RNA–Protein interactions for RNA: ENST00000498658.5

FXR1-222, Transcript of FMR1 autosomal homolog 1, human

TSL 2

Gene FXR1, Length 683 nt, Biotype retained intron, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
FXR1-222	ENST00000498658	ZKSCAN5	Q9Y2L8	839 aa		10.44	□□□□□ -0.74
FXR1-222	ENST00000498658	PKP3	Q9Y446	797 aa		10.44	□□□□□ -0.74
FXR1-222	ENST00000498658	GPSM3	Q9Y4H4	160 aa		10.44	□□□□□ -0.74
FXR1-222	ENST00000498658		U3KQA8	63 aa		10.44	□□□□□ -0.74
FXR1-222	ENST00000498658	ASPM	Q8IZT6	3477 aa		10.43	□□□□□ -0.74
FXR1-222	ENST00000498658	C2orf81	A6NN90	581 aa		10.43	□□□□□ -0.74
FXR1-222	ENST00000498658	INPP4B	O15327	924 aa		10.43	□□□□□ -0.74
FXR1-222	ENST00000498658	SLC25A14	O95258	325 aa	Predicted RBP	10.43	□□□□□ -0.74
FXR1-222	ENST00000498658	CRTAM	O95727	393 aa		10.43	□□□□□ -0.74
FXR1-222	ENST00000498658	MT-CO3	P00414	261 aa		10.43	□□□□□ -0.74
FXR1-222	ENST00000498658	SLC4A1	P02730	911 aa		10.43	□□□□□ -0.74
FXR1-222	ENST00000498658	CELA2B	P08218	269 aa	Predicted RBP	10.43	□□□□□ -0.74
FXR1-222	ENST00000498658	PIRT	P0C851	137 aa		10.43	□□□□□ -0.74
FXR1-222	ENST00000498658	MSN	P26038	577 aa	Known RBP	10.43	□□□□□ -0.74
FXR1-222	ENST00000498658	PSMB4	P28070	264 aa		10.43	□□□□□ -0.74
FXR1-222	ENST00000498658	ADCY8	P40145	1251 aa		10.43	□□□□□ -0.74
FXR1-222	ENST00000498658	POLD2	P49005	469 aa		10.43	□□□□□ -0.74
FXR1-222	ENST00000498658	TARDBP	Q13148	414 aa	Known RBP eCLIP	10.43	□□□□□ -0.74
FXR1-222	ENST00000498658	BIRC2	Q13490	618 aa		10.43	□□□□□ -0.74
FXR1-222	ENST00000498658	ST3GAL2	Q16842	350 aa		10.43	□□□□□ -0.74
FXR1-222	ENST00000498658	C14orf28	Q4W4Y0	310 aa		10.43	□□□□□ -0.74
FXR1-222	ENST00000498658	PYCR3	Q53H96	274 aa		10.43	□□□□□ -0.74
FXR1-222	ENST00000498658	CDCP2	Q5VXM1	449 aa		10.43	□□□□□ -0.74
FXR1-222	ENST00000498658	GUSBP11	Q6P575	273 aa		10.43	□□□□□ -0.74
FXR1-222	ENST00000498658	DOK6	Q6PKX4	331 aa		10.43	□□□□□ -0.74
FXR1-222	ENST00000498658	RANBP10	Q6VN20	620 aa		10.43	□□□□□ -0.74
FXR1-222	ENST00000498658	SLC13A5	Q86YT5	568 aa	Predicted RBP	10.43	□□□□□ -0.74
FXR1-222	ENST00000498658	SLC25A41	Q8N5S1	370 aa		10.43	□□□□□ -0.74
FXR1-222	ENST00000498658	FAM71D	Q8N9W8	422 aa		10.43	□□□□□ -0.74
FXR1-222	ENST00000498658	GPR26	Q8NDV2	337 aa		10.43	□□□□□ -0.74
FXR1-222	ENST00000498658	GPR156	Q8NFN8	814 aa		10.43	□□□□□ -0.74
FXR1-222	ENST00000498658	SLC35B2	Q8TB61	432 aa		10.43	□□□□□ -0.74
FXR1-222	ENST00000498658	CCDC110	Q8TBZ0	833 aa		10.43	□□□□□ -0.74
FXR1-222	ENST00000498658	BLOC1S5	Q8TDH9	187 aa		10.43	□□□□□ -0.74
FXR1-222	ENST00000498658	PTCD2	Q8WV60	388 aa	Known RBP	10.43	□□□□□ -0.74
FXR1-222	ENST00000498658	EID2B	Q96D98	161 aa		10.43	□□□□□ -0.74
FXR1-222	ENST00000498658	NXPE2	Q96DL1	559 aa		10.43	□□□□□ -0.74
FXR1-222	ENST00000498658	VPS35	Q96QK1	796 aa		10.43	□□□□□ -0.74
FXR1-222	ENST00000498658	WDR24	Q96S15	920 aa		10.43	□□□□□ -0.74
FXR1-222	ENST00000498658	AGAP2	Q99490	1192 aa		10.43	□□□□□ -0.74
FXR1-222	ENST00000498658	NRSN2	Q9GZP1	204 aa		10.43	□□□□□ -0.74
FXR1-222	ENST00000498658	CCDC86	Q9H6F5	360 aa	Known RBP	10.43	□□□□□ -0.74
FXR1-222	ENST00000498658	CAAP1	Q9H8G2	361 aa		10.43	□□□□□ -0.74
FXR1-222	ENST00000498658	C10orf88	Q9H8K7	445 aa		10.43	□□□□□ -0.74
FXR1-222	ENST00000498658	TAAR2	Q9P1P5	351 aa		10.43	□□□□□ -0.74
FXR1-222	ENST00000498658	SIRPG	Q9P1W8	387 aa		10.43	□□□□□ -0.74
FXR1-222	ENST00000498658	ZNHIT2	Q9UHR6	403 aa		10.43	□□□□□ -0.74
FXR1-222	ENST00000498658	APPL1	Q9UKG1	709 aa		10.43	□□□□□ -0.74
FXR1-222	ENST00000498658	CNOT6	Q9ULM6	557 aa	Known RBP	10.43	□□□□□ -0.74
FXR1-222	ENST00000498658	PPP2R2C	Q9Y2T4	447 aa		10.43	□□□□□ -0.74
FXR1-222	ENST00000498658	TMEM98	Q9Y2Y6	226 aa		10.43	□□□□□ -0.74
FXR1-222	ENST00000498658	FRY	Q5TBA9	3013 aa		10.42	□□□□□ -0.74
FXR1-222	ENST00000498658	FAM149A	A5PLN7	773 aa		10.42	□□□□□ -0.74
FXR1-222	ENST00000498658	TRABD2B	A6NFA1	517 aa		10.42	□□□□□ -0.74
FXR1-222	ENST00000498658	ERI2	A8K979	691 aa	Known RBP	10.42	□□□□□ -0.74
FXR1-222	ENST00000498658	FADS2P1	A8MWK0	482 aa		10.42	□□□□□ -0.74
FXR1-222	ENST00000498658	TMX2-CTNND1	H3BSU7	103 aa		10.42	□□□□□ -0.74
FXR1-222	ENST00000498658	ZSCAN12	O43309	604 aa		10.42	□□□□□ -0.74
FXR1-222	ENST00000498658	NUDT21	O43809	227 aa	Known RBP	10.42	□□□□□ -0.74
FXR1-222	ENST00000498658	VEGFD	O43915	354 aa		10.42	□□□□□ -0.74
FXR1-222	ENST00000498658	NUAK1	O60285	661 aa		10.42	□□□□□ -0.74
FXR1-222	ENST00000498658	GAS8	O95995	478 aa		10.42	□□□□□ -0.74
FXR1-222	ENST00000498658	AGT	P01019	485 aa		10.42	□□□□□ -0.74
FXR1-222	ENST00000498658	SLC2A4	P14672	509 aa		10.42	□□□□□ -0.74
FXR1-222	ENST00000498658	BPI	P17213	487 aa		10.42	□□□□□ -0.74
FXR1-222	ENST00000498658	LPO	P22079	712 aa	Predicted RBP	10.42	□□□□□ -0.74
FXR1-222	ENST00000498658	SPAM1	P38567	509 aa		10.42	□□□□□ -0.74
FXR1-222	ENST00000498658	CTBS	Q01459	385 aa		10.42	□□□□□ -0.74
FXR1-222	ENST00000498658	ITGA9	Q13797	1035 aa		10.42	□□□□□ -0.74
FXR1-222	ENST00000498658	TCEA2	Q15560	299 aa		10.42	□□□□□ -0.74
FXR1-222	ENST00000498658	TAF1A	Q15573	450 aa	Predicted RBP	10.42	□□□□□ -0.74
FXR1-222	ENST00000498658	CERCAM	Q5T4B2	595 aa		10.42	□□□□□ -0.74
FXR1-222	ENST00000498658	ALS2CL	Q60I27	953 aa		10.42	□□□□□ -0.74
FXR1-222	ENST00000498658	KCTD16	Q68DU8	428 aa		10.42	□□□□□ -0.74
FXR1-222	ENST00000498658	RBM44	Q6ZP01	1051 aa	Known RBP	10.42	□□□□□ -0.74
FXR1-222	ENST00000498658	LINC00523	Q86TU6	105 aa		10.42	□□□□□ -0.74
FXR1-222	ENST00000498658	KLHDC8B	Q8IXV7	354 aa		10.42	□□□□□ -0.74
FXR1-222	ENST00000498658	LSMEM2	Q8N112	164 aa		10.42	□□□□□ -0.74
FXR1-222	ENST00000498658	AVL9	Q8NBF6	648 aa		10.42	□□□□□ -0.74
FXR1-222	ENST00000498658	KY	Q8NBH2	561 aa		10.42	□□□□□ -0.74
FXR1-222	ENST00000498658	BRSK1	Q8TDC3	778 aa		10.42	□□□□□ -0.74
FXR1-222	ENST00000498658	ZDHHC1	Q8WTX9	485 aa		10.42	□□□□□ -0.74
FXR1-222	ENST00000498658	ZCCHC14	Q8WYQ9	949 aa	Known RBP	10.42	□□□□□ -0.74
FXR1-222	ENST00000498658	GLYATL1	Q969I3	302 aa		10.42	□□□□□ -0.74
FXR1-222	ENST00000498658	RTP4	Q96DX8	246 aa		10.42	□□□□□ -0.74
FXR1-222	ENST00000498658	TTC25	Q96NG3	672 aa		10.42	□□□□□ -0.74
FXR1-222	ENST00000498658	FAM118B	Q9BPY3	351 aa		10.42	□□□□□ -0.74
FXR1-222	ENST00000498658	TBL1Y	Q9BQ87	522 aa		10.42	□□□□□ -0.74
FXR1-222	ENST00000498658	CCDC3	Q9BQI4	270 aa		10.42	□□□□□ -0.74
FXR1-222	ENST00000498658	TMEM121	Q9BTD3	319 aa		10.42	□□□□□ -0.74
FXR1-222	ENST00000498658	FICD	Q9BVA6	458 aa		10.42	□□□□□ -0.74
FXR1-222	ENST00000498658	ZCCHC2	Q9C0B9	1178 aa	Known RBP	10.42	□□□□□ -0.74
FXR1-222	ENST00000498658	LRRC40	Q9H9A6	602 aa		10.42	□□□□□ -0.74
FXR1-222	ENST00000498658	ARNT2	Q9HBZ2	717 aa		10.42	□□□□□ -0.74
FXR1-222	ENST00000498658	HOMER3	Q9NSC5	361 aa		10.42	□□□□□ -0.74
FXR1-222	ENST00000498658	IL17C	Q9P0M4	197 aa		10.42	□□□□□ -0.74
FXR1-222	ENST00000498658	SPO11	Q9Y5K1	396 aa		10.42	□□□□□ -0.74
FXR1-222	ENST00000498658	PLXNB3	Q9ULL4	1909 aa		10.42	□□□□□ -0.74
FXR1-222	ENST00000498658	AKAP13	Q12802	2813 aa		10.41	□□□□□ -0.74
FXR1-222	ENST00000498658	GLYATL1P3	A0A0U1RQE8	302 aa		10.41	□□□□□ -0.74

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