RNA–Protein interactions for RNA: ENST00000497978.1

NUDCD3-211, Transcript of NudC domain containing 3, humanhuman

TSL 4

Gene NUDCD3, Length 659 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUDCD3-211ENST00000497978 VPS18Q9P253 973 aa11.68□□□□□ -0.54
NUDCD3-211ENST00000497978 PLEKHM1Q9Y4G2 1056 aa11.68□□□□□ -0.54
NUDCD3-211ENST00000497978 ST14Q9Y5Y6 855 aa11.68□□□□□ -0.54
NUDCD3-211ENST00000497978 IGHV1OR21-1A0A087WYE8 117 aa11.67□□□□□ -0.54
NUDCD3-211ENST00000497978 SSU72P8A0A1W2PR75 194 aa11.67□□□□□ -0.54
NUDCD3-211ENST00000497978 LRRD1A4D1F6 860 aa11.67□□□□□ -0.54
NUDCD3-211ENST00000497978 RGSL1A5PLK6 1076 aa11.67□□□□□ -0.54
NUDCD3-211ENST00000497978 ANKRD66B4E2M5 251 aa11.67□□□□□ -0.54
NUDCD3-211ENST00000497978 EFSO43281 561 aa11.67□□□□□ -0.54
NUDCD3-211ENST00000497978 TMEM253P0C7T8 217 aa11.67□□□□□ -0.54
NUDCD3-211ENST00000497978 SLC2A4P14672 509 aa11.67□□□□□ -0.54
NUDCD3-211ENST00000497978 CSTF2P33240 577 aaKnown RBP eCLIP11.67□□□□□ -0.54
NUDCD3-211ENST00000497978 CD86P42081 329 aa11.67□□□□□ -0.54
NUDCD3-211ENST00000497978 ARHGAP25P42331 645 aa11.67□□□□□ -0.54
NUDCD3-211ENST00000497978 FASLGP48023 281 aa11.67□□□□□ -0.54
NUDCD3-211ENST00000497978 SPINT3P49223 89 aa11.67□□□□□ -0.54
NUDCD3-211ENST00000497978 LIMK2P53671 638 aa11.67□□□□□ -0.54
NUDCD3-211ENST00000497978 EMP3P54852 163 aa11.67□□□□□ -0.54
NUDCD3-211ENST00000497978 GPLD1P80108 840 aa11.67□□□□□ -0.54
NUDCD3-211ENST00000497978 PPIDQ08752 370 aaKnown RBP11.67□□□□□ -0.54
NUDCD3-211ENST00000497978 SLC10A2Q12908 348 aaPredicted RBP11.67□□□□□ -0.54
NUDCD3-211ENST00000497978 SQSTM1Q13501 440 aa11.67□□□□□ -0.54
NUDCD3-211ENST00000497978 IHHQ14623 411 aa11.67□□□□□ -0.54
NUDCD3-211ENST00000497978 QPCTQ16769 361 aa11.67□□□□□ -0.54
NUDCD3-211ENST00000497978 ODF2Q5BJF6 829 aa11.67□□□□□ -0.54
NUDCD3-211ENST00000497978 NKAIN2Q5VXU1 208 aa11.67□□□□□ -0.54
NUDCD3-211ENST00000497978 ZNF574Q6ZN55 896 aaPredicted RBP11.67□□□□□ -0.54
NUDCD3-211ENST00000497978 ZFAND4Q86XD8 727 aa11.67□□□□□ -0.54
NUDCD3-211ENST00000497978 AGBL5Q8NDL9 886 aa11.67□□□□□ -0.54
NUDCD3-211ENST00000497978 RCBTB1Q8NDN9 531 aa11.67□□□□□ -0.54
NUDCD3-211ENST00000497978 OR10G6Q8NH81 332 aa11.67□□□□□ -0.54
NUDCD3-211ENST00000497978 LRRN4Q8WUT4 740 aa11.67□□□□□ -0.54
NUDCD3-211ENST00000497978 RAPGEF5Q92565 580 aa11.67□□□□□ -0.54
NUDCD3-211ENST00000497978 TAAR9Q96RI9 348 aa11.67□□□□□ -0.54
NUDCD3-211ENST00000497978 AGAP2Q99490 1192 aa11.67□□□□□ -0.54
NUDCD3-211ENST00000497978 DNAJC7Q99615 494 aa11.67□□□□□ -0.54
NUDCD3-211ENST00000497978 SLC38A3Q99624 504 aa11.67□□□□□ -0.54
NUDCD3-211ENST00000497978 FAM83DQ9H4H8 585 aa11.67□□□□□ -0.54
NUDCD3-211ENST00000497978 RMI1Q9H9A7 625 aa11.67□□□□□ -0.54
NUDCD3-211ENST00000497978 DTLQ9NZJ0 730 aa11.67□□□□□ -0.54
NUDCD3-211ENST00000497978 FOXJ2Q9P0K8 574 aa11.67□□□□□ -0.54
NUDCD3-211ENST00000497978 HEY1Q9Y5J3 304 aa11.67□□□□□ -0.54
NUDCD3-211ENST00000497978 TRBV23OR9-2A0A075B6M9 112 aa11.66□□□□□ -0.54
NUDCD3-211ENST00000497978 ZNF487B1APH4 448 aa11.66□□□□□ -0.54
NUDCD3-211ENST00000497978 C9orf172C9J069 976 aa11.66□□□□□ -0.54
NUDCD3-211ENST00000497978 STMND1H3BQB6 276 aa11.66□□□□□ -0.54
NUDCD3-211ENST00000497978 KCNK1O00180 336 aa11.66□□□□□ -0.54
NUDCD3-211ENST00000497978 APOL1O14791 398 aa11.66□□□□□ -0.54
NUDCD3-211ENST00000497978 PPP1R12AO14974 1030 aaPredicted RBP11.66□□□□□ -0.54
NUDCD3-211ENST00000497978 DUX1O43812 170 aa11.66□□□□□ -0.54
NUDCD3-211ENST00000497978 DNAJC6O75061 913 aa11.66□□□□□ -0.54
NUDCD3-211ENST00000497978 ATP1A1P05023 1023 aaKnown RBP11.66□□□□□ -0.54
NUDCD3-211ENST00000497978 CCL4P13236 92 aa11.66□□□□□ -0.54
NUDCD3-211ENST00000497978 ZFXP17010 805 aaPredicted RBP11.66□□□□□ -0.54
NUDCD3-211ENST00000497978 ATP1A2P50993 1020 aa11.66□□□□□ -0.54
NUDCD3-211ENST00000497978 IFI35P80217 286 aaPredicted RBP11.66□□□□□ -0.54
NUDCD3-211ENST00000497978 AP1B1Q10567 949 aa11.66□□□□□ -0.54
NUDCD3-211ENST00000497978 PDK1Q15118 436 aa11.66□□□□□ -0.54
NUDCD3-211ENST00000497978 TMEM71Q6P5X7 295 aa11.66□□□□□ -0.54
NUDCD3-211ENST00000497978 XKR5Q6UX68 686 aa11.66□□□□□ -0.54
NUDCD3-211ENST00000497978 CHST15Q7LFX5 561 aaPredicted RBP11.66□□□□□ -0.54
NUDCD3-211ENST00000497978 VSIG1Q86XK7 387 aa11.66□□□□□ -0.54
NUDCD3-211ENST00000497978 SFRP1Q8N474 314 aa11.66□□□□□ -0.54
NUDCD3-211ENST00000497978 SLC35G2Q8TBE7 412 aa11.66□□□□□ -0.54
NUDCD3-211ENST00000497978 SLC37A2Q8TED4 501 aa11.66□□□□□ -0.54
NUDCD3-211ENST00000497978 SH3KBP1Q96B97 665 aa11.66□□□□□ -0.54
NUDCD3-211ENST00000497978 CCDC42Q96M95 316 aa11.66□□□□□ -0.54
NUDCD3-211ENST00000497978 ARHGAP9Q9BRR9 750 aa11.66□□□□□ -0.54
NUDCD3-211ENST00000497978 SEMA4CQ9C0C4 833 aa11.66□□□□□ -0.54
NUDCD3-211ENST00000497978 RAD18Q9NS91 495 aa11.66□□□□□ -0.54
NUDCD3-211ENST00000497978 ZFC3H1O60293 1989 aaKnown RBP11.65□□□□□ -0.54
NUDCD3-211ENST00000497978 AHCTF1Q8WYP5 2266 aa11.65□□□□□ -0.54
NUDCD3-211ENST00000497978 B8ZZF3 427 aa11.65□□□□□ -0.54
NUDCD3-211ENST00000497978 IQCJ-SCHIP1C9J366 451 aaPredicted RBP11.65□□□□□ -0.54
NUDCD3-211ENST00000497978 J3QKU1 62 aa11.65□□□□□ -0.54
NUDCD3-211ENST00000497978 ITGB2P05107 769 aa11.65□□□□□ -0.54
NUDCD3-211ENST00000497978 MMP2P08253 660 aa11.65□□□□□ -0.54
NUDCD3-211ENST00000497978 THRAP10827 490 aa11.65□□□□□ -0.54
NUDCD3-211ENST00000497978 FGF3P11487 239 aaPredicted RBP11.65□□□□□ -0.54
NUDCD3-211ENST00000497978 HHEXQ03014 270 aa11.65□□□□□ -0.54
NUDCD3-211ENST00000497978 ASTE1Q2TB18 679 aaPredicted RBP11.65□□□□□ -0.54
NUDCD3-211ENST00000497978 HENMT1Q5T8I9 393 aaKnown RBP11.65□□□□□ -0.54
NUDCD3-211ENST00000497978 CCDC70Q6NSX1 233 aa11.65□□□□□ -0.54
NUDCD3-211ENST00000497978 LYSMD3Q7Z3D4 306 aa11.65□□□□□ -0.54
NUDCD3-211ENST00000497978 SLC9B2Q86UD5 537 aa11.65□□□□□ -0.54
NUDCD3-211ENST00000497978 NT5DC3Q86UY8 548 aa11.65□□□□□ -0.54
NUDCD3-211ENST00000497978 VASH2Q86V25 355 aa11.65□□□□□ -0.54
NUDCD3-211ENST00000497978 DTX1Q86Y01 620 aa11.65□□□□□ -0.54
NUDCD3-211ENST00000497978 RHOT2Q8IXI1 618 aa11.65□□□□□ -0.54
NUDCD3-211ENST00000497978 PLD5Q8N7P1 536 aa11.65□□□□□ -0.54
NUDCD3-211ENST00000497978 AVL9Q8NBF6 648 aa11.65□□□□□ -0.54
NUDCD3-211ENST00000497978 MARVELD3Q96A59 401 aa11.65□□□□□ -0.54
NUDCD3-211ENST00000497978 HERPUD2Q9BSE4 406 aa11.65□□□□□ -0.54
NUDCD3-211ENST00000497978 DDA1Q9BW61 102 aa11.65□□□□□ -0.54
NUDCD3-211ENST00000497978 SPATA16Q9BXB7 569 aa11.65□□□□□ -0.54
NUDCD3-211ENST00000497978 ASPSCR1Q9BZE9 553 aa11.65□□□□□ -0.54
NUDCD3-211ENST00000497978 BRD8Q9H0E9 1235 aa11.65□□□□□ -0.54
NUDCD3-211ENST00000497978 ZFYVE1Q9HBF4 777 aa11.65□□□□□ -0.54
NUDCD3-211ENST00000497978 SARS2Q9NP81 518 aaKnown RBP11.65□□□□□ -0.54
NUDCD3-211ENST00000497978 SLC39A1Q9NY26 324 aa11.65□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms