RNA–Protein interactions for RNA: ENST00000498514.5

SGMS1-205, Transcript of sphingomyelin synthase 1, humanhuman

TSL 3

Gene SGMS1, Length 397 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGMS1-205ENST00000498514 CHODLQ9H9P2 273 aa1.86□□□□□ -2.11
SGMS1-205ENST00000498514 ARFGAP3Q9NP61 516 aa1.86□□□□□ -2.11
SGMS1-205ENST00000498514 SIX2Q9NPC8 291 aa1.86□□□□□ -2.11
SGMS1-205ENST00000498514 HINT3Q9NQE9 182 aaKnown RBP1.86□□□□□ -2.11
SGMS1-205ENST00000498514 TCP11L1Q9NUJ3 509 aa1.86□□□□□ -2.11
SGMS1-205ENST00000498514 BEX4Q9NWD9 120 aaPredicted RBP1.86□□□□□ -2.11
SGMS1-205ENST00000498514 DACT1Q9NYF0 836 aa1.86□□□□□ -2.11
SGMS1-205ENST00000498514 RARRES3Q9UL19 164 aa1.86□□□□□ -2.11
SGMS1-205ENST00000498514 C1orf226A1L170 272 aa1.85□□□□□ -2.11
SGMS1-205ENST00000498514 PER2O15055 1255 aa1.85□□□□□ -2.11
SGMS1-205ENST00000498514 ANP32CO43423 234 aa1.85□□□□□ -2.11
SGMS1-205ENST00000498514 PDE9AO76083 593 aa1.85□□□□□ -2.11
SGMS1-205ENST00000498514 HMBSP08397 361 aa1.85□□□□□ -2.11
SGMS1-205ENST00000498514 CEBPBP17676 345 aa1.85□□□□□ -2.11
SGMS1-205ENST00000498514 ITGA3P26006 1051 aa1.85□□□□□ -2.11
SGMS1-205ENST00000498514 PDIA3P30101 505 aaKnown RBP1.85□□□□□ -2.11
SGMS1-205ENST00000498514 FASLGP48023 281 aa1.85□□□□□ -2.11
SGMS1-205ENST00000498514 CSNK2A1P68400 391 aaPredicted RBP1.85□□□□□ -2.11
SGMS1-205ENST00000498514 COX10Q12887 443 aa1.85□□□□□ -2.11
SGMS1-205ENST00000498514 GRIK3Q13003 919 aa1.85□□□□□ -2.11
SGMS1-205ENST00000498514 VEPH1Q14D04 833 aa1.85□□□□□ -2.11
SGMS1-205ENST00000498514 KRTAP11-1Q8IUC1 163 aa1.85□□□□□ -2.11
SGMS1-205ENST00000498514 MAP7D3Q8IWC1 876 aa1.85□□□□□ -2.11
SGMS1-205ENST00000498514 SLC39A11Q8N1S5 342 aa1.85□□□□□ -2.11
SGMS1-205ENST00000498514 ZBTB2Q8N680 514 aa1.85□□□□□ -2.11
SGMS1-205ENST00000498514 CSNK2A3Q8NEV1 391 aa1.85□□□□□ -2.11
SGMS1-205ENST00000498514 THAP6Q8TBB0 222 aa1.85□□□□□ -2.11
SGMS1-205ENST00000498514 ORAI1Q96D31 301 aa1.85□□□□□ -2.11
SGMS1-205ENST00000498514 OMA1Q96E52 524 aa1.85□□□□□ -2.11
SGMS1-205ENST00000498514 TNIP3Q96KP6 325 aa1.85□□□□□ -2.11
SGMS1-205ENST00000498514 BBS4Q96RK4 519 aa1.85□□□□□ -2.11
SGMS1-205ENST00000498514 BPIFA1Q9NP55 256 aa1.85□□□□□ -2.11
SGMS1-205ENST00000498514 CTNNAL1Q9UBT7 734 aa1.85□□□□□ -2.11
SGMS1-205ENST00000498514 CELA1Q9UNI1 258 aa1.85□□□□□ -2.11
SGMS1-205ENST00000498514 DDX52Q9Y2R4 599 aaKnown RBP eCLIP1.85□□□□□ -2.11
SGMS1-205ENST00000498514 MAGEB17A8MXT2 336 aa1.84□□□□□ -2.11
SGMS1-205ENST00000498514 STX16-NPEPL1H3BU86 382 aa1.84□□□□□ -2.11
SGMS1-205ENST00000498514 PLOD2O00469 737 aa1.84□□□□□ -2.11
SGMS1-205ENST00000498514 ACKR2O00590 384 aa1.84□□□□□ -2.11
SGMS1-205ENST00000498514 STX16O14662 325 aa1.84□□□□□ -2.11
SGMS1-205ENST00000498514 SLC22A2O15244 555 aa1.84□□□□□ -2.11
SGMS1-205ENST00000498514 SPINT2O43291 252 aa1.84□□□□□ -2.11
SGMS1-205ENST00000498514 MT-CYBP00156 380 aaPredicted RBP1.84□□□□□ -2.11
SGMS1-205ENST00000498514 CAPN2P17655 700 aa1.84□□□□□ -2.11
SGMS1-205ENST00000498514 EDN2P20800 178 aa1.84□□□□□ -2.11
SGMS1-205ENST00000498514 CST5P28325 142 aaPredicted RBP1.84□□□□□ -2.11
SGMS1-205ENST00000498514 PGFP49763 221 aa1.84□□□□□ -2.11
SGMS1-205ENST00000498514 MS4A2Q01362 244 aa1.84□□□□□ -2.11
SGMS1-205ENST00000498514 FASTKD1Q53R41 847 aaKnown RBP1.84□□□□□ -2.11
SGMS1-205ENST00000498514 FRG2Q64ET8 278 aa1.84□□□□□ -2.11
SGMS1-205ENST00000498514 TANGO2Q6ICL3 276 aa1.84□□□□□ -2.11
SGMS1-205ENST00000498514 FBXO46Q6PJ61 603 aaPredicted RBP1.84□□□□□ -2.11
SGMS1-205ENST00000498514 CPLX2Q6PUV4 134 aaKnown RBP1.84□□□□□ -2.11
SGMS1-205ENST00000498514 RAPH1Q70E73 1250 aa1.84□□□□□ -2.11
SGMS1-205ENST00000498514 GPAT4Q86UL3 456 aa1.84□□□□□ -2.11
SGMS1-205ENST00000498514 GPR180Q86V85 440 aa1.84□□□□□ -2.11
SGMS1-205ENST00000498514 Q8N377 158 aa1.84□□□□□ -2.11
SGMS1-205ENST00000498514 RBM15BQ8NDT2 890 aaKnown RBP1.84□□□□□ -2.11
SGMS1-205ENST00000498514 HMGCLL1Q8TB92 370 aa1.84□□□□□ -2.11
SGMS1-205ENST00000498514 SPPL3Q8TCT6 385 aa1.84□□□□□ -2.11
SGMS1-205ENST00000498514 ZSCAN31Q96LW9 406 aaPredicted RBP1.84□□□□□ -2.11
SGMS1-205ENST00000498514 RAB11FIP5Q9BXF6 653 aa1.84□□□□□ -2.11
SGMS1-205ENST00000498514 LRMDAQ9H2I8 198 aa1.84□□□□□ -2.11
SGMS1-205ENST00000498514 VEZTQ9HBM0 779 aa1.84□□□□□ -2.11
SGMS1-205ENST00000498514 CHST11Q9NPF2 352 aa1.84□□□□□ -2.11
SGMS1-205ENST00000498514 ZNF71Q9NQZ8 489 aaPredicted RBP1.84□□□□□ -2.11
SGMS1-205ENST00000498514 ABCB10Q9NRK6 738 aa1.84□□□□□ -2.11
SGMS1-205ENST00000498514 GPR83Q9NYM4 423 aa1.84□□□□□ -2.11
SGMS1-205ENST00000498514 KLHL20Q9Y2M5 609 aa1.84□□□□□ -2.11
SGMS1-205ENST00000498514 FAM96BQ9Y3D0 163 aa1.84□□□□□ -2.11
SGMS1-205ENST00000498514 LSM4Q9Y4Z0 139 aaKnown RBP1.84□□□□□ -2.11
SGMS1-205ENST00000498514 FLT1P17948 1338 aa1.84□□□□□ -2.12
SGMS1-205ENST00000498514 MUC19Q7Z5P9 8384 aa1.83□□□□□ -2.12
SGMS1-205ENST00000498514 A0A087WV62 115 aa1.83□□□□□ -2.12
SGMS1-205ENST00000498514 A0A087WW49 117 aa1.83□□□□□ -2.12
SGMS1-205ENST00000498514 TEX22C9J3V5 150 aa1.83□□□□□ -2.12
SGMS1-205ENST00000498514 H0YIN7 160 aa1.83□□□□□ -2.12
SGMS1-205ENST00000498514 NADKO95544 446 aaPredicted RBP1.83□□□□□ -2.12
SGMS1-205ENST00000498514 ELF1P32519 619 aa1.83□□□□□ -2.12
SGMS1-205ENST00000498514 SHMT1P34896 483 aa1.83□□□□□ -2.12
SGMS1-205ENST00000498514 PRKAA2P54646 552 aa1.83□□□□□ -2.12
SGMS1-205ENST00000498514 TAS2R38P59533 333 aa1.83□□□□□ -2.12
SGMS1-205ENST00000498514 MBTD1Q05BQ5 628 aa1.83□□□□□ -2.12
SGMS1-205ENST00000498514 GRAPQ13588 217 aa1.83□□□□□ -2.12
SGMS1-205ENST00000498514 TAF11Q15544 211 aa1.83□□□□□ -2.12
SGMS1-205ENST00000498514 GTDC1Q4AE62 458 aa1.83□□□□□ -2.12
SGMS1-205ENST00000498514 CTXN3Q4LDR2 81 aa1.83□□□□□ -2.12
SGMS1-205ENST00000498514 ALS2CLQ60I27 953 aa1.83□□□□□ -2.12
SGMS1-205ENST00000498514 ZNF280DQ6N043 979 aa1.83□□□□□ -2.12
SGMS1-205ENST00000498514 SRLQ86TD4 932 aa1.83□□□□□ -2.12
SGMS1-205ENST00000498514 FGFRL1Q8N441 504 aa1.83□□□□□ -2.12
SGMS1-205ENST00000498514 Q8N7P7 452 aa1.83□□□□□ -2.12
SGMS1-205ENST00000498514 ACVR1CQ8NER5 493 aa1.83□□□□□ -2.12
SGMS1-205ENST00000498514 RDM1Q8NG50 284 aa1.83□□□□□ -2.12
SGMS1-205ENST00000498514 HUS1BQ8NHY5 278 aa1.83□□□□□ -2.12
SGMS1-205ENST00000498514 RHBDF1Q96CC6 855 aa1.83□□□□□ -2.12
SGMS1-205ENST00000498514 PRAC1Q96KF2 57 aa1.83□□□□□ -2.12
SGMS1-205ENST00000498514 CD180Q99467 661 aa1.83□□□□□ -2.12
SGMS1-205ENST00000498514 EIF2AK1Q9BQI3 630 aaKnown RBP1.83□□□□□ -2.12
SGMS1-205ENST00000498514 LAT2Q9GZY6 243 aa1.83□□□□□ -2.12
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms