RNA–Protein interactions for RNA: ENST00000496071.5

COMMD3-214, Transcript of COMM domain containing 3, humanhuman

TSL 5

Gene COMMD3, Length 1,150 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD3-214ENST00000496071 PPP1R2P1Q96PQ5 205 aa16.92■□□□□ 0.3
COMMD3-214ENST00000496071 FSD1LQ9BXM9 530 aa16.92■□□□□ 0.3
COMMD3-214ENST00000496071 GBA3Q9H227 469 aa16.92■□□□□ 0.3
COMMD3-214ENST00000496071 SPATS2LQ9NUQ6 558 aaKnown RBP16.92■□□□□ 0.3
COMMD3-214ENST00000496071 LRIT1Q9P2V4 623 aa16.92■□□□□ 0.3
COMMD3-214ENST00000496071 AAR2Q9Y312 384 aaKnown RBP16.92■□□□□ 0.3
COMMD3-214ENST00000496071 ADGRG1Q9Y653 693 aa16.92■□□□□ 0.3
COMMD3-214ENST00000496071 CACNA1BQ00975 2339 aa16.92■□□□□ 0.3
COMMD3-214ENST00000496071 A0A0U1RQJ8 604 aa16.91■□□□□ 0.3
COMMD3-214ENST00000496071 NTN3O00634 580 aaPredicted RBP16.91■□□□□ 0.3
COMMD3-214ENST00000496071 DDX3YO15523 660 aaKnown RBP16.91■□□□□ 0.3
COMMD3-214ENST00000496071 KCNN4O15554 427 aa16.91■□□□□ 0.3
COMMD3-214ENST00000496071 ZW10O43264 779 aa16.91■□□□□ 0.3
COMMD3-214ENST00000496071 FTCDO95954 541 aa16.91■□□□□ 0.3
COMMD3-214ENST00000496071 ATP1A1P05023 1023 aaKnown RBP16.91■□□□□ 0.3
COMMD3-214ENST00000496071 FGF1P05230 155 aa16.91■□□□□ 0.3
COMMD3-214ENST00000496071 AK4P27144 223 aaPredicted RBP16.91■□□□□ 0.3
COMMD3-214ENST00000496071 PRPSAP1Q14558 356 aa16.91■□□□□ 0.3
COMMD3-214ENST00000496071 SLC1A5Q15758 541 aa16.91■□□□□ 0.3
COMMD3-214ENST00000496071 SIRPB2Q5JXA9 342 aa16.91■□□□□ 0.3
COMMD3-214ENST00000496071 ZNF569Q5MCW4 686 aa16.91■□□□□ 0.3
COMMD3-214ENST00000496071 ANKRD20A2Q5SQ80 823 aa16.91■□□□□ 0.3
COMMD3-214ENST00000496071 ANKRD20A1Q5TYW2 823 aa16.91■□□□□ 0.3
COMMD3-214ENST00000496071 ANKRD20A3Q5VUR7 823 aa16.91■□□□□ 0.3
COMMD3-214ENST00000496071 ZDHHC20Q5W0Z9 365 aa16.91■□□□□ 0.3
COMMD3-214ENST00000496071 AADACL2Q6P093 401 aa16.91■□□□□ 0.3
COMMD3-214ENST00000496071 SLC30A9Q6PML9 568 aa16.91■□□□□ 0.3
COMMD3-214ENST00000496071 MARK2Q7KZI7 788 aaKnown RBP16.91■□□□□ 0.3
COMMD3-214ENST00000496071 C17orf82Q86X59 251 aaPredicted RBP16.91■□□□□ 0.3
COMMD3-214ENST00000496071 IPMKQ8NFU5 416 aa16.91■□□□□ 0.3
COMMD3-214ENST00000496071 PLEKHG4BQ96PX9 1271 aa16.91■□□□□ 0.3
COMMD3-214ENST00000496071 GFM1Q96RP9 751 aaKnown RBP16.91■□□□□ 0.3
COMMD3-214ENST00000496071 CARD9Q9H257 536 aa16.91■□□□□ 0.3
COMMD3-214ENST00000496071 C10orf88Q9H8K7 445 aa16.91■□□□□ 0.3
COMMD3-214ENST00000496071 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP16.91■□□□□ 0.3
COMMD3-214ENST00000496071 ZNHIT2Q9UHR6 403 aa16.91■□□□□ 0.3
COMMD3-214ENST00000496071 PACSIN2Q9UNF0 486 aaPredicted RBP16.91■□□□□ 0.3
COMMD3-214ENST00000496071 PCDHB1Q9Y5F3 818 aa16.91■□□□□ 0.3
COMMD3-214ENST00000496071 COL27A1Q8IZC6 1860 aaPredicted RBP16.9■□□□□ 0.3
COMMD3-214ENST00000496071 GPR89AB7ZAQ6 455 aa16.9■□□□□ 0.3
COMMD3-214ENST00000496071 TMX2-CTNND1H3BSU7 103 aa16.9■□□□□ 0.3
COMMD3-214ENST00000496071 DNAJC6O75061 913 aa16.9■□□□□ 0.3
COMMD3-214ENST00000496071 SLC25A14O95258 325 aaPredicted RBP16.9■□□□□ 0.3
COMMD3-214ENST00000496071 SLC4A1P02730 911 aa16.9■□□□□ 0.3
COMMD3-214ENST00000496071 GPR89BP0CG08 455 aa16.9■□□□□ 0.3
COMMD3-214ENST00000496071 ACTN2P35609 894 aa16.9■□□□□ 0.3
COMMD3-214ENST00000496071 ACTR1BP42025 376 aa16.9■□□□□ 0.3
COMMD3-214ENST00000496071 LSSP48449 732 aa16.9■□□□□ 0.3
COMMD3-214ENST00000496071 ACTR1AP61163 376 aa16.9■□□□□ 0.3
COMMD3-214ENST00000496071 CCL7P80098 99 aa16.9■□□□□ 0.3
COMMD3-214ENST00000496071 ALS2CLQ60I27 953 aa16.9■□□□□ 0.3
COMMD3-214ENST00000496071 SLC25A41Q8N5S1 370 aa16.9■□□□□ 0.3
COMMD3-214ENST00000496071 DTX3LQ8TDB6 740 aa16.9■□□□□ 0.3
COMMD3-214ENST00000496071 LRRC45Q96CN5 670 aa16.9■□□□□ 0.3
COMMD3-214ENST00000496071 LRRN3Q9H3W5 708 aa16.9■□□□□ 0.3
COMMD3-214ENST00000496071 SYNDIG1Q9H7V2 258 aa16.9■□□□□ 0.3
COMMD3-214ENST00000496071 POLR1BQ9H9Y6 1135 aa16.9■□□□□ 0.3
COMMD3-214ENST00000496071 TRIM39Q9HCM9 518 aa16.9■□□□□ 0.3
COMMD3-214ENST00000496071 RABGEF1Q9UJ41 708 aa16.9■□□□□ 0.3
COMMD3-214ENST00000496071 GUCA1BQ9UMX6 200 aa16.9■□□□□ 0.3
COMMD3-214ENST00000496071 RAXQ9Y2V3 346 aa16.9■□□□□ 0.3
COMMD3-214ENST00000496071 SPO11Q9Y5K1 396 aa16.9■□□□□ 0.3
COMMD3-214ENST00000496071 ENTPD2Q9Y5L3 495 aa16.9■□□□□ 0.3
COMMD3-214ENST00000496071 OAS3Q9Y6K5 1087 aaKnown RBP16.9■□□□□ 0.3
COMMD3-214ENST00000496071 CAPN6Q9Y6Q1 641 aa16.9■□□□□ 0.3
COMMD3-214ENST00000496071 RNF215Q9Y6U7 377 aa16.9■□□□□ 0.3
COMMD3-214ENST00000496071 ZFC3H1O60293 1989 aaKnown RBP16.89■□□□□ 0.3
COMMD3-214ENST00000496071 F5H423 210 aaPredicted RBP16.89■□□□□ 0.29
COMMD3-214ENST00000496071 NUAK1O60285 661 aa16.89■□□□□ 0.29
COMMD3-214ENST00000496071 RPLP0P05388 317 aaKnown RBP16.89■□□□□ 0.29
COMMD3-214ENST00000496071 BPIP17213 487 aa16.89■□□□□ 0.29
COMMD3-214ENST00000496071 BIRC2Q13490 618 aa16.89■□□□□ 0.29
COMMD3-214ENST00000496071 PHYKPLQ8IUZ5 450 aa16.89■□□□□ 0.29
COMMD3-214ENST00000496071 CCNJLQ8IV13 435 aa16.89■□□□□ 0.29
COMMD3-214ENST00000496071 NAGSQ8N159 534 aa16.89■□□□□ 0.29
COMMD3-214ENST00000496071 GLYATL1Q969I3 302 aa16.89■□□□□ 0.29
COMMD3-214ENST00000496071 SPATA13Q96N96 652 aa16.89■□□□□ 0.29
COMMD3-214ENST00000496071 VPS35Q96QK1 796 aa16.89■□□□□ 0.29
COMMD3-214ENST00000496071 SSUH2Q9Y2M2 353 aa16.89■□□□□ 0.29
COMMD3-214ENST00000496071 PLEKHM1Q9Y4G2 1056 aa16.89■□□□□ 0.29
COMMD3-214ENST00000496071 ST14Q9Y5Y6 855 aa16.89■□□□□ 0.29
COMMD3-214ENST00000496071 SCN8AQ9UQD0 1980 aa16.89■□□□□ 0.29
COMMD3-214ENST00000496071 A0A1W2PQM1 296 aa16.88■□□□□ 0.29
COMMD3-214ENST00000496071 C5orf60A6NFR6 353 aa16.88■□□□□ 0.29
COMMD3-214ENST00000496071 RHPN2P1A8MT19 583 aa16.88■□□□□ 0.29
COMMD3-214ENST00000496071 AURKAO14965 403 aa16.88■□□□□ 0.29
COMMD3-214ENST00000496071 NRDCO43847 1150 aa16.88■□□□□ 0.29
COMMD3-214ENST00000496071 BRINP1O60477 761 aa16.88■□□□□ 0.29
COMMD3-214ENST00000496071 PPFIA2O75334 1257 aa16.88■□□□□ 0.29
COMMD3-214ENST00000496071 DXOO77932 396 aaKnown RBP16.88■□□□□ 0.29
COMMD3-214ENST00000496071 ECEL1O95672 775 aa16.88■□□□□ 0.29
COMMD3-214ENST00000496071 CHRNA4P43681 627 aa16.88■□□□□ 0.29
COMMD3-214ENST00000496071 GABREP78334 506 aa16.88■□□□□ 0.29
COMMD3-214ENST00000496071 KLF1Q13351 362 aaPredicted RBP16.88■□□□□ 0.29
COMMD3-214ENST00000496071 RANBP10Q6VN20 620 aa16.88■□□□□ 0.29
COMMD3-214ENST00000496071 ZNF662Q6ZS27 426 aa16.88■□□□□ 0.29
COMMD3-214ENST00000496071 CHST15Q7LFX5 561 aaPredicted RBP16.88■□□□□ 0.29
COMMD3-214ENST00000496071 GLT6D1Q7Z4J2 308 aa16.88■□□□□ 0.29
COMMD3-214ENST00000496071 SPRED1Q7Z699 444 aa16.88■□□□□ 0.29
COMMD3-214ENST00000496071 SFTPA2Q8IWL1 248 aa16.88■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms