RNA–Protein interactions for RNA: ENST00000496332.5

THBS3-208, Transcript of thrombospondin 3, humanhuman

TSL 3

Gene THBS3, Length 839 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
THBS3-208ENST00000496332 CCDC187A0A096LP49 1063 aa11.74□□□□□ -0.53
THBS3-208ENST00000496332 LOC285095A0A1B0GVY8 99 aa11.74□□□□□ -0.53
THBS3-208ENST00000496332 CCDC66A2RUB6 948 aa11.74□□□□□ -0.53
THBS3-208ENST00000496332 PMS2P1A4D2B8 440 aa11.74□□□□□ -0.53
THBS3-208ENST00000496332 RHPN2P1A8MT19 583 aa11.74□□□□□ -0.53
THBS3-208ENST00000496332 F5H423 210 aaPredicted RBP11.74□□□□□ -0.53
THBS3-208ENST00000496332 TMX2-CTNND1H3BSU7 103 aa11.74□□□□□ -0.53
THBS3-208ENST00000496332 APOC4-APOC2K7ER74 178 aa11.74□□□□□ -0.53
THBS3-208ENST00000496332 PJA2O43164 708 aa11.74□□□□□ -0.53
THBS3-208ENST00000496332 APOC2P02655 101 aa11.74□□□□□ -0.53
THBS3-208ENST00000496332 CTNNA2P26232 953 aa11.74□□□□□ -0.53
THBS3-208ENST00000496332 INHBCP55103 352 aa11.74□□□□□ -0.53
THBS3-208ENST00000496332 WNT3AP56704 352 aa11.74□□□□□ -0.53
THBS3-208ENST00000496332 ERVPABLB-1P60509 514 aa11.74□□□□□ -0.53
THBS3-208ENST00000496332 B4GALNT1Q00973 533 aa11.74□□□□□ -0.53
THBS3-208ENST00000496332 CCDC173Q0VFZ6 552 aa11.74□□□□□ -0.53
THBS3-208ENST00000496332 XRCC4Q13426 336 aa11.74□□□□□ -0.53
THBS3-208ENST00000496332 CCDC181Q5TID7 509 aa11.74□□□□□ -0.53
THBS3-208ENST00000496332 IGF2-ASQ6U949 168 aa11.74□□□□□ -0.53
THBS3-208ENST00000496332 KDELC1Q6UW63 502 aa11.74□□□□□ -0.53
THBS3-208ENST00000496332 KIAA1328Q86T90 577 aa11.74□□□□□ -0.53
THBS3-208ENST00000496332 SPC24Q8NBT2 197 aa11.74□□□□□ -0.53
THBS3-208ENST00000496332 GPR26Q8NDV2 337 aa11.74□□□□□ -0.53
THBS3-208ENST00000496332 WDR36Q8NI36 951 aaKnown RBP11.74□□□□□ -0.53
THBS3-208ENST00000496332 PATE1Q8WXA2 126 aa11.74□□□□□ -0.53
THBS3-208ENST00000496332 CRELD1Q96HD1 420 aa11.74□□□□□ -0.53
THBS3-208ENST00000496332 PRR11Q96HE9 360 aaPredicted RBP11.74□□□□□ -0.53
THBS3-208ENST00000496332 SLC46A1Q96NT5 459 aa11.74□□□□□ -0.53
THBS3-208ENST00000496332 FCRL5Q96RD9 977 aa11.74□□□□□ -0.53
THBS3-208ENST00000496332 SRPK1Q96SB4 655 aaKnown RBP11.74□□□□□ -0.53
THBS3-208ENST00000496332 VAT1Q99536 393 aa11.74□□□□□ -0.53
THBS3-208ENST00000496332 HERPUD2Q9BSE4 406 aa11.74□□□□□ -0.53
THBS3-208ENST00000496332 SPATA16Q9BXB7 569 aa11.74□□□□□ -0.53
THBS3-208ENST00000496332 C10orf88Q9H8K7 445 aa11.74□□□□□ -0.53
THBS3-208ENST00000496332 EPB41L5Q9HCM4 733 aa11.74□□□□□ -0.53
THBS3-208ENST00000496332 THSD1Q9NS62 852 aa11.74□□□□□ -0.53
THBS3-208ENST00000496332 RAD18Q9NS91 495 aa11.74□□□□□ -0.53
THBS3-208ENST00000496332 PCDHGA8Q9Y5G5 932 aa11.74□□□□□ -0.53
THBS3-208ENST00000496332 PCYT1BQ9Y5K3 369 aaPredicted RBP11.74□□□□□ -0.53
THBS3-208ENST00000496332 COL27A1Q8IZC6 1860 aaPredicted RBP11.74□□□□□ -0.53
THBS3-208ENST00000496332 GRID2IPA4D2P6 1211 aa11.73□□□□□ -0.53
THBS3-208ENST00000496332 H7C0C1 242 aa11.73□□□□□ -0.53
THBS3-208ENST00000496332 AURKAO14965 403 aa11.73□□□□□ -0.53
THBS3-208ENST00000496332 B4GAT1O43505 415 aa11.73□□□□□ -0.53
THBS3-208ENST00000496332 DNAJC6O75061 913 aa11.73□□□□□ -0.53
THBS3-208ENST00000496332 TNFSF15O95150 251 aa11.73□□□□□ -0.53
THBS3-208ENST00000496332 BPIP17213 487 aa11.73□□□□□ -0.53
THBS3-208ENST00000496332 RBL1P28749 1068 aa11.73□□□□□ -0.53
THBS3-208ENST00000496332 ALDH4A1P30038 563 aa11.73□□□□□ -0.53
THBS3-208ENST00000496332 CDC25BP30305 580 aa11.73□□□□□ -0.53
THBS3-208ENST00000496332 ATP5OP48047 213 aa11.73□□□□□ -0.53
THBS3-208ENST00000496332 RP1P56715 2156 aa11.73□□□□□ -0.53
THBS3-208ENST00000496332 RWDD2BP57060 319 aa11.73□□□□□ -0.53
THBS3-208ENST00000496332 PCBP4P57723 403 aaKnown RBP11.73□□□□□ -0.53
THBS3-208ENST00000496332 OR1D5P58170 312 aa11.73□□□□□ -0.53
THBS3-208ENST00000496332 ADAMTS20P59510 1910 aa11.73□□□□□ -0.53
THBS3-208ENST00000496332 DCDC1P59894 354 aa11.73□□□□□ -0.53
THBS3-208ENST00000496332 BIRC2Q13490 618 aa11.73□□□□□ -0.53
THBS3-208ENST00000496332 LRP8Q14114 963 aa11.73□□□□□ -0.53
THBS3-208ENST00000496332 NOMO1Q15155 1222 aa11.73□□□□□ -0.53
THBS3-208ENST00000496332 SIRPB2Q5JXA9 342 aa11.73□□□□□ -0.53
THBS3-208ENST00000496332 ZNF569Q5MCW4 686 aa11.73□□□□□ -0.53
THBS3-208ENST00000496332 RAB11FIP2Q7L804 512 aa11.73□□□□□ -0.53
THBS3-208ENST00000496332 CHST15Q7LFX5 561 aaPredicted RBP11.73□□□□□ -0.53
THBS3-208ENST00000496332 ZNF438Q7Z4V0 828 aa11.73□□□□□ -0.53
THBS3-208ENST00000496332 TMEM139Q8IV31 216 aa11.73□□□□□ -0.53
THBS3-208ENST00000496332 NAGSQ8N159 534 aa11.73□□□□□ -0.53
THBS3-208ENST00000496332 SLC25A41Q8N5S1 370 aa11.73□□□□□ -0.53
THBS3-208ENST00000496332 TRAM1L1Q8N609 369 aa11.73□□□□□ -0.53
THBS3-208ENST00000496332 LRRC57Q8N9N7 239 aa11.73□□□□□ -0.53
THBS3-208ENST00000496332 ZNF248Q8NDW4 579 aa11.73□□□□□ -0.53
THBS3-208ENST00000496332 LIN37Q96GY3 246 aaPredicted RBP11.73□□□□□ -0.53
THBS3-208ENST00000496332 OXNAD1Q96HP4 312 aaPredicted RBP11.73□□□□□ -0.53
THBS3-208ENST00000496332 NAF1Q96HR8 494 aaKnown RBP11.73□□□□□ -0.53
THBS3-208ENST00000496332 TMEM74Q96NL1 305 aa11.73□□□□□ -0.53
THBS3-208ENST00000496332 ZSCAN5AQ9BUG6 496 aa11.73□□□□□ -0.53
THBS3-208ENST00000496332 OSBPL8Q9BZF1 889 aa11.73□□□□□ -0.53
THBS3-208ENST00000496332 STRADBQ9C0K7 418 aa11.73□□□□□ -0.53
THBS3-208ENST00000496332 RMI1Q9H9A7 625 aa11.73□□□□□ -0.53
THBS3-208ENST00000496332 ARFGAP3Q9NP61 516 aa11.73□□□□□ -0.53
THBS3-208ENST00000496332 IMPACTQ9P2X3 320 aa11.73□□□□□ -0.53
THBS3-208ENST00000496332 ATXN10Q9UBB4 475 aa11.73□□□□□ -0.53
THBS3-208ENST00000496332 RSPH14Q9UHP6 348 aa11.73□□□□□ -0.53
THBS3-208ENST00000496332 TRHDEQ9UKU6 1024 aa11.73□□□□□ -0.53
THBS3-208ENST00000496332 EFR3BQ9Y2G0 817 aa11.73□□□□□ -0.53
THBS3-208ENST00000496332 FAM208BQ5VWN6 2430 aa11.72□□□□□ -0.53
THBS3-208ENST00000496332 TRBV23OR9-2A0A075B6M9 112 aa11.72□□□□□ -0.53
THBS3-208ENST00000496332 MACROD2A1Z1Q3 448 aa11.72□□□□□ -0.53
THBS3-208ENST00000496332 PPM1DO15297 605 aa11.72□□□□□ -0.53
THBS3-208ENST00000496332 ZW10O43264 779 aa11.72□□□□□ -0.53
THBS3-208ENST00000496332 NUAK1O60285 661 aa11.72□□□□□ -0.53
THBS3-208ENST00000496332 SLC25A14O95258 325 aaPredicted RBP11.72□□□□□ -0.53
THBS3-208ENST00000496332 EPOP01588 193 aa11.72□□□□□ -0.53
THBS3-208ENST00000496332 PYGMP11217 842 aa11.72□□□□□ -0.53
THBS3-208ENST00000496332 CCKBRP32239 447 aa11.72□□□□□ -0.53
THBS3-208ENST00000496332 PTPN7P35236 360 aa11.72□□□□□ -0.53
THBS3-208ENST00000496332 CETN2P41208 172 aa11.72□□□□□ -0.53
THBS3-208ENST00000496332 CHRNA4P43681 627 aa11.72□□□□□ -0.53
THBS3-208ENST00000496332 TNNT3P45378 269 aaPredicted RBP11.72□□□□□ -0.53
THBS3-208ENST00000496332 OTUD4Q01804 1114 aaKnown RBP11.72□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 183.5 ms