RNA–Protein interactions for RNA: ENST00000496569.1

HDLBP-246, Transcript of high density lipoprotein binding protein, humanhuman

TSL 4

Gene HDLBP, Length 374 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDLBP-246ENST00000496569 MTX2O75431 263 aa12.12□□□□□ -0.47
HDLBP-246ENST00000496569 ECEL1O95672 775 aa12.12□□□□□ -0.47
HDLBP-246ENST00000496569 NDST3O95803 873 aa12.12□□□□□ -0.47
HDLBP-246ENST00000496569 PYGMP11217 842 aa12.12□□□□□ -0.47
HDLBP-246ENST00000496569 HGFP14210 728 aa12.12□□□□□ -0.47
HDLBP-246ENST00000496569 HOXB3P14651 431 aaPredicted RBP12.12□□□□□ -0.47
HDLBP-246ENST00000496569 CA5AP35218 305 aa12.12□□□□□ -0.47
HDLBP-246ENST00000496569 NR2C2P49116 596 aa12.12□□□□□ -0.47
HDLBP-246ENST00000496569 OR1D5P58170 312 aa12.12□□□□□ -0.47
HDLBP-246ENST00000496569 CCDC173Q0VFZ6 552 aa12.12□□□□□ -0.47
HDLBP-246ENST00000496569 ILF3Q12906 894 aaKnown RBP eCLIP12.12□□□□□ -0.47
HDLBP-246ENST00000496569 PTPRCAPQ14761 206 aa12.12□□□□□ -0.47
HDLBP-246ENST00000496569 PLA2G4EQ3MJ16 856 aa12.12□□□□□ -0.47
HDLBP-246ENST00000496569 KHDC1Q4VXA5 237 aaKnown RBP12.12□□□□□ -0.47
HDLBP-246ENST00000496569 PYCR3Q53H96 274 aa12.12□□□□□ -0.47
HDLBP-246ENST00000496569 CCDC181Q5TID7 509 aa12.12□□□□□ -0.47
HDLBP-246ENST00000496569 PID1Q7Z2X4 250 aa12.12□□□□□ -0.47
HDLBP-246ENST00000496569 SPRED1Q7Z699 444 aa12.12□□□□□ -0.47
HDLBP-246ENST00000496569 NRSN1Q8IZ57 195 aa12.12□□□□□ -0.47
HDLBP-246ENST00000496569 NAGSQ8N159 534 aa12.12□□□□□ -0.47
HDLBP-246ENST00000496569 CACTIN-AS1Q8N1I8 211 aa12.12□□□□□ -0.47
HDLBP-246ENST00000496569 HTR3CQ8WXA8 447 aa12.12□□□□□ -0.47
HDLBP-246ENST00000496569 PRR11Q96HE9 360 aaPredicted RBP12.12□□□□□ -0.47
HDLBP-246ENST00000496569 MRGPRX2Q96LB1 330 aa12.12□□□□□ -0.47
HDLBP-246ENST00000496569 GFM1Q96RP9 751 aaKnown RBP12.12□□□□□ -0.47
HDLBP-246ENST00000496569 APOL2Q9BQE5 337 aa12.12□□□□□ -0.47
HDLBP-246ENST00000496569 SPATA16Q9BXB7 569 aa12.12□□□□□ -0.47
HDLBP-246ENST00000496569 ADGRE3Q9BY15 652 aa12.12□□□□□ -0.47
HDLBP-246ENST00000496569 GSDMCQ9BYG8 508 aa12.12□□□□□ -0.47
HDLBP-246ENST00000496569 OSBPL8Q9BZF1 889 aa12.12□□□□□ -0.47
HDLBP-246ENST00000496569 GPR63Q9BZJ6 419 aa12.12□□□□□ -0.47
HDLBP-246ENST00000496569 LRRN3Q9H3W5 708 aa12.12□□□□□ -0.47
HDLBP-246ENST00000496569 FAM83DQ9H4H8 585 aa12.12□□□□□ -0.47
HDLBP-246ENST00000496569 KCTD5Q9NXV2 234 aa12.12□□□□□ -0.47
HDLBP-246ENST00000496569 LRIT1Q9P2V4 623 aa12.12□□□□□ -0.47
HDLBP-246ENST00000496569 DNPEPQ9ULA0 475 aa12.12□□□□□ -0.47
HDLBP-246ENST00000496569 KCNK6Q9Y257 313 aa12.12□□□□□ -0.47
HDLBP-246ENST00000496569 SBDSQ9Y3A5 250 aaKnown RBP eCLIP12.12□□□□□ -0.47
HDLBP-246ENST00000496569 CAPN6Q9Y6Q1 641 aa12.12□□□□□ -0.47
HDLBP-246ENST00000496569 SDK2Q58EX2 2172 aa12.11□□□□□ -0.47
HDLBP-246ENST00000496569 TCRBV7S2A1N4TA0A589 114 aa12.11□□□□□ -0.47
HDLBP-246ENST00000496569 BTNL10A8MVZ5 291 aa12.11□□□□□ -0.47
HDLBP-246ENST00000496569 APOC4-APOC2K7ER74 178 aa12.11□□□□□ -0.47
HDLBP-246ENST00000496569 DDX3YO15523 660 aaKnown RBP12.11□□□□□ -0.47
HDLBP-246ENST00000496569 DNAJC6O75061 913 aa12.11□□□□□ -0.47
HDLBP-246ENST00000496569 APOC2P02655 101 aa12.11□□□□□ -0.47
HDLBP-246ENST00000496569 ACP5P13686 325 aa12.11□□□□□ -0.47
HDLBP-246ENST00000496569 BPIP17213 487 aa12.11□□□□□ -0.47
HDLBP-246ENST00000496569 CDC25BP30305 580 aa12.11□□□□□ -0.47
HDLBP-246ENST00000496569 EIF3EP60228 445 aaKnown RBP12.11□□□□□ -0.47
HDLBP-246ENST00000496569 TBC1D25Q3MII6 688 aa12.11□□□□□ -0.47
HDLBP-246ENST00000496569 AMZ1Q400G9 498 aa12.11□□□□□ -0.47
HDLBP-246ENST00000496569 SIRPB2Q5JXA9 342 aa12.11□□□□□ -0.47
HDLBP-246ENST00000496569 CRTC3Q6UUV7 619 aa12.11□□□□□ -0.47
HDLBP-246ENST00000496569 CHST15Q7LFX5 561 aaPredicted RBP12.11□□□□□ -0.47
HDLBP-246ENST00000496569 TMC3Q7Z5M5 1100 aa12.11□□□□□ -0.47
HDLBP-246ENST00000496569 GALNT13Q8IUC8 556 aa12.11□□□□□ -0.47
HDLBP-246ENST00000496569 ARL14Q8N4G2 192 aa12.11□□□□□ -0.47
HDLBP-246ENST00000496569 TTC30BQ8N4P2 665 aa12.11□□□□□ -0.47
HDLBP-246ENST00000496569 KIAA1524Q8TCG1 905 aa12.11□□□□□ -0.47
HDLBP-246ENST00000496569 CCHCR1Q8TD31 782 aa12.11□□□□□ -0.47
HDLBP-246ENST00000496569 SCARF2Q96GP6 870 aaPredicted RBP12.11□□□□□ -0.47
HDLBP-246ENST00000496569 FICDQ9BVA6 458 aa12.11□□□□□ -0.47
HDLBP-246ENST00000496569 CDH19Q9H159 772 aa12.11□□□□□ -0.47
HDLBP-246ENST00000496569 POLR1BQ9H9Y6 1135 aa12.11□□□□□ -0.47
HDLBP-246ENST00000496569 RDH14Q9HBH5 336 aa12.11□□□□□ -0.47
HDLBP-246ENST00000496569 ASCL3Q9NQ33 180 aa12.11□□□□□ -0.47
HDLBP-246ENST00000496569 TRNAU1APQ9NX07 287 aaKnown RBP12.11□□□□□ -0.47
HDLBP-246ENST00000496569 ATXN10Q9UBB4 475 aa12.11□□□□□ -0.47
HDLBP-246ENST00000496569 FAM153AQ9UHL3 310 aa12.11□□□□□ -0.47
HDLBP-246ENST00000496569 RSPH14Q9UHP6 348 aa12.11□□□□□ -0.47
HDLBP-246ENST00000496569 ZNHIT2Q9UHR6 403 aa12.11□□□□□ -0.47
HDLBP-246ENST00000496569 TMPRSS11EQ9UL52 423 aa12.11□□□□□ -0.47
HDLBP-246ENST00000496569 SMG1Q96Q15 3661 aaKnown RBP12.1□□□□□ -0.47
HDLBP-246ENST00000496569 PPM1DO15297 605 aa12.1□□□□□ -0.47
HDLBP-246ENST00000496569 B4GAT1O43505 415 aa12.1□□□□□ -0.47
HDLBP-246ENST00000496569 RBP3P10745 1247 aa12.1□□□□□ -0.47
HDLBP-246ENST00000496569 GLB1P16278 677 aa12.1□□□□□ -0.47
HDLBP-246ENST00000496569 ZNF8P17098 575 aaPredicted RBP12.1□□□□□ -0.47
HDLBP-246ENST00000496569 PSMB4P28070 264 aa12.1□□□□□ -0.47
HDLBP-246ENST00000496569 RWDD2BP57060 319 aa12.1□□□□□ -0.47
HDLBP-246ENST00000496569 ZNF569Q5MCW4 686 aa12.1□□□□□ -0.47
HDLBP-246ENST00000496569 NKAIN2Q5VXU1 208 aa12.1□□□□□ -0.47
HDLBP-246ENST00000496569 BZW1Q7L1Q6 419 aaKnown RBP12.1□□□□□ -0.47
HDLBP-246ENST00000496569 TAB3Q8N5C8 712 aaPredicted RBP12.1□□□□□ -0.47
HDLBP-246ENST00000496569 CCDC110Q8TBZ0 833 aa12.1□□□□□ -0.47
HDLBP-246ENST00000496569 BLOC1S5Q8TDH9 187 aa12.1□□□□□ -0.47
HDLBP-246ENST00000496569 SLC37A2Q8TED4 501 aa12.1□□□□□ -0.47
HDLBP-246ENST00000496569 NAT14Q8WUY8 206 aa12.1□□□□□ -0.47
HDLBP-246ENST00000496569 FCRL5Q96RD9 977 aa12.1□□□□□ -0.47
HDLBP-246ENST00000496569 NUDT22Q9BRQ3 303 aa12.1□□□□□ -0.47
HDLBP-246ENST00000496569 OR2AG1Q9H205 316 aa12.1□□□□□ -0.47
HDLBP-246ENST00000496569 MAGEE1Q9HCI5 957 aa12.1□□□□□ -0.47
HDLBP-246ENST00000496569 AMFRQ9UKV5 643 aa12.1□□□□□ -0.47
HDLBP-246ENST00000496569 R3HDM2Q9Y2K5 976 aaKnown RBP12.1□□□□□ -0.47
HDLBP-246ENST00000496569 A0A087WV48 116 aa12.09□□□□□ -0.47
HDLBP-246ENST00000496569 LOC285095A0A1B0GVY8 99 aa12.09□□□□□ -0.47
HDLBP-246ENST00000496569 CCDC66A2RUB6 948 aa12.09□□□□□ -0.47
HDLBP-246ENST00000496569 HACD1B0YJ81 288 aa12.09□□□□□ -0.47
HDLBP-246ENST00000496569 KCNN4O15554 427 aa12.09□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms