q9BVS4 552 aaKnown RBP6.04□□□□□ -1.44
LSM3P4-201ENST00000502948 ADGRE3Q9BY15 652 aa6.04□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 54.8 ms