RNA–Protein interactions for RNA: ENST00000498438.1

HOXD11-202, Transcript of homeobox D11, humanhuman

TSL 1 (best)

Gene HOXD11, Length 1,259 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXD11-202ENST00000498438 RSPH14Q9UHP6 348 aa18.26■□□□□ 0.51
HOXD11-202ENST00000498438 TRHDEQ9UKU6 1024 aa18.26■□□□□ 0.51
HOXD11-202ENST00000498438 PACSIN2Q9UNF0 486 aaPredicted RBP18.26■□□□□ 0.51
HOXD11-202ENST00000498438 ENTPD2Q9Y5L3 495 aa18.26■□□□□ 0.51
HOXD11-202ENST00000498438 RNF215Q9Y6U7 377 aa18.26■□□□□ 0.51
HOXD11-202ENST00000498438 LOC285095A0A1B0GVY8 99 aa18.25■□□□□ 0.51
HOXD11-202ENST00000498438 D6RAR5 112 aa18.25■□□□□ 0.51
HOXD11-202ENST00000498438 AURKAO14965 403 aa18.25■□□□□ 0.51
HOXD11-202ENST00000498438 TLX3O43711 291 aaPredicted RBP18.25■□□□□ 0.51
HOXD11-202ENST00000498438 FGF1P05230 155 aa18.25■□□□□ 0.51
HOXD11-202ENST00000498438 GLB1P16278 677 aa18.25■□□□□ 0.51
HOXD11-202ENST00000498438 ACTR1BP42025 376 aa18.25■□□□□ 0.51
HOXD11-202ENST00000498438 TNNT3P45378 269 aaPredicted RBP18.25■□□□□ 0.51
HOXD11-202ENST00000498438 DCDC1P59894 354 aa18.25■□□□□ 0.51
HOXD11-202ENST00000498438 EIF3EP60228 445 aaKnown RBP18.25■□□□□ 0.51
HOXD11-202ENST00000498438 ACTR1AP61163 376 aa18.25■□□□□ 0.51
HOXD11-202ENST00000498438 CCL7P80098 99 aa18.25■□□□□ 0.51
HOXD11-202ENST00000498438 MPP3Q13368 585 aa18.25■□□□□ 0.51
HOXD11-202ENST00000498438 SIRPB2Q5JXA9 342 aa18.25■□□□□ 0.51
HOXD11-202ENST00000498438 ZNF569Q5MCW4 686 aa18.25■□□□□ 0.51
HOXD11-202ENST00000498438 CCNJLQ8IV13 435 aa18.25■□□□□ 0.51
HOXD11-202ENST00000498438 CDKL3Q8IVW4 592 aaPredicted RBP18.25■□□□□ 0.51
HOXD11-202ENST00000498438 SLC25A41Q8N5S1 370 aa18.25■□□□□ 0.51
HOXD11-202ENST00000498438 UBL4BQ8N7F7 174 aa18.25■□□□□ 0.51
HOXD11-202ENST00000498438 Q8N9G6 341 aaPredicted RBP18.25■□□□□ 0.51
HOXD11-202ENST00000498438 IPMKQ8NFU5 416 aa18.25■□□□□ 0.51
HOXD11-202ENST00000498438 GFM1Q96RP9 751 aaKnown RBP18.25■□□□□ 0.51
HOXD11-202ENST00000498438 GBA3Q9H227 469 aa18.25■□□□□ 0.51
HOXD11-202ENST00000498438 RAD18Q9NS91 495 aa18.25■□□□□ 0.51
HOXD11-202ENST00000498438 LRIT1Q9P2V4 623 aa18.25■□□□□ 0.51
HOXD11-202ENST00000498438 NFKBIL1Q9UBC1 381 aaPredicted RBP18.25■□□□□ 0.51
HOXD11-202ENST00000498438 APPL1Q9UKG1 709 aa18.25■□□□□ 0.51
HOXD11-202ENST00000498438 PCYT1BQ9Y5K3 369 aaPredicted RBP18.25■□□□□ 0.51
HOXD11-202ENST00000498438 ITPR1Q14643 2758 aa18.24■□□□□ 0.51
HOXD11-202ENST00000498438 A0A1W2PQM1 296 aa18.24■□□□□ 0.51
HOXD11-202ENST00000498438 MIF4GDA9UHW6 222 aaKnown RBP18.24■□□□□ 0.51
HOXD11-202ENST00000498438 NUDT21O43809 227 aaKnown RBP18.24■□□□□ 0.51
HOXD11-202ENST00000498438 DNAJC6O75061 913 aa18.24■□□□□ 0.51
HOXD11-202ENST00000498438 TJP3O95049 919 aa18.24■□□□□ 0.51
HOXD11-202ENST00000498438 RBP3P10745 1247 aa18.24■□□□□ 0.51
HOXD11-202ENST00000498438 PNLIPP16233 465 aa18.24■□□□□ 0.51
HOXD11-202ENST00000498438 BPIP17213 487 aa18.24■□□□□ 0.51
HOXD11-202ENST00000498438 CHRNA4P43681 627 aa18.24■□□□□ 0.51
HOXD11-202ENST00000498438 LRP8Q14114 963 aa18.24■□□□□ 0.51
HOXD11-202ENST00000498438 C3orf38Q5JPI3 329 aa18.24■□□□□ 0.51
HOXD11-202ENST00000498438 SPRED1Q7Z699 444 aa18.24■□□□□ 0.51
HOXD11-202ENST00000498438 C17orf82Q86X59 251 aaPredicted RBP18.24■□□□□ 0.51
HOXD11-202ENST00000498438 PATE1Q8WXA2 126 aa18.24■□□□□ 0.51
HOXD11-202ENST00000498438 GRAMD1AQ96CP6 724 aa18.24■□□□□ 0.51
HOXD11-202ENST00000498438 DCBLD2Q96PD2 775 aa18.24■□□□□ 0.51
HOXD11-202ENST00000498438 SRPK1Q96SB4 655 aaKnown RBP18.24■□□□□ 0.51
HOXD11-202ENST00000498438 FERMT1Q9BQL6 677 aa18.24■□□□□ 0.51
HOXD11-202ENST00000498438 GORASP1Q9BQQ3 440 aa18.24■□□□□ 0.51
HOXD11-202ENST00000498438 ZSCAN5AQ9BUG6 496 aa18.24■□□□□ 0.51
HOXD11-202ENST00000498438 LRRN3Q9H3W5 708 aa18.24■□□□□ 0.51
HOXD11-202ENST00000498438 POLR1BQ9H9Y6 1135 aa18.24■□□□□ 0.51
HOXD11-202ENST00000498438 ARFGAP3Q9NP61 516 aa18.24■□□□□ 0.51
HOXD11-202ENST00000498438 ZNHIT2Q9UHR6 403 aa18.24■□□□□ 0.51
HOXD11-202ENST00000498438 SATB2Q9UPW6 733 aa18.24■□□□□ 0.51
HOXD11-202ENST00000498438 PRKAB1Q9Y478 270 aa18.24■□□□□ 0.51
HOXD11-202ENST00000498438 CAPN6Q9Y6Q1 641 aa18.24■□□□□ 0.51
HOXD11-202ENST00000498438 ADAMTS20P59510 1910 aa18.23■□□□□ 0.51
HOXD11-202ENST00000498438 A0A1W2PNU3 283 aaPredicted RBP18.23■□□□□ 0.51
HOXD11-202ENST00000498438 DDX3YO15523 660 aaKnown RBP18.23■□□□□ 0.51
HOXD11-202ENST00000498438 ECEL1O95672 775 aa18.23■□□□□ 0.51
HOXD11-202ENST00000498438 EPOP01588 193 aa18.23■□□□□ 0.51
HOXD11-202ENST00000498438 ACTN2P35609 894 aa18.23■□□□□ 0.51
HOXD11-202ENST00000498438 LSSP48449 732 aa18.23■□□□□ 0.51
HOXD11-202ENST00000498438 GSDMDP57764 484 aa18.23■□□□□ 0.51
HOXD11-202ENST00000498438 PEX6Q13608 980 aa18.23■□□□□ 0.51
HOXD11-202ENST00000498438 SLC1A5Q15758 541 aa18.23■□□□□ 0.51
HOXD11-202ENST00000498438 TBC1D25Q3MII6 688 aa18.23■□□□□ 0.51
HOXD11-202ENST00000498438 ITPRIPL1Q6GPH6 555 aa18.23■□□□□ 0.51
HOXD11-202ENST00000498438 DARS2Q6PI48 645 aaKnown RBP18.23■□□□□ 0.51
HOXD11-202ENST00000498438 C19orf48Q6RUI8 117 aa18.23■□□□□ 0.51
HOXD11-202ENST00000498438 B3GNT8Q7Z7M8 397 aa18.23■□□□□ 0.51
HOXD11-202ENST00000498438 NAGSQ8N159 534 aa18.23■□□□□ 0.51
HOXD11-202ENST00000498438 TRAM1L1Q8N609 369 aa18.23■□□□□ 0.51
HOXD11-202ENST00000498438 FSD1LQ9BXM9 530 aa18.23■□□□□ 0.51
HOXD11-202ENST00000498438 BPIFA1Q9NP55 256 aa18.23■□□□□ 0.51
HOXD11-202ENST00000498438 KCNN4O15554 427 aa18.22■□□□□ 0.51
HOXD11-202ENST00000498438 PTMAP06454 111 aaKnown RBP18.22■□□□□ 0.51
HOXD11-202ENST00000498438 HLA-DPA1P20036 260 aa18.22■□□□□ 0.51
HOXD11-202ENST00000498438 GEMP55040 296 aa18.22■□□□□ 0.51
HOXD11-202ENST00000498438 ANKRD20A2Q5SQ80 823 aa18.22■□□□□ 0.51
HOXD11-202ENST00000498438 ZNF648Q5T619 568 aaPredicted RBP18.22■□□□□ 0.51
HOXD11-202ENST00000498438 ANKRD20A1Q5TYW2 823 aa18.22■□□□□ 0.51
HOXD11-202ENST00000498438 ANKRD20A3Q5VUR7 823 aa18.22■□□□□ 0.51
HOXD11-202ENST00000498438 PDPK2PQ6A1A2 396 aa18.22■□□□□ 0.51
HOXD11-202ENST00000498438 ARL14Q8N4G2 192 aa18.22■□□□□ 0.51
HOXD11-202ENST00000498438 TTC30BQ8N4P2 665 aa18.22■□□□□ 0.51
HOXD11-202ENST00000498438 SNIP1Q8TAD8 396 aaKnown RBP18.22■□□□□ 0.51
HOXD11-202ENST00000498438 BLOC1S5Q8TDH9 187 aa18.22■□□□□ 0.51
HOXD11-202ENST00000498438 HNRNPLLQ8WVV9 542 aaKnown RBP18.22■□□□□ 0.51
HOXD11-202ENST00000498438 FICDQ9BVA6 458 aa18.22■□□□□ 0.51
HOXD11-202ENST00000498438 FOXP3Q9BZS1 431 aa18.22■□□□□ 0.51
HOXD11-202ENST00000498438 OR2AG1Q9H205 316 aa18.22■□□□□ 0.51
HOXD11-202ENST00000498438 TRABDQ9H4I3 376 aa18.22■□□□□ 0.51
HOXD11-202ENST00000498438 ATXN10Q9UBB4 475 aa18.22■□□□□ 0.51
HOXD11-202ENST00000498438 ATXN7L1Q9ULK2 861 aaPredicted RBP18.22■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms